Gene annotation
Transcriptome id Sobic.006G095300.1
Synonym Sb06g018010
Functional annotation expressed protein
UniProt C5Y996
Pfam -
Panther DB PTHR36721
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium KQJ82796
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G506300 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
2 Sobic.003G041400 aminoacyl-tRNA synthetase, putative, expressed -
3 Sobic.001G196800 CAMK_CAMK_like.40 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
4 Sobic.006G127200 kelch repeat protein, putative, expressed -
5 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2
6 Sobic.010G165800 - -
7 Sobic.002G315400 expressed protein -
8 Sobic.010G257500 expressed protein -
9 Sobic.003G297200 lipase, putative, expressed -
10 Sobic.008G118300 expressed protein -
11 Sobic.003G109200 expressed protein -
12 Sobic.005G210500 - K10901: BLM, RECQL3, bloom syndrome protein
13 Sobic.007G112100 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
14 Sobic.010G222800 expressed protein -
15 Sobic.006G271000 mis12 protein, expressed -
16 Sobic.001G486600 RFC4 - Putative clamp loader of PCNA, replication factor C subunit 4, expressed K10755: replication factor C subunit 2/4
17 Sobic.004G117400 expressed protein -
18 Sobic.003G013800 expressed protein -
19 Sobic.002G037600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.009G131200 expressed protein -


Gene co-expression network
sample Sobic006G095300 Sobic006G095300 Sobic001G506300 Sobic001G506300 Sobic006G095300--Sobic001G506300 Sobic003G041400 Sobic003G041400 Sobic006G095300--Sobic003G041400 Sobic001G196800 Sobic001G196800 Sobic006G095300--Sobic001G196800 Sobic006G127200 Sobic006G127200 Sobic006G095300--Sobic006G127200 Sobic001G521100 Sobic001G521100 Sobic006G095300--Sobic001G521100 Sobic010G165800 Sobic010G165800 Sobic006G095300--Sobic010G165800 Sobic002G315400 Sobic002G315400 Sobic006G095300--Sobic002G315400 Sobic010G257500 Sobic010G257500 Sobic006G095300--Sobic010G257500 Sobic003G297200 Sobic003G297200 Sobic006G095300--Sobic003G297200 Sobic010G087100 Sobic010G087100 Sobic001G506300--Sobic010G087100 Sobic002G238800 Sobic002G238800 Sobic001G506300--Sobic002G238800 Sobic002G131100 Sobic002G131100 Sobic001G506300--Sobic002G131100 Sobic001G506300--Sobic006G095300 Sobic006G081700 Sobic006G081700 Sobic001G506300--Sobic006G081700 Sobic010G030000 Sobic010G030000 Sobic001G506300--Sobic010G030000 Sobic001G118800 Sobic001G118800 Sobic001G506300--Sobic001G118800 Sobic003G379900 Sobic003G379900 Sobic001G506300--Sobic003G379900 Sobic001G506300--Sobic010G257500 Sobic009G081800 Sobic009G081800 Sobic003G041400--Sobic009G081800 Sobic003G041400--Sobic006G095300 Sobic005G210500 Sobic005G210500 Sobic003G041400--Sobic005G210500 Sobic003G041400--Sobic006G127200 Sobic006G119300 Sobic006G119300 Sobic003G041400--Sobic006G119300 Sobic004G350200 Sobic004G350200 Sobic003G041400--Sobic004G350200 Sobic010G252200 Sobic010G252200 Sobic003G041400--Sobic010G252200 Sobic003G041400--Sobic010G257500 Sobic003G041400--Sobic001G521100 Sobic002G037600 Sobic002G037600 Sobic001G196800--Sobic002G037600 Sobic001G154200 Sobic001G154200 Sobic001G196800--Sobic001G154200 Sobic006G272300 Sobic006G272300 Sobic001G196800--Sobic006G272300 Sobic010G009600 Sobic010G009600 Sobic001G196800--Sobic010G009600 Sobic002G100600 Sobic002G100600 Sobic001G196800--Sobic002G100600 Sobic006G072400 Sobic006G072400 Sobic001G196800--Sobic006G072400 Sobic010G013400 Sobic010G013400 Sobic001G196800--Sobic010G013400 Sobic001G196800--Sobic006G095300 Sobic001G196800--Sobic010G257500 Sobic004G306100 Sobic004G306100 Sobic006G127200--Sobic004G306100 Sobic002G271400 Sobic002G271400 Sobic006G127200--Sobic002G271400 Sobic006G127200--Sobic010G257500 Sobic002G123600 Sobic002G123600 Sobic006G127200--Sobic002G123600 Sobic003G409600 Sobic003G409600 Sobic006G127200--Sobic003G409600 Sobic003G226700 Sobic003G226700 Sobic006G127200--Sobic003G226700 Sobic006G127200--Sobic009G081800 Sobic010G103500 Sobic010G103500 Sobic006G127200--Sobic010G103500 Sobic001G025900 Sobic001G025900 Sobic006G127200--Sobic001G025900 Sobic002G113400 Sobic002G113400 Sobic001G521100--Sobic002G113400 Sobic002G246900 Sobic002G246900 Sobic001G521100--Sobic002G246900 Sobic002G351100 Sobic002G351100 Sobic001G521100--Sobic002G351100 Sobic001G521100--Sobic002G315400 Sobic001G521100--Sobic001G025900 Sobic001G521100--Sobic006G119300 Sobic006G236800 Sobic006G236800 Sobic001G521100--Sobic006G236800 Sobic003G442300 Sobic003G442300 Sobic001G521100--Sobic003G442300 Sobic001G521100--Sobic003G297200 Sobic010G165800--Sobic009G081800 Sobic010G165900 Sobic010G165900 Sobic010G165800--Sobic010G165900 Sobic007G112100 Sobic007G112100 Sobic010G165800--Sobic007G112100 Sobic001G530100 Sobic001G530100 Sobic010G165800--Sobic001G530100 Sobic010G165800--Sobic006G095300 Sobic004G291200 Sobic004G291200 Sobic010G165800--Sobic004G291200 Sobic010G165800--Sobic001G506300 Sobic001G532800 Sobic001G532800 Sobic010G165800--Sobic001G532800 Sobic002G286632 Sobic002G286632 Sobic010G165800--Sobic002G286632 Sobic002G315400--Sobic001G521100 Sobic002G092200 Sobic002G092200 Sobic002G315400--Sobic002G092200 Sobic002G315400--Sobic002G351100 Sobic002G236700 Sobic002G236700 Sobic002G315400--Sobic002G236700 Sobic009G109300 Sobic009G109300 Sobic002G315400--Sobic009G109300 Sobic003G412800 Sobic003G412800 Sobic002G315400--Sobic003G412800 Sobic002G315400--Sobic003G297200 Sobic002G315400--Sobic002G246900 Sobic002G315400--Sobic007G112100 Sobic010G257500--Sobic010G009600 Sobic003G343200 Sobic003G343200 Sobic010G257500--Sobic003G343200 Sobic001G534400 Sobic001G534400 Sobic010G257500--Sobic001G534400 Sobic010G257500--Sobic006G127200 Sobic010G257500--Sobic010G013400 Sobic010G018900 Sobic010G018900 Sobic010G257500--Sobic010G018900 Sobic010G257500--Sobic002G271400 Sobic004G014100 Sobic004G014100 Sobic010G257500--Sobic004G014100 Sobic010G038900 Sobic010G038900 Sobic010G257500--Sobic010G038900 Sobic003G297200--Sobic002G351100 Sobic001G300400 Sobic001G300400 Sobic003G297200--Sobic001G300400 Sobic003G297200--Sobic006G236800 Sobic003G297200--Sobic001G521100 Sobic003G297200--Sobic002G246900 Sobic003G297200--Sobic002G315400 Sobic007G084200 Sobic007G084200 Sobic003G297200--Sobic007G084200 Sobic003G244000 Sobic003G244000 Sobic003G297200--Sobic003G244000 Sobic002G190000 Sobic002G190000 Sobic003G297200--Sobic002G190000
Octagon: transcription factors


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