Gene annotation
Transcriptome id Sobic.007G196800.1
Synonym Sb07g026520, GAE6
Functional annotation UDP-glucuronate 4-epimerase, putative, expressed
UniProt C5YI52
Pfam PF04321
Panther DB PTHR10366 PTHR10366:SF414
NCBI CDD KOG1371; UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase
KEGG Orthology K08679; UDP-glucuronate 4-epimerase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G23820 : UDP-D-glucuronate 4-epimerase 6
RAP-DB (Rice) LOC_Os08g41440.1 : UDP-glucuronate 4-epimerase, putative, expressed
MaizeGDB (Corn) Zm00025a022434 , Zm00025a042419 , Zm00025a047551 , Zm00025a049735 , Zm00025a030385 , Zm00025a005229 , Zm00025a032956
Brachypodium KQJ90895
Barley HORVU7Hr1G053260.9 , HORVU7Hr1G053260.8 , HORVU7Hr1G053260.5 , HORVU7Hr1G053260.4 , HORVU7Hr1G053260.7 , HORVU7Hr1G053260.6 , HORVU7Hr1G053260.1 , HORVU7Hr1G053260.3 , HORVU7Hr1G053260.2 , HORVU5Hr1G075660.1 , HORVU7Hr1G031270.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G134500 cyclin, putative, expressed K05868: G2/mitotic-specific cyclin-B1
2 Sobic.004G229200 phosphate-induced protein 1 conserved region domain containing protein, expressed -
3 Sobic.001G091500 expressed protein -
4 Sobic.001G069700 fatty acid hydroxylase, putative, expressed -
5 Sobic.003G084100 expressed protein -
6 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase
7 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
8 Sobic.002G151400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cyclin-dependent kinase G-1, putative, expressed K08818: cell division cycle 2-like
9 Sobic.001G401600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
10 Sobic.001G286400 - -
11 Sobic.003G387700 expressed protein -
12 Sobic.002G128000 receptor protein kinase, putative, expressed -
13 Sobic.003G444100 "OsCCS52B(Ortholog in rice:Su’udi et al., 2012)"(PubMedID : 31659875)@WD repeat-containing protein, putative, expressed K03364: cell division cycle 20-like protein 1, cofactor of APC complex
14 Sobic.002G426800 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.002G246900 expressed protein -
16 Sobic.004G075900 CSLA1 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
17 Sobic.004G063600 CYPRO4, putative, expressed -
18 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
19 Sobic.002G222500 lysM domain-containing GPI-anchored protein precursor, putative, expressed -
20 Sobic.004G047100 EH domain-containing protein 1, putative, expressed K12483: EH domain-containing protein 1


Gene co-expression network
sample Sobic007G196800 Sobic007G196800 Sobic003G134500 Sobic003G134500 Sobic007G196800--Sobic003G134500 Sobic004G229200 Sobic004G229200 Sobic007G196800--Sobic004G229200 Sobic001G091500 Sobic001G091500 Sobic007G196800--Sobic001G091500 Sobic001G069700 Sobic001G069700 Sobic007G196800--Sobic001G069700 Sobic003G084100 Sobic003G084100 Sobic007G196800--Sobic003G084100 Sobic003G442300 Sobic003G442300 Sobic007G196800--Sobic003G442300 Sobic010G092400 Sobic010G092400 Sobic007G196800--Sobic010G092400 Sobic002G151400 Sobic002G151400 Sobic007G196800--Sobic002G151400 Sobic001G401600 Sobic001G401600 Sobic007G196800--Sobic001G401600 Sobic002G246900 Sobic002G246900 Sobic003G134500--Sobic002G246900 Sobic002G372200 Sobic002G372200 Sobic003G134500--Sobic002G372200 Sobic003G134500--Sobic007G196800 Sobic003G134500--Sobic003G442300 Sobic003G134500--Sobic001G401600 Sobic009G181500 Sobic009G181500 Sobic003G134500--Sobic009G181500 Sobic001G175000 Sobic001G175000 Sobic003G134500--Sobic001G175000 Sobic001G300400 Sobic001G300400 Sobic003G134500--Sobic001G300400 Sobic002G426800 Sobic002G426800 Sobic003G134500--Sobic002G426800 Sobic006G081800 Sobic006G081800 Sobic004G229200--Sobic006G081800 Sobic010G246400 Sobic010G246400 Sobic004G229200--Sobic010G246400 Sobic010G269700 Sobic010G269700 Sobic004G229200--Sobic010G269700 Sobic002G289800 Sobic002G289800 Sobic004G229200--Sobic002G289800 Sobic003G316601 Sobic003G316601 Sobic004G229200--Sobic003G316601 Sobic001G116600 Sobic001G116600 Sobic004G229200--Sobic001G116600 Sobic010G230000 Sobic010G230000 Sobic004G229200--Sobic010G230000 Sobic002G128000 Sobic002G128000 Sobic004G229200--Sobic002G128000 Sobic004G075900 Sobic004G075900 Sobic004G229200--Sobic004G075900 Sobic001G091500--Sobic002G426800 Sobic003G387700 Sobic003G387700 Sobic001G091500--Sobic003G387700 Sobic009G120700 Sobic009G120700 Sobic001G091500--Sobic009G120700 Sobic003G260700 Sobic003G260700 Sobic001G091500--Sobic003G260700 Sobic004G047100 Sobic004G047100 Sobic001G091500--Sobic004G047100 Sobic002G222500 Sobic002G222500 Sobic001G091500--Sobic002G222500 Sobic004G339500 Sobic004G339500 Sobic001G091500--Sobic004G339500 Sobic010G119300 Sobic010G119300 Sobic001G091500--Sobic010G119300 Sobic004G198100 Sobic004G198100 Sobic001G091500--Sobic004G198100 Sobic006G218600 Sobic006G218600 Sobic001G069700--Sobic006G218600 Sobic009G131200 Sobic009G131200 Sobic001G069700--Sobic009G131200 Sobic001G069700--Sobic003G442300 Sobic003G336900 Sobic003G336900 Sobic001G069700--Sobic003G336900 Sobic008G004900 Sobic008G004900 Sobic001G069700--Sobic008G004900 Sobic004G063600 Sobic004G063600 Sobic001G069700--Sobic004G063600 Sobic002G322700 Sobic002G322700 Sobic001G069700--Sobic002G322700 Sobic001G069700--Sobic007G196800 Sobic009G136000 Sobic009G136000 Sobic001G069700--Sobic009G136000 Sobic008G125700 Sobic008G125700 Sobic003G084100--Sobic008G125700 Sobic003G084100--Sobic004G063600 Sobic003G084100--Sobic001G091500 Sobic004G237000 Sobic004G237000 Sobic003G084100--Sobic004G237000 Sobic001G393200 Sobic001G393200 Sobic003G084100--Sobic001G393200 Sobic003G084100--Sobic010G119300 Sobic008G114900 Sobic008G114900 Sobic003G084100--Sobic008G114900 Sobic003G010700 Sobic003G010700 Sobic003G084100--Sobic003G010700 Sobic001G496400 Sobic001G496400 Sobic003G084100--Sobic001G496400 Sobic003G442300--Sobic001G401600 Sobic003G442300--Sobic002G246900 Sobic003G442300--Sobic006G218600 Sobic003G442300--Sobic009G181500 Sobic001G521100 Sobic001G521100 Sobic003G442300--Sobic001G521100 Sobic010G051100 Sobic010G051100 Sobic003G442300--Sobic010G051100 Sobic001G025900 Sobic001G025900 Sobic003G442300--Sobic001G025900 Sobic007G176800 Sobic007G176800 Sobic003G442300--Sobic007G176800 Sobic006G102900 Sobic006G102900 Sobic003G442300--Sobic006G102900 Sobic007G116800 Sobic007G116800 Sobic010G092400--Sobic007G116800 Sobic005G062600 Sobic005G062600 Sobic010G092400--Sobic005G062600 Sobic003G085900 Sobic003G085900 Sobic010G092400--Sobic003G085900 Sobic007G007800 Sobic007G007800 Sobic010G092400--Sobic007G007800 Sobic009G184200 Sobic009G184200 Sobic010G092400--Sobic009G184200 Sobic010G092400--Sobic010G269700 Sobic007G087800 Sobic007G087800 Sobic010G092400--Sobic007G087800 Sobic010G092400--Sobic003G387700 Sobic008G070700 Sobic008G070700 Sobic010G092400--Sobic008G070700 Sobic002G151400--Sobic004G229200 Sobic002G151400--Sobic007G196800 Sobic002G151400--Sobic001G116600 Sobic006G189200 Sobic006G189200 Sobic002G151400--Sobic006G189200 Sobic001G404700 Sobic001G404700 Sobic002G151400--Sobic001G404700 Sobic001G108400 Sobic001G108400 Sobic002G151400--Sobic001G108400 Sobic002G151400--Sobic004G075900 Sobic002G151400--Sobic003G134500 Sobic002G151400--Sobic002G289800 Sobic001G401600--Sobic003G442300 Sobic001G401600--Sobic009G181500 Sobic001G401600--Sobic002G246900 Sobic001G401600--Sobic006G102900 Sobic001G401600--Sobic004G047100 Sobic001G401600--Sobic010G051100 Sobic003G444200 Sobic003G444200 Sobic001G401600--Sobic003G444200 Sobic010G105400 Sobic010G105400 Sobic001G401600--Sobic010G105400 Sobic003G410600 Sobic003G410600 Sobic001G401600--Sobic003G410600
Octagon: transcription factors


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