Gene annotation
Transcriptome id Sobic.006G271000.1
Synonym ATMIS12, Sb06g033240, MIS12
Functional annotation mis12 protein, expressed
UniProt C5YAM2
Pfam PF05859
Panther DB PTHR14527
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007067; mitotic cell cycle GO:0007049cell cycle GO:0005634nucleus GO:0000775chromosome, centromeric region


Orthologs (automatic annotation)
TAIR AT5G35520 : minichromosome instability 12 (mis12)-like
RAP-DB (Rice) LOC_Os02g40680.1 : mis12 protein, expressed
MaizeGDB (Corn) Zm00025a009258 , Zm00025a057402
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
2 Sobic.002G153400 meiotic coiled-coil protein 7, putative, expressed -
3 Sobic.009G220000 threonine synthase, chloroplast precursor, putative, expressed K01733: threonine synthase
4 Sobic.001G135200 OB-fold nucleic acid binding domain containing protein, putative, expressed K15365: RecQ-mediated genome instability protein 2
5 Sobic.001G192700 major facilitator superfamily domain-containing protein 5, putative, expressed -
6 Sobic.001G286100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
7 Sobic.010G002800 AGAP000326-PA, putative, expressed K18163: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
8 Sobic.001G348000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@nodulation protein-related, putative, expressed -
9 Sobic.005G210500 - K10901: BLM, RECQL3, bloom syndrome protein
10 Sobic.002G232400 clathrin adaptor complex small chain domain containing protein, expressed -
11 Sobic.004G069400 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial
12 Sobic.004G186100 expressed protein -
13 Sobic.001G347700 protein phosphotase protein, putative, expressed -
14 Sobic.003G418400 expressed protein -
15 Sobic.001G486600 RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed K10755: replication factor C subunit 2/4
16 Sobic.009G131200 expressed protein -
17 Sobic.002G387800 - K12456: anaphase-promoting complex subunit 13
18 Sobic.002G268700 hydroxymethylglutaryl-CoA synthase, putative, expressed K01641: hydroxymethylglutaryl-CoA synthase
19 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2
20 Sobic.009G206600 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20


Gene co-expression network
sample Sobic006G271000 Sobic006G271000 Sobic001G352800 Sobic001G352800 Sobic006G271000--Sobic001G352800 Sobic002G153400 Sobic002G153400 Sobic006G271000--Sobic002G153400 Sobic009G220000 Sobic009G220000 Sobic006G271000--Sobic009G220000 Sobic001G135200 Sobic001G135200 Sobic006G271000--Sobic001G135200 Sobic001G192700 Sobic001G192700 Sobic006G271000--Sobic001G192700 Sobic001G286100 Sobic001G286100 Sobic006G271000--Sobic001G286100 Sobic010G002800 Sobic010G002800 Sobic006G271000--Sobic010G002800 Sobic001G348000 Sobic001G348000 Sobic006G271000--Sobic001G348000 Sobic005G210500 Sobic005G210500 Sobic006G271000--Sobic005G210500 Sobic001G219800 Sobic001G219800 Sobic001G352800--Sobic001G219800 Sobic002G232400 Sobic002G232400 Sobic001G352800--Sobic002G232400 Sobic002G255400 Sobic002G255400 Sobic001G352800--Sobic002G255400 Sobic003G260600 Sobic003G260600 Sobic001G352800--Sobic003G260600 Sobic003G075200 Sobic003G075200 Sobic001G352800--Sobic003G075200 Sobic003G085500 Sobic003G085500 Sobic001G352800--Sobic003G085500 Sobic002G090500 Sobic002G090500 Sobic001G352800--Sobic002G090500 Sobic001G352800--Sobic001G192700 Sobic001G126800 Sobic001G126800 Sobic001G352800--Sobic001G126800 Sobic001G117900 Sobic001G117900 Sobic002G153400--Sobic001G117900 Sobic002G153400--Sobic001G352800 Sobic001G485300 Sobic001G485300 Sobic002G153400--Sobic001G485300 Sobic002G153400--Sobic001G192700 Sobic002G308000 Sobic002G308000 Sobic002G153400--Sobic002G308000 Sobic001G191900 Sobic001G191900 Sobic002G153400--Sobic001G191900 Sobic002G153400--Sobic006G271000 Sobic005G060100 Sobic005G060100 Sobic002G153400--Sobic005G060100 Sobic003G418400 Sobic003G418400 Sobic002G153400--Sobic003G418400 Sobic007G048700 Sobic007G048700 Sobic009G220000--Sobic007G048700 Sobic009G220000--Sobic003G075200 Sobic004G069400 Sobic004G069400 Sobic009G220000--Sobic004G069400 Sobic009G220000--Sobic006G271000 Sobic003G261100 Sobic003G261100 Sobic009G220000--Sobic003G261100 Sobic004G356300 Sobic004G356300 Sobic009G220000--Sobic004G356300 Sobic002G352200 Sobic002G352200 Sobic009G220000--Sobic002G352200 Sobic004G007700 Sobic004G007700 Sobic009G220000--Sobic004G007700 Sobic009G220000--Sobic001G135200 Sobic003G044700 Sobic003G044700 Sobic001G135200--Sobic003G044700 Sobic001G135200--Sobic001G192700 Sobic003G016300 Sobic003G016300 Sobic001G135200--Sobic003G016300 Sobic004G261800 Sobic004G261800 Sobic001G135200--Sobic004G261800 Sobic001G135200--Sobic002G352200 Sobic004G100100 Sobic004G100100 Sobic001G135200--Sobic004G100100 Sobic009G244900 Sobic009G244900 Sobic001G135200--Sobic009G244900 Sobic005G185200 Sobic005G185200 Sobic001G135200--Sobic005G185200 Sobic001G135200--Sobic006G271000 Sobic001G192700--Sobic001G219800 Sobic001G192700--Sobic003G016300 Sobic001G192700--Sobic001G352800 Sobic001G192700--Sobic002G232400 Sobic001G192700--Sobic001G135200 Sobic001G192700--Sobic001G348000 Sobic004G117400 Sobic004G117400 Sobic001G192700--Sobic004G117400 Sobic001G091701 Sobic001G091701 Sobic001G192700--Sobic001G091701 Sobic002G387800 Sobic002G387800 Sobic001G192700--Sobic002G387800 Sobic001G286100--Sobic004G069400 Sobic008G118300 Sobic008G118300 Sobic001G286100--Sobic008G118300 Sobic001G286100--Sobic003G418400 Sobic007G201000 Sobic007G201000 Sobic001G286100--Sobic007G201000 Sobic010G250000 Sobic010G250000 Sobic001G286100--Sobic010G250000 Sobic001G286100--Sobic001G135200 Sobic001G286100--Sobic006G271000 Sobic009G063800 Sobic009G063800 Sobic001G286100--Sobic009G063800 Sobic001G309200 Sobic001G309200 Sobic001G286100--Sobic001G309200 Sobic010G002800--Sobic001G352800 Sobic010G002800--Sobic003G085500 Sobic003G388700 Sobic003G388700 Sobic010G002800--Sobic003G388700 Sobic010G002800--Sobic002G232400 Sobic010G002800--Sobic001G309200 Sobic004G186100 Sobic004G186100 Sobic010G002800--Sobic004G186100 Sobic002G222200 Sobic002G222200 Sobic010G002800--Sobic002G222200 Sobic001G073600 Sobic001G073600 Sobic010G002800--Sobic001G073600 Sobic010G002800--Sobic004G007700 Sobic002G268700 Sobic002G268700 Sobic001G348000--Sobic002G268700 Sobic001G348000--Sobic001G192700 Sobic001G348000--Sobic007G048700 Sobic008G132200 Sobic008G132200 Sobic001G348000--Sobic008G132200 Sobic001G347700 Sobic001G347700 Sobic001G348000--Sobic001G347700 Sobic001G348000--Sobic005G210500 Sobic001G348000--Sobic002G232400 Sobic001G348000--Sobic006G271000 Sobic001G348000--Sobic001G286100 Sobic005G210500--Sobic003G418400 Sobic001G486600 Sobic001G486600 Sobic005G210500--Sobic001G486600 Sobic009G214500 Sobic009G214500 Sobic005G210500--Sobic009G214500 Sobic010G038200 Sobic010G038200 Sobic005G210500--Sobic010G038200 Sobic005G210500--Sobic001G117900 Sobic003G005500 Sobic003G005500 Sobic005G210500--Sobic003G005500 Sobic010G252200 Sobic010G252200 Sobic005G210500--Sobic010G252200 Sobic007G102300 Sobic007G102300 Sobic005G210500--Sobic007G102300 Sobic010G030000 Sobic010G030000 Sobic005G210500--Sobic010G030000
Octagon: transcription factors


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