Gene annotation
Transcriptome id Sobic.003G134500.1
Synonym Sb03g011440, CYC1BAT, CYCB1, 2
Functional annotation cyclin, putative, expressed
UniProt C5XHD2
Pfam PF02984 PF00134
Panther DB PTHR10177 PTHR10177:SF211
NCBI CDD KOG0653; Cyclin B and related kinase-activating proteins
KEGG Orthology K05868; G2/mitotic-specific cyclin-B1
Gene Ontology GO:0005634; nucleus


Orthologs (automatic annotation)
TAIR AT5G06150 : Cyclin family protein
RAP-DB (Rice) LOC_Os01g17402.1 : cyclin, putative, expressed
MaizeGDB (Corn) Zm00025a000959 , Zm00025a047525 , Zm00025a035184
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G246900 expressed protein -
2 Sobic.002G372200 hydrolase protein, putative, expressed -
3 Sobic.007G196800 UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
4 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase
5 Sobic.001G401600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
6 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
7 Sobic.001G175000 jmjC domain containing protein, expressed K15601: [histone H3]-dimethyl-L-lysine9 demethylase
8 Sobic.001G300400 expansin precursor, putative, expressed -
9 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.004G075900 CSLA1 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
11 Sobic.007G176800 acyl carrier protein, putative, expressed -
12 Sobic.004G285900 HMG1/2, putative, expressed -
13 Sobic.003G297200 lipase, putative, expressed -
14 Sobic.001G013400 nuf2 family protein, expressed -
15 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1
16 Sobic.006G081800 histone H3, putative, expressed K11253: histone H3
17 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
18 Sobic.001G091500 expressed protein -
19 Sobic.010G230000 monocopper oxidase, putative, expressed -
20 Sobic.006G138900 expressed protein -


Gene co-expression network
sample Sobic003G134500 Sobic003G134500 Sobic002G246900 Sobic002G246900 Sobic003G134500--Sobic002G246900 Sobic002G372200 Sobic002G372200 Sobic003G134500--Sobic002G372200 Sobic007G196800 Sobic007G196800 Sobic003G134500--Sobic007G196800 Sobic003G442300 Sobic003G442300 Sobic003G134500--Sobic003G442300 Sobic001G401600 Sobic001G401600 Sobic003G134500--Sobic001G401600 Sobic009G181500 Sobic009G181500 Sobic003G134500--Sobic009G181500 Sobic001G175000 Sobic001G175000 Sobic003G134500--Sobic001G175000 Sobic001G300400 Sobic001G300400 Sobic003G134500--Sobic001G300400 Sobic002G426800 Sobic002G426800 Sobic003G134500--Sobic002G426800 Sobic004G047100 Sobic004G047100 Sobic002G246900--Sobic004G047100 Sobic010G105400 Sobic010G105400 Sobic002G246900--Sobic010G105400 Sobic010G191000 Sobic010G191000 Sobic002G246900--Sobic010G191000 Sobic003G107200 Sobic003G107200 Sobic002G246900--Sobic003G107200 Sobic001G238900 Sobic001G238900 Sobic002G246900--Sobic001G238900 Sobic002G246900--Sobic009G181500 Sobic002G236700 Sobic002G236700 Sobic002G246900--Sobic002G236700 Sobic001G169800 Sobic001G169800 Sobic002G246900--Sobic001G169800 Sobic002G230800 Sobic002G230800 Sobic002G246900--Sobic002G230800 Sobic002G372200--Sobic003G134500 Sobic010G230000 Sobic010G230000 Sobic002G372200--Sobic010G230000 Sobic006G218600 Sobic006G218600 Sobic002G372200--Sobic006G218600 Sobic007G214700 Sobic007G214700 Sobic002G372200--Sobic007G214700 Sobic007G176800 Sobic007G176800 Sobic002G372200--Sobic007G176800 Sobic009G088700 Sobic009G088700 Sobic002G372200--Sobic009G088700 Sobic002G372200--Sobic001G300400 Sobic001G108100 Sobic001G108100 Sobic002G372200--Sobic001G108100 Sobic004G238700 Sobic004G238700 Sobic002G372200--Sobic004G238700 Sobic007G196800--Sobic003G134500 Sobic004G229200 Sobic004G229200 Sobic007G196800--Sobic004G229200 Sobic001G091500 Sobic001G091500 Sobic007G196800--Sobic001G091500 Sobic001G069700 Sobic001G069700 Sobic007G196800--Sobic001G069700 Sobic003G084100 Sobic003G084100 Sobic007G196800--Sobic003G084100 Sobic007G196800--Sobic003G442300 Sobic010G092400 Sobic010G092400 Sobic007G196800--Sobic010G092400 Sobic002G151400 Sobic002G151400 Sobic007G196800--Sobic002G151400 Sobic007G196800--Sobic001G401600 Sobic003G442300--Sobic001G401600 Sobic003G442300--Sobic002G246900 Sobic003G442300--Sobic006G218600 Sobic003G442300--Sobic009G181500 Sobic001G521100 Sobic001G521100 Sobic003G442300--Sobic001G521100 Sobic010G051100 Sobic010G051100 Sobic003G442300--Sobic010G051100 Sobic001G025900 Sobic001G025900 Sobic003G442300--Sobic001G025900 Sobic003G442300--Sobic007G176800 Sobic006G102900 Sobic006G102900 Sobic003G442300--Sobic006G102900 Sobic001G401600--Sobic003G442300 Sobic001G401600--Sobic009G181500 Sobic001G401600--Sobic002G246900 Sobic001G401600--Sobic006G102900 Sobic001G401600--Sobic004G047100 Sobic001G401600--Sobic010G051100 Sobic003G444200 Sobic003G444200 Sobic001G401600--Sobic003G444200 Sobic001G401600--Sobic010G105400 Sobic003G410600 Sobic003G410600 Sobic001G401600--Sobic003G410600 Sobic009G181500--Sobic002G426800 Sobic009G181500--Sobic004G047100 Sobic009G181500--Sobic010G051100 Sobic006G035600 Sobic006G035600 Sobic009G181500--Sobic006G035600 Sobic005G144600 Sobic005G144600 Sobic009G181500--Sobic005G144600 Sobic010G274000 Sobic010G274000 Sobic009G181500--Sobic010G274000 Sobic009G181500--Sobic006G102900 Sobic001G070300 Sobic001G070300 Sobic009G181500--Sobic001G070300 Sobic003G294500 Sobic003G294500 Sobic009G181500--Sobic003G294500 Sobic006G179200 Sobic006G179200 Sobic001G175000--Sobic006G179200 Sobic001G175000--Sobic002G246900 Sobic001G175000--Sobic001G521100 Sobic001G175000--Sobic010G105400 Sobic002G113400 Sobic002G113400 Sobic001G175000--Sobic002G113400 Sobic006G134200 Sobic006G134200 Sobic001G175000--Sobic006G134200 Sobic004G117300 Sobic004G117300 Sobic001G175000--Sobic004G117300 Sobic001G175000--Sobic003G134500 Sobic001G175000--Sobic004G047100 Sobic002G351100 Sobic002G351100 Sobic001G300400--Sobic002G351100 Sobic001G289900 Sobic001G289900 Sobic001G300400--Sobic001G289900 Sobic006G236800 Sobic006G236800 Sobic001G300400--Sobic006G236800 Sobic003G297200 Sobic003G297200 Sobic001G300400--Sobic003G297200 Sobic001G300400--Sobic004G047100 Sobic002G289800 Sobic002G289800 Sobic001G300400--Sobic002G289800 Sobic001G300400--Sobic002G426800 Sobic003G102000 Sobic003G102000 Sobic001G300400--Sobic003G102000 Sobic001G300400--Sobic001G091500 Sobic002G426800--Sobic009G181500 Sobic002G426800--Sobic001G091500 Sobic002G426800--Sobic005G144600 Sobic002G426800--Sobic004G047100 Sobic003G260700 Sobic003G260700 Sobic002G426800--Sobic003G260700 Sobic001G078600 Sobic001G078600 Sobic002G426800--Sobic001G078600 Sobic003G314900 Sobic003G314900 Sobic002G426800--Sobic003G314900 Sobic003G444100 Sobic003G444100 Sobic002G426800--Sobic003G444100 Sobic002G426800--Sobic010G105400
Octagon: transcription factors


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