Gene annotation
Transcriptome id Sobic.002G128000.1
Synonym Sb02g011020
Functional annotation receptor protein kinase, putative, expressed
UniProt C5X578
Pfam PF03629
Panther DB PTHR31988 PTHR31988:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G34215 : Domain of unknown function (DUF303)
RAP-DB (Rice) LOC_Os03g64050.1 : receptor protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a045869
Brachypodium -
Barley HORVU7Hr1G002320.2 , HORVU7Hr1G002280.3 , HORVU7Hr1G002280.2 , HORVU7Hr1G002280.1
Wheat TraesCS5B02G560600 , TraesCS4A02G470700 , TraesCS4A02G318800 , TraesCS5D02G569600 , TraesCS7A02G021300
Populus -


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cDNA sequences
Sobic.002G128000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G085900 Glycosyl hydrolase. predicted target of sbi-miR-5568 and sbi-miR-6220 expressed in the stems of sweet sorghum(PubMedID : 26117170)@glycosyl hydrolase, family 31, putative, expressed K15925: alpha-D-xyloside xylohydrolase
2 Sobic.010G092400 glycosyl transferase 8 domain containing protein, putative, expressed -
3 Sobic.002G237000 fasciclin domain containing protein, expressed -
4 Sobic.004G327600 expressed protein -
5 Sobic.004G075900 CSLA1 - cellulose synthase-like family A@ mannan synthase, expressed K13680: beta-mannan synthase
6 Sobic.001G105800 OsFBX109 - F-box domain containing protein, expressed -
7 Sobic.004G229200 phosphate-induced protein 1 conserved region domain containing protein, expressed -
8 Sobic.002G289800 HMG1/2, putative, expressed -
9 Sobic.002G178800 ubiquitin fusion protein, putative, expressed K02927: RP-L40e, RPL40, ubiquitin-large subunit ribosomal protein L40e
10 Sobic.003G204200 AP2/B3 transcription factor(PubMedID : 27016024)@B3 DNA binding domain containing protein, expressed -
11 Sobic.001G300400 expansin precursor, putative, expressed -
12 Sobic.004G237000 down-regulated TF in developmental senescence(PubMedID : 27586543)@"PGL2(Ortholog in rice:Heang and Sassa, 2012b(PubMedID : 31659886)@helix-loop-helix DNA-binding domain containing protein, expressed -
13 Sobic.003G387700 expressed protein -
14 Sobic.007G007800 DNA repair metallo-beta-lactamase, putative, expressed K15340: DCLRE1A, SNM1A, DNA cross-link repair 1A protein
15 Sobic.010G230000 monocopper oxidase, putative, expressed -
16 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase
17 Sobic.003G316601 - -
18 Sobic.001G137800 ankyrin, putative, expressed -
19 Sobic.006G228000 glycine-rich protein 2, putative -
20 Sobic.006G081800 histone H3, putative, expressed K11253: histone H3


Gene co-expression network
sample Sobic002G128000 Sobic002G128000 Sobic003G085900 Sobic003G085900 Sobic002G128000--Sobic003G085900 Sobic010G092400 Sobic010G092400 Sobic002G128000--Sobic010G092400 Sobic002G237000 Sobic002G237000 Sobic002G128000--Sobic002G237000 Sobic004G327600 Sobic004G327600 Sobic002G128000--Sobic004G327600 Sobic004G075900 Sobic004G075900 Sobic002G128000--Sobic004G075900 Sobic001G105800 Sobic001G105800 Sobic002G128000--Sobic001G105800 Sobic004G229200 Sobic004G229200 Sobic002G128000--Sobic004G229200 Sobic002G289800 Sobic002G289800 Sobic002G128000--Sobic002G289800 Sobic002G178800 Sobic002G178800 Sobic002G128000--Sobic002G178800 Sobic006G107500 Sobic006G107500 Sobic003G085900--Sobic006G107500 Sobic002G360600 Sobic002G360600 Sobic003G085900--Sobic002G360600 Sobic004G237000 Sobic004G237000 Sobic003G085900--Sobic004G237000 Sobic003G085900--Sobic010G092400 Sobic002G430700 Sobic002G430700 Sobic003G085900--Sobic002G430700 Sobic007G147200 Sobic007G147200 Sobic003G085900--Sobic007G147200 Sobic006G163300 Sobic006G163300 Sobic003G085900--Sobic006G163300 Sobic003G046400 Sobic003G046400 Sobic003G085900--Sobic003G046400 Sobic003G316601 Sobic003G316601 Sobic003G085900--Sobic003G316601 Sobic007G116800 Sobic007G116800 Sobic010G092400--Sobic007G116800 Sobic005G062600 Sobic005G062600 Sobic010G092400--Sobic005G062600 Sobic010G092400--Sobic003G085900 Sobic007G007800 Sobic007G007800 Sobic010G092400--Sobic007G007800 Sobic009G184200 Sobic009G184200 Sobic010G092400--Sobic009G184200 Sobic010G269700 Sobic010G269700 Sobic010G092400--Sobic010G269700 Sobic007G087800 Sobic007G087800 Sobic010G092400--Sobic007G087800 Sobic003G387700 Sobic003G387700 Sobic010G092400--Sobic003G387700 Sobic008G070700 Sobic008G070700 Sobic010G092400--Sobic008G070700 Sobic006G228000 Sobic006G228000 Sobic002G237000--Sobic006G228000 Sobic001G137800 Sobic001G137800 Sobic002G237000--Sobic001G137800 Sobic001G216400 Sobic001G216400 Sobic002G237000--Sobic001G216400 Sobic009G075500 Sobic009G075500 Sobic002G237000--Sobic009G075500 Sobic007G043000 Sobic007G043000 Sobic002G237000--Sobic007G043000 Sobic001G235200 Sobic001G235200 Sobic002G237000--Sobic001G235200 Sobic003G204200 Sobic003G204200 Sobic002G237000--Sobic003G204200 Sobic004G234600 Sobic004G234600 Sobic002G237000--Sobic004G234600 Sobic003G092300 Sobic003G092300 Sobic002G237000--Sobic003G092300 Sobic004G327600--Sobic001G105800 Sobic004G327600--Sobic002G289800 Sobic004G327600--Sobic002G128000 Sobic004G327600--Sobic003G085900 Sobic004G327600--Sobic010G092400 Sobic001G289900 Sobic001G289900 Sobic004G327600--Sobic001G289900 Sobic004G327600--Sobic004G075900 Sobic004G327600--Sobic005G062600 Sobic003G444300 Sobic003G444300 Sobic004G327600--Sobic003G444300 Sobic001G142000 Sobic001G142000 Sobic004G075900--Sobic001G142000 Sobic004G075900--Sobic001G105800 Sobic004G075900--Sobic007G007800 Sobic001G013400 Sobic001G013400 Sobic004G075900--Sobic001G013400 Sobic004G331600 Sobic004G331600 Sobic004G075900--Sobic004G331600 Sobic007G100600 Sobic007G100600 Sobic004G075900--Sobic007G100600 Sobic004G075900--Sobic003G444300 Sobic001G456500 Sobic001G456500 Sobic004G075900--Sobic001G456500 Sobic004G075900--Sobic003G387700 Sobic001G105800--Sobic007G007800 Sobic002G223900 Sobic002G223900 Sobic001G105800--Sobic002G223900 Sobic001G105800--Sobic009G184200 Sobic001G105800--Sobic003G444300 Sobic001G105800--Sobic003G387700 Sobic001G083300 Sobic001G083300 Sobic001G105800--Sobic001G083300 Sobic001G105800--Sobic001G456500 Sobic010G105400 Sobic010G105400 Sobic001G105800--Sobic010G105400 Sobic009G172950 Sobic009G172950 Sobic001G105800--Sobic009G172950 Sobic006G081800 Sobic006G081800 Sobic004G229200--Sobic006G081800 Sobic010G246400 Sobic010G246400 Sobic004G229200--Sobic010G246400 Sobic004G229200--Sobic010G269700 Sobic004G229200--Sobic002G289800 Sobic004G229200--Sobic003G316601 Sobic001G116600 Sobic001G116600 Sobic004G229200--Sobic001G116600 Sobic010G230000 Sobic010G230000 Sobic004G229200--Sobic010G230000 Sobic004G229200--Sobic002G128000 Sobic004G229200--Sobic004G075900 Sobic002G289800--Sobic001G289900 Sobic007G017700 Sobic007G017700 Sobic002G289800--Sobic007G017700 Sobic002G289800--Sobic003G316601 Sobic002G289800--Sobic004G237000 Sobic002G289800--Sobic004G327600 Sobic007G132900 Sobic007G132900 Sobic002G289800--Sobic007G132900 Sobic010G222100 Sobic010G222100 Sobic002G289800--Sobic010G222100 Sobic001G300400 Sobic001G300400 Sobic002G289800--Sobic001G300400 Sobic002G289800--Sobic006G081800 Sobic002G078900 Sobic002G078900 Sobic002G178800--Sobic002G078900 Sobic010G048600 Sobic010G048600 Sobic002G178800--Sobic010G048600 Sobic001G459400 Sobic001G459400 Sobic002G178800--Sobic001G459400 Sobic002G178700 Sobic002G178700 Sobic002G178800--Sobic002G178700 Sobic001G459300 Sobic001G459300 Sobic002G178800--Sobic001G459300 Sobic001G106500 Sobic001G106500 Sobic002G178800--Sobic001G106500 Sobic002G178800--Sobic003G092300 Sobic003G006000 Sobic003G006000 Sobic002G178800--Sobic003G006000 Sobic001G456000 Sobic001G456000 Sobic002G178800--Sobic001G456000
Octagon: transcription factors


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