Gene annotation
Transcriptome id Sobic.005G186400.1
Synonym Sb05g024430, AtPLAIVC, PLAV, PLP4
Functional annotation patatin, putative, expressed
UniProt Q9XE79 , C5Y6D9
Pfam PF01734
Panther DB PTHR32176 PTHR32176:SF10
NCBI CDD KOG0513; Ca2+-independent phospholipase A2
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT2G26560 : phospholipase A 2A
RAP-DB (Rice) LOC_Os11g39990.1 : patatin, putative, expressed
MaizeGDB (Corn) Zm00025a015878 , Zm00025a029371 , Zm00025a005447 , Zm00025a015884
Brachypodium KQJ98659 , KQJ98604 , KQJ87809 , KQK11881
Barley HORVU1Hr1G012140.11 , HORVU1Hr1G012140.10 , HORVU1Hr1G012140.12 , HORVU1Hr1G069200.1 , HORVU1Hr1G069200.2 , HORVU1Hr1G069200.3 , HORVU1Hr1G012140.7 , HORVU7Hr1G036460.6 , HORVU7Hr1G036460.7 , HORVU7Hr1G036460.4 , HORVU7Hr1G036460.5 , HORVU7Hr1G036460.2 , HORVU7Hr1G036460.3 , HORVU7Hr1G036460.1 , HORVU7Hr1G036460.8 , HORVU7Hr1G036460.9 , HORVU4Hr1G075070.9 , HORVU4Hr1G075070.8 , HORVU4Hr1G075070.3 , HORVU4Hr1G075070.2 , HORVU4Hr1G075070.7 , HORVU4Hr1G075070.6 , HORVU4Hr1G075070.5 , HORVU4Hr1G075070.4 , HORVU1Hr1G012140.9 , HORVU1Hr1G012140.8 , HORVU1Hr1G012140.5 , HORVU1Hr1G012140.4 , HORVU1Hr1G012140.6 , HORVU1Hr1G012140.1 , HORVU1Hr1G012140.3 , HORVU1Hr1G012140.2 , HORVU3Hr1G004220.4 , HORVU3Hr1G004220.6 , HORVU3Hr1G004220.1 , HORVU3Hr1G004220.3 , HORVU3Hr1G004220.2
Wheat TraesCS1B02G077500 , TraesCS7B02G082400 , TraesCS1D02G302900 , TraesCS1A02G059100 , TraesCS7D02G178600 , TraesCS4B02G286600 , TraesCS7A02G177300 , TraesCS1D02G060500 , TraesCS1A02G303400 , TraesCS3D02G033500 , TraesCS1B02G313800 , TraesCS3D02G033200 , TraesCS2B02G185200 , TraesCS2B02G185200 , TraesCS2D02G166800 , TraesCS2D02G166800 , TraesCS4A02G017400
Populus -


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cDNA sequences
Sobic.005G186400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G238900 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.007G191200 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
3 Sobic.008G069000 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
4 Sobic.004G010000 OsSCP6 - Putative Serine Carboxypeptidase homologue, expressed K09645: vitellogenic carboxypeptidase-like protein
5 Sobic.004G167900 pectinesterase inhibitor domain containing protein, putative, expressed -
6 Sobic.002G019400 OsMADS69 - MADS-box family gene with M-alpha type-box, expressed -
7 Sobic.006G143300 nuclear transport factor 2, putative, expressed -
8 Sobic.010G029800 - -
9 Sobic.008G181200 - -
10 Sobic.007G036400 expressed protein -
11 Sobic.005G177200 expressed protein -
12 Sobic.005G037800 sialyltransferase family domain containing protein, expressed -
13 Sobic.004G048300 - -
14 Sobic.004G008700 - -
15 Sobic.006G139400 expressed protein -
16 Sobic.005G042400 expressed protein -
17 Sobic.007G040900 expressed protein -
18 Sobic.006G250200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@amino acid transporter, putative, expressed -
19 Sobic.010G137600 - -
20 Sobic.008G184400 aspartic proteinase, putative, expressed -


Gene co-expression network
sample Sobic005G186400 Sobic005G186400 Sobic002G238900 Sobic002G238900 Sobic005G186400--Sobic002G238900 Sobic007G191200 Sobic007G191200 Sobic005G186400--Sobic007G191200 Sobic008G069000 Sobic008G069000 Sobic005G186400--Sobic008G069000 Sobic004G010000 Sobic004G010000 Sobic005G186400--Sobic004G010000 Sobic004G167900 Sobic004G167900 Sobic005G186400--Sobic004G167900 Sobic002G019400 Sobic002G019400 Sobic005G186400--Sobic002G019400 Sobic006G143300 Sobic006G143300 Sobic005G186400--Sobic006G143300 Sobic010G029800 Sobic010G029800 Sobic005G186400--Sobic010G029800 Sobic008G181200 Sobic008G181200 Sobic005G186400--Sobic008G181200 Sobic002G238900--Sobic008G069000 Sobic005G177200 Sobic005G177200 Sobic002G238900--Sobic005G177200 Sobic006G139400 Sobic006G139400 Sobic002G238900--Sobic006G139400 Sobic005G037800 Sobic005G037800 Sobic002G238900--Sobic005G037800 Sobic002G238900--Sobic010G029800 Sobic003G238900 Sobic003G238900 Sobic002G238900--Sobic003G238900 Sobic002G238900--Sobic008G181200 Sobic004G048300 Sobic004G048300 Sobic002G238900--Sobic004G048300 Sobic001G307400 Sobic001G307400 Sobic002G238900--Sobic001G307400 Sobic005G042400 Sobic005G042400 Sobic007G191200--Sobic005G042400 Sobic007G191200--Sobic010G029800 Sobic005G124400 Sobic005G124400 Sobic007G191200--Sobic005G124400 Sobic004G008700 Sobic004G008700 Sobic007G191200--Sobic004G008700 Sobic010G137600 Sobic010G137600 Sobic007G191200--Sobic010G137600 Sobic005G052200 Sobic005G052200 Sobic007G191200--Sobic005G052200 Sobic007G191200--Sobic008G069000 Sobic004G114700 Sobic004G114700 Sobic007G191200--Sobic004G114700 Sobic003G103100 Sobic003G103100 Sobic007G191200--Sobic003G103100 Sobic008G069000--Sobic010G029800 Sobic008G069000--Sobic004G048300 Sobic008G069000--Sobic006G139400 Sobic008G069000--Sobic003G238900 Sobic008G069000--Sobic004G008700 Sobic008G069000--Sobic002G238900 Sobic008G069000--Sobic005G177200 Sobic007G040900 Sobic007G040900 Sobic008G069000--Sobic007G040900 Sobic008G069000--Sobic008G181200 Sobic004G010000--Sobic005G186400 Sobic001G458400 Sobic001G458400 Sobic004G010000--Sobic001G458400 Sobic004G010000--Sobic007G191200 Sobic002G115900 Sobic002G115900 Sobic004G010000--Sobic002G115900 Sobic004G010000--Sobic008G069000 Sobic004G010000--Sobic010G029800 Sobic004G010000--Sobic006G143300 Sobic004G010000--Sobic002G238900 Sobic004G010000--Sobic008G181200 Sobic010G233500 Sobic010G233500 Sobic004G167900--Sobic010G233500 Sobic008G045700 Sobic008G045700 Sobic004G167900--Sobic008G045700 Sobic004G167900--Sobic002G238900 Sobic008G184400 Sobic008G184400 Sobic004G167900--Sobic008G184400 Sobic009G210700 Sobic009G210700 Sobic004G167900--Sobic009G210700 Sobic004G167900--Sobic006G139400 Sobic010G221500 Sobic010G221500 Sobic004G167900--Sobic010G221500 Sobic007G109000 Sobic007G109000 Sobic004G167900--Sobic007G109000 Sobic001G323500 Sobic001G323500 Sobic004G167900--Sobic001G323500 Sobic002G019400--Sobic007G191200 Sobic002G019400--Sobic005G186400 Sobic001G067000 Sobic001G067000 Sobic002G019400--Sobic001G067000 Sobic002G019400--Sobic005G042400 Sobic002G101500 Sobic002G101500 Sobic002G019400--Sobic002G101500 Sobic005G175150 Sobic005G175150 Sobic002G019400--Sobic005G175150 Sobic002G019400--Sobic003G103100 Sobic009G062300 Sobic009G062300 Sobic002G019400--Sobic009G062300 Sobic002G019400--Sobic010G029800 Sobic005G033700 Sobic005G033700 Sobic006G143300--Sobic005G033700 Sobic006G200901 Sobic006G200901 Sobic006G143300--Sobic006G200901 Sobic002G343000 Sobic002G343000 Sobic006G143300--Sobic002G343000 Sobic004G014100 Sobic004G014100 Sobic006G143300--Sobic004G014100 Sobic001G081800 Sobic001G081800 Sobic006G143300--Sobic001G081800 Sobic002G349000 Sobic002G349000 Sobic006G143300--Sobic002G349000 Sobic002G230400 Sobic002G230400 Sobic006G143300--Sobic002G230400 Sobic005G164800 Sobic005G164800 Sobic006G143300--Sobic005G164800 Sobic006G186300 Sobic006G186300 Sobic006G143300--Sobic006G186300 Sobic010G029800--Sobic004G008700 Sobic010G029800--Sobic005G042400 Sobic010G029800--Sobic008G069000 Sobic003G099800 Sobic003G099800 Sobic010G029800--Sobic003G099800 Sobic010G029800--Sobic005G052200 Sobic010G029800--Sobic010G137600 Sobic010G029800--Sobic008G181200 Sobic010G029800--Sobic007G040900 Sobic010G029800--Sobic004G114700 Sobic008G181200--Sobic005G177200 Sobic008G181200--Sobic005G037800 Sobic002G049800 Sobic002G049800 Sobic008G181200--Sobic002G049800 Sobic008G181200--Sobic008G184400 Sobic008G181200--Sobic008G069000 Sobic008G181200--Sobic006G139400 Sobic008G181200--Sobic010G029800 Sobic010G137700 Sobic010G137700 Sobic008G181200--Sobic010G137700 Sobic008G181200--Sobic001G323500
Octagon: transcription factors


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