Gene annotation
Transcriptome id Sobic.003G208800.1
Synonym Sb03g026970
Functional annotation aspartic proteinase, putative, expressed
UniProt C5XQ74
Pfam PF00026
Panther DB PTHR13683 PTHR13683:SF308
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT1G01300 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os01g41550.1 : aspartic proteinase, putative, expressed
MaizeGDB (Corn) Zm00025a028616
Brachypodium KQK08580
Barley HORVU3Hr1G052320.3 , HORVU3Hr1G052320.2 , HORVU3Hr1G052320.1 , HORVU3Hr1G052320.4
Wheat -
Populus -


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cDNA sequences
Sobic.003G208800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G263400 uracil-DNA glycosylase, putative, expressed K03648: UNG, uracil-DNA glycosylase
2 Sobic.001G123300 Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed K05350: beta-glucosidase
3 Sobic.001G081800 GASR3 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
4 Sobic.002G351100 DNA repair protein Rad51, putative, expressed K04482: DNA repair protein RAD51
5 Sobic.010G212700 tetraspanin family protein, putative, expressed -
6 Sobic.001G171100 expressed protein -
7 Sobic.001G081100 OsSub31 - Putative Subtilisin homologue, expressed -
8 Sobic.002G343000 expressed protein -
9 Sobic.002G109100 LTPL42 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.006G143300 nuclear transport factor 2, putative, expressed -
11 Sobic.003G217500 expressed protein -
12 Sobic.004G145300 OsFBD12 - F-box and FBD domain containing protein, expressed -
13 Sobic.002G335500 OsFBX255 - F-box domain containing protein, expressed -
14 Sobic.009G148000 anthranilate phosphoribosyltransferase, putative, expressed -
15 Sobic.001G154400 expp1 protein precursor, putative, expressed -
16 Sobic.002G253900 growth regulator related protein, putative, expressed -
17 Sobic.001G085200 X8 domain containing protein, expressed -
18 Sobic.003G324300 zinc finger C3HC4 type family protein, putative, expressed K10695: E3 ubiquitin-protein ligase RNF1/2
19 Sobic.002G238800 mago nashi, putative, expressed K12877: protein mago nashi
20 Sobic.006G200901 - -


Gene co-expression network
sample Sobic003G208800 Sobic003G208800 Sobic006G263400 Sobic006G263400 Sobic003G208800--Sobic006G263400 Sobic001G123300 Sobic001G123300 Sobic003G208800--Sobic001G123300 Sobic001G081800 Sobic001G081800 Sobic003G208800--Sobic001G081800 Sobic002G351100 Sobic002G351100 Sobic003G208800--Sobic002G351100 Sobic010G212700 Sobic010G212700 Sobic003G208800--Sobic010G212700 Sobic001G171100 Sobic001G171100 Sobic003G208800--Sobic001G171100 Sobic001G081100 Sobic001G081100 Sobic003G208800--Sobic001G081100 Sobic002G343000 Sobic002G343000 Sobic003G208800--Sobic002G343000 Sobic002G109100 Sobic002G109100 Sobic003G208800--Sobic002G109100 Sobic006G263400--Sobic003G208800 Sobic006G263400--Sobic002G109100 Sobic006G263400--Sobic001G123300 Sobic001G120400 Sobic001G120400 Sobic006G263400--Sobic001G120400 Sobic006G263400--Sobic002G343000 Sobic002G315400 Sobic002G315400 Sobic006G263400--Sobic002G315400 Sobic006G263400--Sobic002G351100 Sobic010G177100 Sobic010G177100 Sobic006G263400--Sobic010G177100 Sobic009G148000 Sobic009G148000 Sobic006G263400--Sobic009G148000 Sobic001G123300--Sobic003G208800 Sobic001G123100 Sobic001G123100 Sobic001G123300--Sobic001G123100 Sobic004G145300 Sobic004G145300 Sobic001G123300--Sobic004G145300 Sobic001G123300--Sobic001G081100 Sobic002G284100 Sobic002G284100 Sobic001G123300--Sobic002G284100 Sobic001G123300--Sobic001G171100 Sobic002G220700 Sobic002G220700 Sobic001G123300--Sobic002G220700 Sobic001G123300--Sobic010G212700 Sobic001G123300--Sobic006G263400 Sobic002G238800 Sobic002G238800 Sobic001G081800--Sobic002G238800 Sobic006G143300 Sobic006G143300 Sobic001G081800--Sobic006G143300 Sobic002G335500 Sobic002G335500 Sobic001G081800--Sobic002G335500 Sobic002G354800 Sobic002G354800 Sobic001G081800--Sobic002G354800 Sobic005G164800 Sobic005G164800 Sobic001G081800--Sobic005G164800 Sobic001G081800--Sobic002G343000 Sobic001G081800--Sobic001G171100 Sobic005G033700 Sobic005G033700 Sobic001G081800--Sobic005G033700 Sobic003G379900 Sobic003G379900 Sobic001G081800--Sobic003G379900 Sobic001G300400 Sobic001G300400 Sobic002G351100--Sobic001G300400 Sobic003G297200 Sobic003G297200 Sobic002G351100--Sobic003G297200 Sobic001G521100 Sobic001G521100 Sobic002G351100--Sobic001G521100 Sobic003G244000 Sobic003G244000 Sobic002G351100--Sobic003G244000 Sobic002G351100--Sobic002G315400 Sobic009G194900 Sobic009G194900 Sobic002G351100--Sobic009G194900 Sobic001G440900 Sobic001G440900 Sobic002G351100--Sobic001G440900 Sobic002G246900 Sobic002G246900 Sobic002G351100--Sobic002G246900 Sobic001G238900 Sobic001G238900 Sobic002G351100--Sobic001G238900 Sobic010G212700--Sobic001G171100 Sobic001G468000 Sobic001G468000 Sobic010G212700--Sobic001G468000 Sobic003G022900 Sobic003G022900 Sobic010G212700--Sobic003G022900 Sobic006G066400 Sobic006G066400 Sobic010G212700--Sobic006G066400 Sobic010G180200 Sobic010G180200 Sobic010G212700--Sobic010G180200 Sobic002G196500 Sobic002G196500 Sobic010G212700--Sobic002G196500 Sobic004G218000 Sobic004G218000 Sobic010G212700--Sobic004G218000 Sobic002G374200 Sobic002G374200 Sobic010G212700--Sobic002G374200 Sobic004G014100 Sobic004G014100 Sobic010G212700--Sobic004G014100 Sobic001G171100--Sobic010G212700 Sobic001G171100--Sobic003G022900 Sobic001G377600 Sobic001G377600 Sobic001G171100--Sobic001G377600 Sobic008G072900 Sobic008G072900 Sobic001G171100--Sobic008G072900 Sobic003G027200 Sobic003G027200 Sobic001G171100--Sobic003G027200 Sobic001G171100--Sobic005G164800 Sobic003G029900 Sobic003G029900 Sobic001G171100--Sobic003G029900 Sobic001G171200 Sobic001G171200 Sobic001G171100--Sobic001G171200 Sobic006G097300 Sobic006G097300 Sobic001G171100--Sobic006G097300 Sobic010G261000 Sobic010G261000 Sobic001G081100--Sobic010G261000 Sobic001G081100--Sobic001G123300 Sobic001G081100--Sobic003G208800 Sobic002G213500 Sobic002G213500 Sobic001G081100--Sobic002G213500 Sobic001G154400 Sobic001G154400 Sobic001G081100--Sobic001G154400 Sobic006G133700 Sobic006G133700 Sobic001G081100--Sobic006G133700 Sobic001G081100--Sobic004G145300 Sobic001G081100--Sobic006G263400 Sobic001G080200 Sobic001G080200 Sobic001G081100--Sobic001G080200 Sobic002G343000--Sobic009G148000 Sobic006G200901 Sobic006G200901 Sobic002G343000--Sobic006G200901 Sobic002G343000--Sobic004G014100 Sobic002G343000--Sobic006G143300 Sobic002G253900 Sobic002G253900 Sobic002G343000--Sobic002G253900 Sobic003G217500 Sobic003G217500 Sobic002G343000--Sobic003G217500 Sobic002G230400 Sobic002G230400 Sobic002G343000--Sobic002G230400 Sobic008G041900 Sobic008G041900 Sobic002G343000--Sobic008G041900 Sobic006G186300 Sobic006G186300 Sobic002G343000--Sobic006G186300 Sobic001G458400 Sobic001G458400 Sobic002G109100--Sobic001G458400 Sobic001G085200 Sobic001G085200 Sobic002G109100--Sobic001G085200 Sobic002G109100--Sobic006G263400 Sobic002G109100--Sobic006G143300 Sobic002G109100--Sobic001G123300 Sobic002G109100--Sobic003G208800 Sobic002G109100--Sobic002G343000 Sobic007G083000 Sobic007G083000 Sobic002G109100--Sobic007G083000 Sobic003G430100 Sobic003G430100 Sobic002G109100--Sobic003G430100
Octagon: transcription factors


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