Gene annotation
Transcriptome id Sobic.002G109100.1
Synonym DIR1, Sb02g009300
Functional annotation LTPL42 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5X3N5
Pfam PF14368
Panther DB PTHR33122 PTHR33122:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G48485 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os07g18750.1 : LTPL42 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a013297
Brachypodium -
Barley HORVU4Hr1G082600.1
Wheat -
Populus -


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cDNA sequences
Sobic.002G109100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G458400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Os3bglu6 - beta-glucosidase/beta-fucosidase/beta-galactosidase, expressed K01188: beta-glucosidase
2 Sobic.001G085200 X8 domain containing protein, expressed -
3 Sobic.006G263400 uracil-DNA glycosylase, putative, expressed K03648: UNG, uracil-DNA glycosylase
4 Sobic.006G143300 nuclear transport factor 2, putative, expressed -
5 Sobic.001G123300 Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed K05350: beta-glucosidase
6 Sobic.003G208800 aspartic proteinase, putative, expressed -
7 Sobic.002G343000 expressed protein -
8 Sobic.007G083000 transcriptional repressor, putative, expressed -
9 Sobic.003G430100 Phosphoesterase family protein(PubMedID : 24906815)@phosphoesterase family protein, putative, expressed K01114: phospholipase C
10 Sobic.009G148000 anthranilate phosphoribosyltransferase, putative, expressed -
11 Sobic.001G249200 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
12 Sobic.006G200901 - -
13 Sobic.003G217500 expressed protein -
14 Sobic.001G269650 - -
15 Sobic.003G232332 - -
16 Sobic.005G186400 patatin, putative, expressed -
17 Sobic.005G074400 OsPDIL1-1 protein disulfide isomerase PDIL1-1, expressed K09580: PDIA1, protein disulfide-isomerase A1
18 Sobic.007G066200 - -
19 Sobic.005G226800 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
20 Sobic.010G029800 - -


Gene co-expression network
sample Sobic002G109100 Sobic002G109100 Sobic001G458400 Sobic001G458400 Sobic002G109100--Sobic001G458400 Sobic001G085200 Sobic001G085200 Sobic002G109100--Sobic001G085200 Sobic006G263400 Sobic006G263400 Sobic002G109100--Sobic006G263400 Sobic006G143300 Sobic006G143300 Sobic002G109100--Sobic006G143300 Sobic001G123300 Sobic001G123300 Sobic002G109100--Sobic001G123300 Sobic003G208800 Sobic003G208800 Sobic002G109100--Sobic003G208800 Sobic002G343000 Sobic002G343000 Sobic002G109100--Sobic002G343000 Sobic007G083000 Sobic007G083000 Sobic002G109100--Sobic007G083000 Sobic003G430100 Sobic003G430100 Sobic002G109100--Sobic003G430100 Sobic001G458400--Sobic002G109100 Sobic001G458400--Sobic007G083000 Sobic004G010000 Sobic004G010000 Sobic001G458400--Sobic004G010000 Sobic001G458400--Sobic006G143300 Sobic001G458400--Sobic001G123300 Sobic009G060501 Sobic009G060501 Sobic001G458400--Sobic009G060501 Sobic006G200901 Sobic006G200901 Sobic001G458400--Sobic006G200901 Sobic005G186400 Sobic005G186400 Sobic001G458400--Sobic005G186400 Sobic003G217500 Sobic003G217500 Sobic001G458400--Sobic003G217500 Sobic008G051500 Sobic008G051500 Sobic001G085200--Sobic008G051500 Sobic010G029800 Sobic010G029800 Sobic001G085200--Sobic010G029800 Sobic003G232332 Sobic003G232332 Sobic001G085200--Sobic003G232332 Sobic005G052200 Sobic005G052200 Sobic001G085200--Sobic005G052200 Sobic001G541400 Sobic001G541400 Sobic001G085200--Sobic001G541400 Sobic001G269650 Sobic001G269650 Sobic001G085200--Sobic001G269650 Sobic007G066200 Sobic007G066200 Sobic001G085200--Sobic007G066200 Sobic004G008700 Sobic004G008700 Sobic001G085200--Sobic004G008700 Sobic005G042400 Sobic005G042400 Sobic001G085200--Sobic005G042400 Sobic006G263400--Sobic003G208800 Sobic006G263400--Sobic002G109100 Sobic006G263400--Sobic001G123300 Sobic001G120400 Sobic001G120400 Sobic006G263400--Sobic001G120400 Sobic006G263400--Sobic002G343000 Sobic002G315400 Sobic002G315400 Sobic006G263400--Sobic002G315400 Sobic002G351100 Sobic002G351100 Sobic006G263400--Sobic002G351100 Sobic010G177100 Sobic010G177100 Sobic006G263400--Sobic010G177100 Sobic009G148000 Sobic009G148000 Sobic006G263400--Sobic009G148000 Sobic005G033700 Sobic005G033700 Sobic006G143300--Sobic005G033700 Sobic006G143300--Sobic006G200901 Sobic006G143300--Sobic002G343000 Sobic004G014100 Sobic004G014100 Sobic006G143300--Sobic004G014100 Sobic001G081800 Sobic001G081800 Sobic006G143300--Sobic001G081800 Sobic002G349000 Sobic002G349000 Sobic006G143300--Sobic002G349000 Sobic002G230400 Sobic002G230400 Sobic006G143300--Sobic002G230400 Sobic005G164800 Sobic005G164800 Sobic006G143300--Sobic005G164800 Sobic006G186300 Sobic006G186300 Sobic006G143300--Sobic006G186300 Sobic001G123300--Sobic003G208800 Sobic001G123100 Sobic001G123100 Sobic001G123300--Sobic001G123100 Sobic004G145300 Sobic004G145300 Sobic001G123300--Sobic004G145300 Sobic001G081100 Sobic001G081100 Sobic001G123300--Sobic001G081100 Sobic002G284100 Sobic002G284100 Sobic001G123300--Sobic002G284100 Sobic001G171100 Sobic001G171100 Sobic001G123300--Sobic001G171100 Sobic002G220700 Sobic002G220700 Sobic001G123300--Sobic002G220700 Sobic010G212700 Sobic010G212700 Sobic001G123300--Sobic010G212700 Sobic001G123300--Sobic006G263400 Sobic003G208800--Sobic006G263400 Sobic003G208800--Sobic001G123300 Sobic003G208800--Sobic001G081800 Sobic003G208800--Sobic002G351100 Sobic003G208800--Sobic010G212700 Sobic003G208800--Sobic001G171100 Sobic003G208800--Sobic001G081100 Sobic003G208800--Sobic002G343000 Sobic003G208800--Sobic002G109100 Sobic002G343000--Sobic009G148000 Sobic002G343000--Sobic006G200901 Sobic002G343000--Sobic004G014100 Sobic002G343000--Sobic006G143300 Sobic002G253900 Sobic002G253900 Sobic002G343000--Sobic002G253900 Sobic002G343000--Sobic003G217500 Sobic002G343000--Sobic002G230400 Sobic008G041900 Sobic008G041900 Sobic002G343000--Sobic008G041900 Sobic002G343000--Sobic006G186300 Sobic007G083000--Sobic001G458400 Sobic010G230300 Sobic010G230300 Sobic007G083000--Sobic010G230300 Sobic007G083000--Sobic002G109100 Sobic007G083000--Sobic009G060501 Sobic008G122500 Sobic008G122500 Sobic007G083000--Sobic008G122500 Sobic001G542100 Sobic001G542100 Sobic007G083000--Sobic001G542100 Sobic001G249200 Sobic001G249200 Sobic007G083000--Sobic001G249200 Sobic003G149600 Sobic003G149600 Sobic007G083000--Sobic003G149600 Sobic002G086500 Sobic002G086500 Sobic007G083000--Sobic002G086500 Sobic004G210000 Sobic004G210000 Sobic003G430100--Sobic004G210000 Sobic004G196800 Sobic004G196800 Sobic003G430100--Sobic004G196800 Sobic010G047300 Sobic010G047300 Sobic003G430100--Sobic010G047300 Sobic009G033500 Sobic009G033500 Sobic003G430100--Sobic009G033500 Sobic002G293100 Sobic002G293100 Sobic003G430100--Sobic002G293100 Sobic003G430100--Sobic006G186300 Sobic010G084800 Sobic010G084800 Sobic003G430100--Sobic010G084800 Sobic002G247300 Sobic002G247300 Sobic003G430100--Sobic002G247300 Sobic009G025100 Sobic009G025100 Sobic003G430100--Sobic009G025100
Octagon: transcription factors


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