Gene annotation
Transcriptome id Sobic.008G118300.2,Sobic.008G118300.1
Synonym Sb08g017200
Functional annotation expressed protein
UniProt C5YPE2 , A0A1Z5R721
Pfam -
Panther DB PTHR36759 PTHR36759:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21400 : -
RAP-DB (Rice) LOC_Os12g35550.2,LOC_Os12g35550.1 : expressed protein
MaizeGDB (Corn) Zm00025a054350
Brachypodium -
Barley HORVU5Hr1G025310.2 , HORVU5Hr1G025310.3 , HORVU5Hr1G025310.4
Wheat TraesCS5A02G094100 , TraesCS5A02G094100 , TraesCS5B02G100200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G286100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
2 Sobic.002G304400 expressed protein -
3 Sobic.004G353500 oxidoreductase, putative, expressed K00472: prolyl 4-hydroxylase
4 Sobic.008G017700 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
5 Sobic.004G160800 inositol hexaphosphate kinase, putative, expressed K00915: IPMK, inositol-polyphosphate multikinase
6 Sobic.010G002800 AGAP000326-PA, putative, expressed K18163: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6
7 Sobic.003G418400 expressed protein -
8 Sobic.002G037600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.006G271000 mis12 protein, expressed -
10 Sobic.010G250000 60S ribosomal protein L8, putative, expressed -
11 Sobic.006G095300 expressed protein -
12 Sobic.004G215200 expressed protein -
13 Sobic.003G194300 50S ribosomal protein, putative, expressed K02914: RP-L34, MRPL34, large subunit ribosomal protein L34
14 Sobic.001G135200 OB-fold nucleic acid binding domain containing protein, putative, expressed K15365: RecQ-mediated genome instability protein 2
15 Sobic.001G309200 fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
16 Sobic.006G208200 GHMP kinases ATP-binding protein, putative, expressed K18677: galacturonokinase
17 Sobic.002G153400 meiotic coiled-coil protein 7, putative, expressed -
18 Sobic.003G294900 expressed protein -
19 Sobic.009G244900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cycloartenol-C-24-methyltransferase 1, putative, expressed K00559: SMT1, sterol 24-C-methyltransferase
20 Sobic.004G069400 mTERF family protein, expressed K15032: mTERF domain-containing protein, mitochondrial


Gene co-expression network
sample Sobic008G118300 Sobic008G118300 Sobic001G286100 Sobic001G286100 Sobic008G118300--Sobic001G286100 Sobic002G304400 Sobic002G304400 Sobic008G118300--Sobic002G304400 Sobic004G353500 Sobic004G353500 Sobic008G118300--Sobic004G353500 Sobic008G017700 Sobic008G017700 Sobic008G118300--Sobic008G017700 Sobic004G160800 Sobic004G160800 Sobic008G118300--Sobic004G160800 Sobic010G002800 Sobic010G002800 Sobic008G118300--Sobic010G002800 Sobic003G418400 Sobic003G418400 Sobic008G118300--Sobic003G418400 Sobic002G037600 Sobic002G037600 Sobic008G118300--Sobic002G037600 Sobic006G271000 Sobic006G271000 Sobic008G118300--Sobic006G271000 Sobic004G069400 Sobic004G069400 Sobic001G286100--Sobic004G069400 Sobic001G286100--Sobic008G118300 Sobic001G286100--Sobic003G418400 Sobic007G201000 Sobic007G201000 Sobic001G286100--Sobic007G201000 Sobic010G250000 Sobic010G250000 Sobic001G286100--Sobic010G250000 Sobic001G135200 Sobic001G135200 Sobic001G286100--Sobic001G135200 Sobic001G286100--Sobic006G271000 Sobic009G063800 Sobic009G063800 Sobic001G286100--Sobic009G063800 Sobic001G309200 Sobic001G309200 Sobic001G286100--Sobic001G309200 Sobic001G413100 Sobic001G413100 Sobic002G304400--Sobic001G413100 Sobic002G304400--Sobic008G118300 Sobic002G304400--Sobic004G069400 Sobic007G112100 Sobic007G112100 Sobic002G304400--Sobic007G112100 Sobic002G304400--Sobic001G286100 Sobic001G167500 Sobic001G167500 Sobic002G304400--Sobic001G167500 Sobic001G336050 Sobic001G336050 Sobic002G304400--Sobic001G336050 Sobic001G521100 Sobic001G521100 Sobic002G304400--Sobic001G521100 Sobic001G081900 Sobic001G081900 Sobic002G304400--Sobic001G081900 Sobic003G294900 Sobic003G294900 Sobic004G353500--Sobic003G294900 Sobic004G353500--Sobic008G118300 Sobic005G044300 Sobic005G044300 Sobic004G353500--Sobic005G044300 Sobic007G012900 Sobic007G012900 Sobic004G353500--Sobic007G012900 Sobic004G353500--Sobic004G160800 Sobic004G353500--Sobic001G286100 Sobic004G353500--Sobic002G037600 Sobic001G203800 Sobic001G203800 Sobic004G353500--Sobic001G203800 Sobic002G186500 Sobic002G186500 Sobic004G353500--Sobic002G186500 Sobic008G017700--Sobic008G118300 Sobic008G017700--Sobic007G112100 Sobic009G244900 Sobic009G244900 Sobic008G017700--Sobic009G244900 Sobic007G192500 Sobic007G192500 Sobic008G017700--Sobic007G192500 Sobic009G103400 Sobic009G103400 Sobic008G017700--Sobic009G103400 Sobic008G017700--Sobic003G418400 Sobic005G210500 Sobic005G210500 Sobic008G017700--Sobic005G210500 Sobic008G141900 Sobic008G141900 Sobic008G017700--Sobic008G141900 Sobic008G046000 Sobic008G046000 Sobic008G017700--Sobic008G046000 Sobic004G160800--Sobic004G353500 Sobic004G160800--Sobic008G118300 Sobic001G181500 Sobic001G181500 Sobic004G160800--Sobic001G181500 Sobic009G204601 Sobic009G204601 Sobic004G160800--Sobic009G204601 Sobic004G160800--Sobic001G286100 Sobic001G206700 Sobic001G206700 Sobic004G160800--Sobic001G206700 Sobic004G160800--Sobic001G336050 Sobic009G117200 Sobic009G117200 Sobic004G160800--Sobic009G117200 Sobic003G289601 Sobic003G289601 Sobic004G160800--Sobic003G289601 Sobic001G352800 Sobic001G352800 Sobic010G002800--Sobic001G352800 Sobic003G085500 Sobic003G085500 Sobic010G002800--Sobic003G085500 Sobic003G388700 Sobic003G388700 Sobic010G002800--Sobic003G388700 Sobic002G232400 Sobic002G232400 Sobic010G002800--Sobic002G232400 Sobic010G002800--Sobic001G309200 Sobic004G186100 Sobic004G186100 Sobic010G002800--Sobic004G186100 Sobic002G222200 Sobic002G222200 Sobic010G002800--Sobic002G222200 Sobic001G073600 Sobic001G073600 Sobic010G002800--Sobic001G073600 Sobic004G007700 Sobic004G007700 Sobic010G002800--Sobic004G007700 Sobic003G418400--Sobic005G210500 Sobic001G117900 Sobic001G117900 Sobic003G418400--Sobic001G117900 Sobic009G214500 Sobic009G214500 Sobic003G418400--Sobic009G214500 Sobic004G215200 Sobic004G215200 Sobic003G418400--Sobic004G215200 Sobic006G208200 Sobic006G208200 Sobic003G418400--Sobic006G208200 Sobic001G433600 Sobic001G433600 Sobic003G418400--Sobic001G433600 Sobic002G309100 Sobic002G309100 Sobic003G418400--Sobic002G309100 Sobic010G009700 Sobic010G009700 Sobic003G418400--Sobic010G009700 Sobic001G327100 Sobic001G327100 Sobic003G418400--Sobic001G327100 Sobic001G196800 Sobic001G196800 Sobic002G037600--Sobic001G196800 Sobic002G037600--Sobic003G294900 Sobic002G037600--Sobic001G203800 Sobic002G037600--Sobic006G208200 Sobic004G328100 Sobic004G328100 Sobic002G037600--Sobic004G328100 Sobic006G272300 Sobic006G272300 Sobic002G037600--Sobic006G272300 Sobic002G037600--Sobic001G309200 Sobic005G185200 Sobic005G185200 Sobic002G037600--Sobic005G185200 Sobic003G270100 Sobic003G270100 Sobic002G037600--Sobic003G270100 Sobic006G271000--Sobic001G352800 Sobic002G153400 Sobic002G153400 Sobic006G271000--Sobic002G153400 Sobic009G220000 Sobic009G220000 Sobic006G271000--Sobic009G220000 Sobic006G271000--Sobic001G135200 Sobic001G192700 Sobic001G192700 Sobic006G271000--Sobic001G192700 Sobic006G271000--Sobic001G286100 Sobic006G271000--Sobic010G002800 Sobic001G348000 Sobic001G348000 Sobic006G271000--Sobic001G348000 Sobic006G271000--Sobic005G210500
Octagon: transcription factors


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