Gene annotation
Transcriptome id Sobic.004G168800.1
Synonym Sb04g022020
Functional annotation expressed protein
UniProt C5XU18
Pfam -
Panther DB PTHR22952 PTHR22952:SF111
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G04840 : bZIP protein
RAP-DB (Rice) LOC_Os02g33560.1 : expressed protein
MaizeGDB (Corn) Zm00025a031524 , Zm00025a020583
Brachypodium PNT68777 , PNT68778 , PNT68779 , KQJ99776
Barley HORVU6Hr1G051110.4 , HORVU6Hr1G051110.5 , HORVU6Hr1G051110.6 , HORVU6Hr1G051110.7 , HORVU6Hr1G051110.1 , HORVU6Hr1G051110.2 , HORVU6Hr1G051110.9
Wheat TraesCS6D02G187300 , TraesCS6B02G222800 , TraesCS6A02G203200 , TraesCS6D02G187300
Populus -


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cDNA sequences
Sobic.004G168800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G297200 lipase, putative, expressed -
2 Sobic.002G351100 DNA repair protein Rad51, putative, expressed K04482: DNA repair protein RAD51
3 Sobic.002G315400 expressed protein -
4 Sobic.004G205300 Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed K11251: histone H2A
5 Sobic.001G300400 expansin precursor, putative, expressed -
6 Sobic.002G286100 DUF292 domain containing protein, expressed -
7 Sobic.008G033300 sodium/calcium exchanger protein, putative, expressed K13754: SLC24A6, solute carrier family 24 (sodium/potassium/calcium exchanger), member 6
8 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2
9 Sobic.004G312700 expressed protein -
10 Sobic.001G399300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein phosphotase protein, putative, expressed -
11 Sobic.003G208800 aspartic proteinase, putative, expressed -
12 Sobic.008G088600 expressed protein -
13 Sobic.002G246900 expressed protein -
14 Sobic.003G107200 SNF7 domain containing protein, putative, expressed K12198: CHMP5, charged multivesicular body protein 5
15 Sobic.002G092200 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
16 Sobic.001G429000 harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.004G070900 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.002G236700 TMV-MP30 binding protein 2C, putative, expressed -
19 Sobic.007G073600 expressed protein K16585: HAUS augmin-like complex subunit 2
20 Sobic.007G008300 WD domain, G-beta repeat domain containing protein, expressed K10751: chromatin assembly factor 1 subunit B


Gene co-expression network
sample Sobic004G168800 Sobic004G168800 Sobic003G297200 Sobic003G297200 Sobic004G168800--Sobic003G297200 Sobic002G351100 Sobic002G351100 Sobic004G168800--Sobic002G351100 Sobic002G315400 Sobic002G315400 Sobic004G168800--Sobic002G315400 Sobic004G205300 Sobic004G205300 Sobic004G168800--Sobic004G205300 Sobic001G300400 Sobic001G300400 Sobic004G168800--Sobic001G300400 Sobic002G286100 Sobic002G286100 Sobic004G168800--Sobic002G286100 Sobic008G033300 Sobic008G033300 Sobic004G168800--Sobic008G033300 Sobic001G521100 Sobic001G521100 Sobic004G168800--Sobic001G521100 Sobic004G312700 Sobic004G312700 Sobic004G168800--Sobic004G312700 Sobic003G297200--Sobic002G351100 Sobic003G297200--Sobic001G300400 Sobic006G236800 Sobic006G236800 Sobic003G297200--Sobic006G236800 Sobic003G297200--Sobic001G521100 Sobic002G246900 Sobic002G246900 Sobic003G297200--Sobic002G246900 Sobic003G297200--Sobic002G315400 Sobic007G084200 Sobic007G084200 Sobic003G297200--Sobic007G084200 Sobic003G244000 Sobic003G244000 Sobic003G297200--Sobic003G244000 Sobic002G190000 Sobic002G190000 Sobic003G297200--Sobic002G190000 Sobic002G351100--Sobic001G300400 Sobic002G351100--Sobic003G297200 Sobic002G351100--Sobic001G521100 Sobic002G351100--Sobic003G244000 Sobic002G351100--Sobic002G315400 Sobic009G194900 Sobic009G194900 Sobic002G351100--Sobic009G194900 Sobic001G440900 Sobic001G440900 Sobic002G351100--Sobic001G440900 Sobic002G351100--Sobic002G246900 Sobic001G238900 Sobic001G238900 Sobic002G351100--Sobic001G238900 Sobic002G315400--Sobic001G521100 Sobic002G092200 Sobic002G092200 Sobic002G315400--Sobic002G092200 Sobic002G315400--Sobic002G351100 Sobic002G236700 Sobic002G236700 Sobic002G315400--Sobic002G236700 Sobic009G109300 Sobic009G109300 Sobic002G315400--Sobic009G109300 Sobic003G412800 Sobic003G412800 Sobic002G315400--Sobic003G412800 Sobic002G315400--Sobic003G297200 Sobic002G315400--Sobic002G246900 Sobic007G112100 Sobic007G112100 Sobic002G315400--Sobic007G112100 Sobic008G114500 Sobic008G114500 Sobic004G205300--Sobic008G114500 Sobic004G279601 Sobic004G279601 Sobic004G205300--Sobic004G279601 Sobic001G070200 Sobic001G070200 Sobic004G205300--Sobic001G070200 Sobic010G215300 Sobic010G215300 Sobic004G205300--Sobic010G215300 Sobic002G293800 Sobic002G293800 Sobic004G205300--Sobic002G293800 Sobic001G098900 Sobic001G098900 Sobic004G205300--Sobic001G098900 Sobic003G414400 Sobic003G414400 Sobic004G205300--Sobic003G414400 Sobic010G234800 Sobic010G234800 Sobic004G205300--Sobic010G234800 Sobic007G017700 Sobic007G017700 Sobic004G205300--Sobic007G017700 Sobic001G300400--Sobic002G351100 Sobic001G289900 Sobic001G289900 Sobic001G300400--Sobic001G289900 Sobic001G300400--Sobic006G236800 Sobic001G300400--Sobic003G297200 Sobic004G047100 Sobic004G047100 Sobic001G300400--Sobic004G047100 Sobic002G289800 Sobic002G289800 Sobic001G300400--Sobic002G289800 Sobic002G426800 Sobic002G426800 Sobic001G300400--Sobic002G426800 Sobic003G102000 Sobic003G102000 Sobic001G300400--Sobic003G102000 Sobic001G091500 Sobic001G091500 Sobic001G300400--Sobic001G091500 Sobic004G108400 Sobic004G108400 Sobic002G286100--Sobic004G108400 Sobic009G084100 Sobic009G084100 Sobic002G286100--Sobic009G084100 Sobic003G320300 Sobic003G320300 Sobic002G286100--Sobic003G320300 Sobic005G157300 Sobic005G157300 Sobic002G286100--Sobic005G157300 Sobic001G295400 Sobic001G295400 Sobic002G286100--Sobic001G295400 Sobic009G225500 Sobic009G225500 Sobic002G286100--Sobic009G225500 Sobic001G452900 Sobic001G452900 Sobic002G286100--Sobic001G452900 Sobic007G008300 Sobic007G008300 Sobic002G286100--Sobic007G008300 Sobic009G172950 Sobic009G172950 Sobic002G286100--Sobic009G172950 Sobic008G033400 Sobic008G033400 Sobic008G033300--Sobic008G033400 Sobic003G210100 Sobic003G210100 Sobic008G033300--Sobic003G210100 Sobic004G202000 Sobic004G202000 Sobic008G033300--Sobic004G202000 Sobic008G033300--Sobic004G168800 Sobic002G348100 Sobic002G348100 Sobic008G033300--Sobic002G348100 Sobic009G221600 Sobic009G221600 Sobic008G033300--Sobic009G221600 Sobic008G088600 Sobic008G088600 Sobic008G033300--Sobic008G088600 Sobic009G242300 Sobic009G242300 Sobic008G033300--Sobic009G242300 Sobic003G338966 Sobic003G338966 Sobic008G033300--Sobic003G338966 Sobic002G113400 Sobic002G113400 Sobic001G521100--Sobic002G113400 Sobic001G521100--Sobic002G246900 Sobic001G521100--Sobic002G351100 Sobic001G521100--Sobic002G315400 Sobic001G025900 Sobic001G025900 Sobic001G521100--Sobic001G025900 Sobic006G119300 Sobic006G119300 Sobic001G521100--Sobic006G119300 Sobic001G521100--Sobic006G236800 Sobic003G442300 Sobic003G442300 Sobic001G521100--Sobic003G442300 Sobic001G521100--Sobic003G297200 Sobic004G198200 Sobic004G198200 Sobic004G312700--Sobic004G198200 Sobic004G300600 Sobic004G300600 Sobic004G312700--Sobic004G300600 Sobic004G312700--Sobic004G168800 Sobic009G081400 Sobic009G081400 Sobic004G312700--Sobic009G081400 Sobic007G130000 Sobic007G130000 Sobic004G312700--Sobic007G130000 Sobic001G427400 Sobic001G427400 Sobic004G312700--Sobic001G427400 Sobic004G312700--Sobic001G070200 Sobic009G190400 Sobic009G190400 Sobic004G312700--Sobic009G190400 Sobic004G312700--Sobic003G414400
Octagon: transcription factors


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