Gene annotation
Transcriptome id Sobic.006G250200.2,Sobic.006G250200.1
Synonym Sb06g031530, AAP7
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
amino acid transporter, putative, expressed
UniProt C5Y9L0 , A0A1Z5RFE3
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF320
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23810 : amino acid permease 7
RAP-DB (Rice) LOC_Os04g56470.1 : amino acid transporter, putative, expressed
MaizeGDB (Corn) Zm00025a025708 , Zm00025a011043 , Zm00025a034135 , Zm00025a009452 , Zm00025a026558 , Zm00025a054084 , Zm00025a054082 , Zm00025a051049 , Zm00025a012741 , Zm00025a021860 , Zm00025a037366
Brachypodium KQJ85086 , PNT69503 , KQJ85085 , PNT61270 , PNT61269 , PNT61268 , KQK01542 , KQK10875 , KQJ89071 , KQJ83307 , KQK18009
Barley HORVU5Hr1G037660.5 , HORVU5Hr1G037660.4 , HORVU5Hr1G037660.6 , HORVU5Hr1G037660.1 , HORVU5Hr1G037660.3 , HORVU5Hr1G037660.2 , HORVU7Hr1G088560.6 , HORVU7Hr1G088560.7 , HORVU7Hr1G088560.4 , HORVU7Hr1G088560.5 , HORVU7Hr1G088560.2 , HORVU7Hr1G088560.3 , HORVU7Hr1G088560.1 , HORVU2Hr1G111140.10 , HORVU2Hr1G084780.9 , HORVU2Hr1G084780.8 , HORVU2Hr1G084780.7 , HORVU2Hr1G084780.6 , HORVU2Hr1G084780.5 , HORVU2Hr1G084780.4 , HORVU2Hr1G084780.3 , HORVU2Hr1G084780.2 , HORVU2Hr1G084780.1 , HORVU2Hr1G111140.8 , HORVU2Hr1G111140.9 , HORVU2Hr1G111140.1 , HORVU2Hr1G111140.2 , HORVU2Hr1G111140.3 , HORVU2Hr1G111140.4 , HORVU2Hr1G111140.5 , HORVU2Hr1G111140.6 , HORVU2Hr1G111140.7 , HORVU4Hr1G043680.1 , HORVU4Hr1G043680.3 , HORVU4Hr1G043680.2 , HORVU4Hr1G043680.5 , HORVU4Hr1G043680.4 , HORVU2Hr1G081790.8 , HORVU2Hr1G081790.3 , HORVU2Hr1G081790.2 , HORVU2Hr1G081790.1 , HORVU2Hr1G081790.6 , HORVU2Hr1G081790.5 , HORVU2Hr1G081790.4
Wheat TraesCS2D02G500000 , TraesCS2D02G331800 , TraesCS2D02G331800 , TraesCS4B02G100800 , TraesCS3B02G420700 , TraesCS2B02G351100 , TraesCS1A02G264500 , TraesCS4D02G097400 , TraesCS2A02G331100 , TraesCS2A02G331100 , TraesCS7A02G188200 , TraesCS2A02G499800 , TraesCS7A02G356600 , TraesCS3D02G381500 , TraesCS2B02G527800 , TraesCS1D02G264700 , TraesCS7B02G271200 , TraesCS4A02G215300 , TraesCS2B02G351100 , TraesCS1B02G275200 , TraesCS2B02G367000 , TraesCS2D02G347000 , TraesCS3A02G388000 , TraesCS7D02G189000 , TraesCS7D02G366200 , TraesCS7B02G093200 , TraesCS2A02G348600
Populus -


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cDNA sequences
Sobic.006G250200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G049800 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
2 Sobic.008G181200 - -
3 Sobic.005G037800 sialyltransferase family domain containing protein, expressed -
4 Sobic.010G137700 - -
5 Sobic.005G226800 pumilio-family RNA binding protein, putative, expressed K17943: pumilio RNA-binding family
6 Sobic.005G177200 expressed protein -
7 Sobic.002G238900 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.009G062300 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
9 Sobic.008G184400 aspartic proteinase, putative, expressed -
10 Sobic.007G066200 - -
11 Sobic.003G211600 - -
12 Sobic.005G042400 expressed protein -
13 Sobic.010G029800 - -
14 Sobic.009G006800 eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed -
15 Sobic.005G124400 - -
16 Sobic.001G307400 oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed K19329: WW domain-containing oxidoreductase
17 Sobic.008G069000 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
18 Sobic.005G173900 - -
19 Sobic.001G323500 expressed protein -
20 Sobic.005G141500 - -


Gene co-expression network
sample Sobic006G250200 Sobic006G250200 Sobic002G049800 Sobic002G049800 Sobic006G250200--Sobic002G049800 Sobic008G181200 Sobic008G181200 Sobic006G250200--Sobic008G181200 Sobic005G037800 Sobic005G037800 Sobic006G250200--Sobic005G037800 Sobic010G137700 Sobic010G137700 Sobic006G250200--Sobic010G137700 Sobic005G226800 Sobic005G226800 Sobic006G250200--Sobic005G226800 Sobic005G177200 Sobic005G177200 Sobic006G250200--Sobic005G177200 Sobic002G238900 Sobic002G238900 Sobic006G250200--Sobic002G238900 Sobic009G062300 Sobic009G062300 Sobic006G250200--Sobic009G062300 Sobic008G184400 Sobic008G184400 Sobic006G250200--Sobic008G184400 Sobic002G049800--Sobic005G037800 Sobic002G049800--Sobic008G184400 Sobic002G049800--Sobic008G181200 Sobic002G049800--Sobic010G137700 Sobic002G049800--Sobic005G177200 Sobic002G049800--Sobic005G226800 Sobic001G323500 Sobic001G323500 Sobic002G049800--Sobic001G323500 Sobic009G006800 Sobic009G006800 Sobic002G049800--Sobic009G006800 Sobic003G135201 Sobic003G135201 Sobic002G049800--Sobic003G135201 Sobic008G181200--Sobic005G177200 Sobic008G181200--Sobic005G037800 Sobic008G181200--Sobic002G049800 Sobic008G181200--Sobic008G184400 Sobic008G069000 Sobic008G069000 Sobic008G181200--Sobic008G069000 Sobic006G139400 Sobic006G139400 Sobic008G181200--Sobic006G139400 Sobic010G029800 Sobic010G029800 Sobic008G181200--Sobic010G029800 Sobic008G181200--Sobic010G137700 Sobic008G181200--Sobic001G323500 Sobic005G037800--Sobic005G177200 Sobic005G037800--Sobic008G181200 Sobic005G037800--Sobic002G049800 Sobic005G037800--Sobic008G184400 Sobic005G037800--Sobic006G139400 Sobic005G037800--Sobic008G069000 Sobic005G037800--Sobic010G137700 Sobic005G037800--Sobic001G323500 Sobic005G037800--Sobic010G029800 Sobic010G137700--Sobic009G006800 Sobic010G137700--Sobic002G049800 Sobic005G141500 Sobic005G141500 Sobic010G137700--Sobic005G141500 Sobic010G137700--Sobic003G135201 Sobic003G415800 Sobic003G415800 Sobic010G137700--Sobic003G415800 Sobic005G174600 Sobic005G174600 Sobic010G137700--Sobic005G174600 Sobic005G221200 Sobic005G221200 Sobic010G137700--Sobic005G221200 Sobic005G109900 Sobic005G109900 Sobic010G137700--Sobic005G109900 Sobic001G270600 Sobic001G270600 Sobic010G137700--Sobic001G270600 Sobic005G226800--Sobic009G062300 Sobic007G066200 Sobic007G066200 Sobic005G226800--Sobic007G066200 Sobic003G211600 Sobic003G211600 Sobic005G226800--Sobic003G211600 Sobic005G124400 Sobic005G124400 Sobic005G226800--Sobic005G124400 Sobic001G269650 Sobic001G269650 Sobic005G226800--Sobic001G269650 Sobic001G374600 Sobic001G374600 Sobic005G226800--Sobic001G374600 Sobic005G042400 Sobic005G042400 Sobic005G226800--Sobic005G042400 Sobic001G495700 Sobic001G495700 Sobic005G226800--Sobic001G495700 Sobic005G174200 Sobic005G174200 Sobic005G226800--Sobic005G174200 Sobic005G177200--Sobic008G181200 Sobic005G177200--Sobic005G037800 Sobic005G177200--Sobic006G139400 Sobic005G177200--Sobic002G049800 Sobic005G177200--Sobic008G184400 Sobic005G177200--Sobic001G323500 Sobic005G177200--Sobic008G069000 Sobic009G210700 Sobic009G210700 Sobic005G177200--Sobic009G210700 Sobic003G238900 Sobic003G238900 Sobic005G177200--Sobic003G238900 Sobic002G238900--Sobic008G069000 Sobic002G238900--Sobic005G177200 Sobic002G238900--Sobic006G139400 Sobic002G238900--Sobic005G037800 Sobic002G238900--Sobic010G029800 Sobic002G238900--Sobic003G238900 Sobic002G238900--Sobic008G181200 Sobic004G048300 Sobic004G048300 Sobic002G238900--Sobic004G048300 Sobic001G307400 Sobic001G307400 Sobic002G238900--Sobic001G307400 Sobic009G062300--Sobic005G226800 Sobic009G062300--Sobic003G211600 Sobic009G062300--Sobic005G124400 Sobic009G062300--Sobic007G066200 Sobic009G062300--Sobic001G269650 Sobic009G062300--Sobic005G042400 Sobic003G103100 Sobic003G103100 Sobic009G062300--Sobic003G103100 Sobic009G062300--Sobic001G495700 Sobic010G133150 Sobic010G133150 Sobic009G062300--Sobic010G133150 Sobic008G184400--Sobic005G037800 Sobic008G184400--Sobic002G049800 Sobic008G184400--Sobic005G177200 Sobic008G184400--Sobic008G181200 Sobic008G184400--Sobic010G137700 Sobic008G184400--Sobic001G323500 Sobic008G184400--Sobic006G139400 Sobic008G184400--Sobic008G069000 Sobic008G184400--Sobic002G238900
Octagon: transcription factors


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