Gene annotation
Transcriptome id Sobic.004G186100.1,Sobic.004G186100.2
Synonym Sb04g023490
Functional annotation expressed protein
UniProt C5XVK0
Pfam -
Panther DB PTHR37237
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08240 : -
RAP-DB (Rice) LOC_Os02g35890.1 : expressed protein
MaizeGDB (Corn) Zm00025a020756
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G002800 AGAP000326-PA, putative, expressed K18163: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
2 Sobic.009G206600 50S ribosomal protein L20, putative, expressed K02887: RP-L20, MRPL20, large subunit ribosomal protein L20
3 Sobic.007G022700 proteasome subunit, putative, expressed K12177: COPS3, COP9 signalosome complex subunit 3
4 Sobic.010G258000 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
5 Sobic.007G003100 transmembrane protein 18, putative, expressed -
6 Sobic.003G222700 similar to DEAD-box ATP-dependent RNA helicase 26(PubMedID : 29862293)@- K17679: ATP-dependent RNA helicase MSS116, mitochondrial
7 Sobic.001G073600 4Fe-4S binding domain containing protein, expressed K03941: NADH dehydrogenase (ubiquinone) Fe-S protein 8
8 Sobic.006G203900 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
9 Sobic.003G085500 signal peptidase complex subunit 3, putative, expressed K12948: SPCS3, signal peptidase complex subunit 3
10 Sobic.006G271000 mis12 protein, expressed -
11 Sobic.007G048700 stomatin-like protein 2, putative, expressed -
12 Sobic.001G347700 protein phosphotase protein, putative, expressed -
13 Sobic.010G250000 60S ribosomal protein L8, putative, expressed -
14 Sobic.001G035400 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
15 Sobic.010G040900 trafficking protein particle complex subunit 4, putative, expressed -
16 Sobic.003G388700 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
17 Sobic.002G153400 meiotic coiled-coil protein 7, putative, expressed -
18 Sobic.004G256300 RNA polymerase Rpb4, putative, expressed K03012: RPB4, DNA-directed RNA polymerase II subunit RPB4
19 Sobic.001G352800 peptidase, T1 family, putative, expressed K02726: 20S proteasome subunit alpha 2
20 Sobic.001G485300 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta


Gene co-expression network
sample Sobic004G186100 Sobic004G186100 Sobic010G002800 Sobic010G002800 Sobic004G186100--Sobic010G002800 Sobic009G206600 Sobic009G206600 Sobic004G186100--Sobic009G206600 Sobic007G022700 Sobic007G022700 Sobic004G186100--Sobic007G022700 Sobic010G258000 Sobic010G258000 Sobic004G186100--Sobic010G258000 Sobic007G003100 Sobic007G003100 Sobic004G186100--Sobic007G003100 Sobic003G222700 Sobic003G222700 Sobic004G186100--Sobic003G222700 Sobic001G073600 Sobic001G073600 Sobic004G186100--Sobic001G073600 Sobic006G203900 Sobic006G203900 Sobic004G186100--Sobic006G203900 Sobic003G085500 Sobic003G085500 Sobic004G186100--Sobic003G085500 Sobic001G352800 Sobic001G352800 Sobic010G002800--Sobic001G352800 Sobic010G002800--Sobic003G085500 Sobic003G388700 Sobic003G388700 Sobic010G002800--Sobic003G388700 Sobic002G232400 Sobic002G232400 Sobic010G002800--Sobic002G232400 Sobic001G309200 Sobic001G309200 Sobic010G002800--Sobic001G309200 Sobic010G002800--Sobic004G186100 Sobic002G222200 Sobic002G222200 Sobic010G002800--Sobic002G222200 Sobic010G002800--Sobic001G073600 Sobic004G007700 Sobic004G007700 Sobic010G002800--Sobic004G007700 Sobic004G039400 Sobic004G039400 Sobic009G206600--Sobic004G039400 Sobic002G387800 Sobic002G387800 Sobic009G206600--Sobic002G387800 Sobic009G206600--Sobic001G073600 Sobic009G206600--Sobic006G203900 Sobic009G206600--Sobic003G388700 Sobic009G206600--Sobic004G186100 Sobic009G206600--Sobic007G003100 Sobic008G018300 Sobic008G018300 Sobic009G206600--Sobic008G018300 Sobic002G217500 Sobic002G217500 Sobic009G206600--Sobic002G217500 Sobic004G256300 Sobic004G256300 Sobic007G022700--Sobic004G256300 Sobic007G022700--Sobic003G222700 Sobic007G022700--Sobic003G085500 Sobic007G022700--Sobic002G232400 Sobic009G207200 Sobic009G207200 Sobic007G022700--Sobic009G207200 Sobic007G022700--Sobic004G186100 Sobic001G191900 Sobic001G191900 Sobic007G022700--Sobic001G191900 Sobic006G259900 Sobic006G259900 Sobic007G022700--Sobic006G259900 Sobic003G005900 Sobic003G005900 Sobic007G022700--Sobic003G005900 Sobic001G473400 Sobic001G473400 Sobic010G258000--Sobic001G473400 Sobic010G258000--Sobic006G203900 Sobic001G035400 Sobic001G035400 Sobic010G258000--Sobic001G035400 Sobic010G258000--Sobic001G073600 Sobic010G258000--Sobic003G388700 Sobic009G016500 Sobic009G016500 Sobic010G258000--Sobic009G016500 Sobic003G170300 Sobic003G170300 Sobic010G258000--Sobic003G170300 Sobic008G136800 Sobic008G136800 Sobic010G258000--Sobic008G136800 Sobic007G119600 Sobic007G119600 Sobic010G258000--Sobic007G119600 Sobic007G003100--Sobic004G039400 Sobic007G048700 Sobic007G048700 Sobic007G003100--Sobic007G048700 Sobic003G167000 Sobic003G167000 Sobic007G003100--Sobic003G167000 Sobic009G112900 Sobic009G112900 Sobic007G003100--Sobic009G112900 Sobic001G443200 Sobic001G443200 Sobic007G003100--Sobic001G443200 Sobic007G003100--Sobic009G206600 Sobic001G060300 Sobic001G060300 Sobic007G003100--Sobic001G060300 Sobic007G003100--Sobic006G203900 Sobic010G040900 Sobic010G040900 Sobic007G003100--Sobic010G040900 Sobic003G222700--Sobic004G256300 Sobic001G467100 Sobic001G467100 Sobic003G222700--Sobic001G467100 Sobic010G172400 Sobic010G172400 Sobic003G222700--Sobic010G172400 Sobic001G061200 Sobic001G061200 Sobic003G222700--Sobic001G061200 Sobic003G222700--Sobic007G022700 Sobic007G173700 Sobic007G173700 Sobic003G222700--Sobic007G173700 Sobic001G229300 Sobic001G229300 Sobic003G222700--Sobic001G229300 Sobic002G142700 Sobic002G142700 Sobic003G222700--Sobic002G142700 Sobic002G399900 Sobic002G399900 Sobic003G222700--Sobic002G399900 Sobic009G191400 Sobic009G191400 Sobic001G073600--Sobic009G191400 Sobic009G224400 Sobic009G224400 Sobic001G073600--Sobic009G224400 Sobic003G135600 Sobic003G135600 Sobic001G073600--Sobic003G135600 Sobic002G395000 Sobic002G395000 Sobic001G073600--Sobic002G395000 Sobic004G344800 Sobic004G344800 Sobic001G073600--Sobic004G344800 Sobic001G073600--Sobic007G119600 Sobic004G347600 Sobic004G347600 Sobic001G073600--Sobic004G347600 Sobic001G458800 Sobic001G458800 Sobic001G073600--Sobic001G458800 Sobic004G155100 Sobic004G155100 Sobic001G073600--Sobic004G155100 Sobic006G203900--Sobic008G136800 Sobic009G211900 Sobic009G211900 Sobic006G203900--Sobic009G211900 Sobic006G203900--Sobic001G035400 Sobic006G203900--Sobic001G073600 Sobic004G138300 Sobic004G138300 Sobic006G203900--Sobic004G138300 Sobic006G124300 Sobic006G124300 Sobic006G203900--Sobic006G124300 Sobic006G203900--Sobic003G135600 Sobic009G001900 Sobic009G001900 Sobic006G203900--Sobic009G001900 Sobic007G013900 Sobic007G013900 Sobic006G203900--Sobic007G013900 Sobic001G485300 Sobic001G485300 Sobic003G085500--Sobic001G485300 Sobic003G085500--Sobic001G352800 Sobic003G085500--Sobic010G002800 Sobic004G354100 Sobic004G354100 Sobic003G085500--Sobic004G354100 Sobic003G085500--Sobic007G022700 Sobic002G392400 Sobic002G392400 Sobic003G085500--Sobic002G392400 Sobic002G276800 Sobic002G276800 Sobic003G085500--Sobic002G276800 Sobic003G085500--Sobic003G388700 Sobic003G085500--Sobic004G186100
Octagon: transcription factors


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