Gene annotation
Transcriptome id Sobic.001G091701.1
Synonym -
Functional annotation -
UniProt A0A1Z5S4Y6
Pfam -
Panther DB PTHR11594 PTHR11594:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006412; translation GO:0005840ribosome GO:0005622intracellular GO:0003735structural constituent of ribosome


Orthologs (automatic annotation)
TAIR AT3G61110 : ribosomal protein S27
RAP-DB (Rice) LOC_Os04g27860.1 : 40S ribosomal protein S27, putative, expressed
MaizeGDB (Corn) Zm00025a016818
Brachypodium -
Barley HORVU7Hr1G112740.4 , HORVU7Hr1G112740.5 , HORVU7Hr1G112740.2 , HORVU7Hr1G112740.1
Wheat TraesCS7A02G501300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G217800 ras-related protein, putative, expressed K07936: GTP-binding nuclear protein Ran
2 Sobic.004G062600 OsFBX154 - F-box domain containing protein, expressed -
3 Sobic.005G048600 expressed protein -
4 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase
5 Sobic.009G220700 - -
6 Sobic.003G423700 endonuclease, putative, expressed K08991: crossover junction endonuclease MUS81
7 Sobic.010G182000 26S protease regulatory subunit, putative, expressed K03066: PSMC5, 26S proteasome regulatory subunit T6
8 Sobic.007G102300 formin, putative, expressed -
9 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
10 Sobic.001G218600 MATH domain containing protein, expressed -
11 Sobic.001G080800 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
12 Sobic.001G073700 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
13 Sobic.001G131900 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
14 Sobic.001G506400 expressed protein -
15 Sobic.003G352900 OsFtsH3 FtsH protease, homologue of AtFtsH3/10, expressed K08956: AFG3 family protein
16 Sobic.003G214850 - -
17 Sobic.001G192700 major facilitator superfamily domain-containing protein 5, putative, expressed -
18 Sobic.006G050100 expressed protein -
19 Sobic.008G156600 Leucine Rich Repeat family protein, expressed -
20 Sobic.007G144100 eukaryotic translation initiation factor 3 subunit C, putative, expressed K03252: translation initiation factor 3 subunit C


Gene co-expression network
sample Sobic001G091701 Sobic001G091701 Sobic003G217800 Sobic003G217800 Sobic001G091701--Sobic003G217800 Sobic004G062600 Sobic004G062600 Sobic001G091701--Sobic004G062600 Sobic005G048600 Sobic005G048600 Sobic001G091701--Sobic005G048600 Sobic003G293400 Sobic003G293400 Sobic001G091701--Sobic003G293400 Sobic009G220700 Sobic009G220700 Sobic001G091701--Sobic009G220700 Sobic003G423700 Sobic003G423700 Sobic001G091701--Sobic003G423700 Sobic010G182000 Sobic010G182000 Sobic001G091701--Sobic010G182000 Sobic007G102300 Sobic007G102300 Sobic001G091701--Sobic007G102300 Sobic001G352800 Sobic001G352800 Sobic001G091701--Sobic001G352800 Sobic007G144100 Sobic007G144100 Sobic003G217800--Sobic007G144100 Sobic003G258100 Sobic003G258100 Sobic003G217800--Sobic003G258100 Sobic003G352900 Sobic003G352900 Sobic003G217800--Sobic003G352900 Sobic002G299500 Sobic002G299500 Sobic003G217800--Sobic002G299500 Sobic003G018000 Sobic003G018000 Sobic003G217800--Sobic003G018000 Sobic001G485700 Sobic001G485700 Sobic003G217800--Sobic001G485700 Sobic003G217800--Sobic009G220700 Sobic003G217800--Sobic004G062600 Sobic010G263400 Sobic010G263400 Sobic003G217800--Sobic010G263400 Sobic004G062600--Sobic003G217800 Sobic003G200000 Sobic003G200000 Sobic004G062600--Sobic003G200000 Sobic004G062600--Sobic010G263400 Sobic004G062600--Sobic007G102300 Sobic005G045800 Sobic005G045800 Sobic004G062600--Sobic005G045800 Sobic004G062600--Sobic003G258100 Sobic004G062600--Sobic003G352900 Sobic004G062600--Sobic001G091701 Sobic004G062600--Sobic002G299500 Sobic007G086600 Sobic007G086600 Sobic005G048600--Sobic007G086600 Sobic005G048600--Sobic003G352900 Sobic001G073700 Sobic001G073700 Sobic005G048600--Sobic001G073700 Sobic005G048600--Sobic003G293400 Sobic001G076600 Sobic001G076600 Sobic005G048600--Sobic001G076600 Sobic005G048600--Sobic003G217800 Sobic005G048600--Sobic007G144100 Sobic005G060100 Sobic005G060100 Sobic005G048600--Sobic005G060100 Sobic005G048600--Sobic005G045800 Sobic001G131900 Sobic001G131900 Sobic003G293400--Sobic001G131900 Sobic003G293400--Sobic003G352900 Sobic004G198300 Sobic004G198300 Sobic003G293400--Sobic004G198300 Sobic003G293400--Sobic001G076600 Sobic002G420100 Sobic002G420100 Sobic003G293400--Sobic002G420100 Sobic004G038400 Sobic004G038400 Sobic003G293400--Sobic004G038400 Sobic004G026600 Sobic004G026600 Sobic003G293400--Sobic004G026600 Sobic004G298600 Sobic004G298600 Sobic003G293400--Sobic004G298600 Sobic003G293400--Sobic007G144100 Sobic008G156600 Sobic008G156600 Sobic009G220700--Sobic008G156600 Sobic009G163100 Sobic009G163100 Sobic009G220700--Sobic009G163100 Sobic001G072000 Sobic001G072000 Sobic009G220700--Sobic001G072000 Sobic009G220700--Sobic003G217800 Sobic001G322400 Sobic001G322400 Sobic009G220700--Sobic001G322400 Sobic009G220700--Sobic001G485700 Sobic010G073900 Sobic010G073900 Sobic009G220700--Sobic010G073900 Sobic009G220700--Sobic003G352900 Sobic009G025700 Sobic009G025700 Sobic009G220700--Sobic009G025700 Sobic001G126800 Sobic001G126800 Sobic003G423700--Sobic001G126800 Sobic004G241300 Sobic004G241300 Sobic003G423700--Sobic004G241300 Sobic008G104000 Sobic008G104000 Sobic003G423700--Sobic008G104000 Sobic003G423700--Sobic008G156600 Sobic003G423700--Sobic002G420100 Sobic003G423700--Sobic009G163100 Sobic003G423700--Sobic010G182000 Sobic008G171900 Sobic008G171900 Sobic003G423700--Sobic008G171900 Sobic010G253200 Sobic010G253200 Sobic003G423700--Sobic010G253200 Sobic010G182000--Sobic002G420100 Sobic010G182000--Sobic003G423700 Sobic010G182000--Sobic008G156600 Sobic010G182000--Sobic008G104000 Sobic010G182000--Sobic001G072000 Sobic010G182000--Sobic009G163100 Sobic001G400000 Sobic001G400000 Sobic010G182000--Sobic001G400000 Sobic002G172401 Sobic002G172401 Sobic010G182000--Sobic002G172401 Sobic005G050400 Sobic005G050400 Sobic010G182000--Sobic005G050400 Sobic009G214500 Sobic009G214500 Sobic007G102300--Sobic009G214500 Sobic007G102300--Sobic005G060100 Sobic001G385300 Sobic001G385300 Sobic007G102300--Sobic001G385300 Sobic007G102300--Sobic009G220700 Sobic007G102300--Sobic003G217800 Sobic007G102300--Sobic003G352900 Sobic003G216600 Sobic003G216600 Sobic007G102300--Sobic003G216600 Sobic007G102300--Sobic002G299500 Sobic003G005500 Sobic003G005500 Sobic007G102300--Sobic003G005500 Sobic001G219800 Sobic001G219800 Sobic001G352800--Sobic001G219800 Sobic002G232400 Sobic002G232400 Sobic001G352800--Sobic002G232400 Sobic002G255400 Sobic002G255400 Sobic001G352800--Sobic002G255400 Sobic003G260600 Sobic003G260600 Sobic001G352800--Sobic003G260600 Sobic003G075200 Sobic003G075200 Sobic001G352800--Sobic003G075200 Sobic003G085500 Sobic003G085500 Sobic001G352800--Sobic003G085500 Sobic002G090500 Sobic002G090500 Sobic001G352800--Sobic002G090500 Sobic001G192700 Sobic001G192700 Sobic001G352800--Sobic001G192700 Sobic001G352800--Sobic001G126800
Octagon: transcription factors


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