Gene annotation
Transcriptome id Sobic.001G458400.1,Sobic.001G458400.2
Synonym BGLU40, Sb01g043030
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
Os3bglu6 - beta-glucosidase/beta-fucosidase/beta-galactosidase, expressed
UniProt A0A1B6QR79 , A0A1B6QPP7
Pfam PF00232
Panther DB PTHR10353 PTHR10353:SF76
NCBI CDD -
KEGG Orthology K01188; beta-glucosidase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G26560 : beta glucosidase 40
RAP-DB (Rice) LOC_Os03g11420.1 : Os3bglu6 - beta-glucosidase/beta-fucosidase/beta-galactosidase, expressed
MaizeGDB (Corn) Zm00025a001278 , Zm00025a053089
Brachypodium KQJ92780 , KQJ92781 , KQJ86845
Barley HORVU7Hr1G091730.1 , HORVU7Hr1G091730.3 , HORVU7Hr1G091730.2 , HORVU7Hr1G091730.5 , HORVU7Hr1G091730.4 , HORVU7Hr1G091730.6
Wheat TraesCS4A02G056400 , TraesCS2D02G333700 , TraesCS7B02G289100 , TraesCS4D02G248000 , TraesCS7A02G359700 , TraesCS4D02G248000 , TraesCS7B02G267800 , TraesCS4D02G085500 , TraesCS7D02G382800 , TraesCS7D02G382800 , TraesCS7B02G267800 , TraesCS7D02G363100 , TraesCS2B02G353200 , TraesCS4D02G085600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G109100 LTPL42 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.007G083000 transcriptional repressor, putative, expressed -
3 Sobic.004G010000 OsSCP6 - Putative Serine Carboxypeptidase homologue, expressed K09645: vitellogenic carboxypeptidase-like protein
4 Sobic.006G143300 nuclear transport factor 2, putative, expressed -
5 Sobic.001G123300 Os3bglu7 - beta-glucosidase, exo-beta-glucanse, expressed K05350: beta-glucosidase
6 Sobic.009G060501 - -
7 Sobic.006G200901 - -
8 Sobic.005G186400 patatin, putative, expressed -
9 Sobic.003G217500 expressed protein -
10 Sobic.010G230300 galactosyltransferase, putative, expressed -
11 Sobic.002G253900 growth regulator related protein, putative, expressed -
12 Sobic.006G263400 uracil-DNA glycosylase, putative, expressed K03648: UNG, uracil-DNA glycosylase
13 Sobic.007G129000 nucleobase-ascorbate transporter, putative, expressed -
14 Sobic.002G343000 expressed protein -
15 Sobic.003G208800 aspartic proteinase, putative, expressed -
16 Sobic.001G171100 expressed protein -
17 Sobic.003G224700 glycosyltransferase family protein 1, putative, expressed -
18 Sobic.003G430100 Phosphoesterase family protein(PubMedID : 24906815)@phosphoesterase family protein, putative, expressed K01114: phospholipase C
19 Sobic.001G123100 Os3bglu8 - beta-glucosidase, exo-beta-glucansase, high similarity to Os3bglu7, expressed K05350: beta-glucosidase
20 Sobic.009G148000 anthranilate phosphoribosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic001G458400 Sobic001G458400 Sobic002G109100 Sobic002G109100 Sobic001G458400--Sobic002G109100 Sobic007G083000 Sobic007G083000 Sobic001G458400--Sobic007G083000 Sobic004G010000 Sobic004G010000 Sobic001G458400--Sobic004G010000 Sobic006G143300 Sobic006G143300 Sobic001G458400--Sobic006G143300 Sobic001G123300 Sobic001G123300 Sobic001G458400--Sobic001G123300 Sobic009G060501 Sobic009G060501 Sobic001G458400--Sobic009G060501 Sobic006G200901 Sobic006G200901 Sobic001G458400--Sobic006G200901 Sobic005G186400 Sobic005G186400 Sobic001G458400--Sobic005G186400 Sobic003G217500 Sobic003G217500 Sobic001G458400--Sobic003G217500 Sobic002G109100--Sobic001G458400 Sobic001G085200 Sobic001G085200 Sobic002G109100--Sobic001G085200 Sobic006G263400 Sobic006G263400 Sobic002G109100--Sobic006G263400 Sobic002G109100--Sobic006G143300 Sobic002G109100--Sobic001G123300 Sobic003G208800 Sobic003G208800 Sobic002G109100--Sobic003G208800 Sobic002G343000 Sobic002G343000 Sobic002G109100--Sobic002G343000 Sobic002G109100--Sobic007G083000 Sobic003G430100 Sobic003G430100 Sobic002G109100--Sobic003G430100 Sobic007G083000--Sobic001G458400 Sobic010G230300 Sobic010G230300 Sobic007G083000--Sobic010G230300 Sobic007G083000--Sobic002G109100 Sobic007G083000--Sobic009G060501 Sobic008G122500 Sobic008G122500 Sobic007G083000--Sobic008G122500 Sobic001G542100 Sobic001G542100 Sobic007G083000--Sobic001G542100 Sobic001G249200 Sobic001G249200 Sobic007G083000--Sobic001G249200 Sobic003G149600 Sobic003G149600 Sobic007G083000--Sobic003G149600 Sobic002G086500 Sobic002G086500 Sobic007G083000--Sobic002G086500 Sobic004G010000--Sobic005G186400 Sobic004G010000--Sobic001G458400 Sobic007G191200 Sobic007G191200 Sobic004G010000--Sobic007G191200 Sobic002G115900 Sobic002G115900 Sobic004G010000--Sobic002G115900 Sobic008G069000 Sobic008G069000 Sobic004G010000--Sobic008G069000 Sobic010G029800 Sobic010G029800 Sobic004G010000--Sobic010G029800 Sobic004G010000--Sobic006G143300 Sobic002G238900 Sobic002G238900 Sobic004G010000--Sobic002G238900 Sobic008G181200 Sobic008G181200 Sobic004G010000--Sobic008G181200 Sobic005G033700 Sobic005G033700 Sobic006G143300--Sobic005G033700 Sobic006G143300--Sobic006G200901 Sobic006G143300--Sobic002G343000 Sobic004G014100 Sobic004G014100 Sobic006G143300--Sobic004G014100 Sobic001G081800 Sobic001G081800 Sobic006G143300--Sobic001G081800 Sobic002G349000 Sobic002G349000 Sobic006G143300--Sobic002G349000 Sobic002G230400 Sobic002G230400 Sobic006G143300--Sobic002G230400 Sobic005G164800 Sobic005G164800 Sobic006G143300--Sobic005G164800 Sobic006G186300 Sobic006G186300 Sobic006G143300--Sobic006G186300 Sobic001G123300--Sobic003G208800 Sobic001G123100 Sobic001G123100 Sobic001G123300--Sobic001G123100 Sobic004G145300 Sobic004G145300 Sobic001G123300--Sobic004G145300 Sobic001G081100 Sobic001G081100 Sobic001G123300--Sobic001G081100 Sobic002G284100 Sobic002G284100 Sobic001G123300--Sobic002G284100 Sobic001G171100 Sobic001G171100 Sobic001G123300--Sobic001G171100 Sobic002G220700 Sobic002G220700 Sobic001G123300--Sobic002G220700 Sobic010G212700 Sobic010G212700 Sobic001G123300--Sobic010G212700 Sobic001G123300--Sobic006G263400 Sobic006G276401 Sobic006G276401 Sobic009G060501--Sobic006G276401 Sobic003G135201 Sobic003G135201 Sobic009G060501--Sobic003G135201 Sobic001G323500 Sobic001G323500 Sobic009G060501--Sobic001G323500 Sobic005G141500 Sobic005G141500 Sobic009G060501--Sobic005G141500 Sobic005G221200 Sobic005G221200 Sobic009G060501--Sobic005G221200 Sobic005G148700 Sobic005G148700 Sobic009G060501--Sobic005G148700 Sobic005G147700 Sobic005G147700 Sobic009G060501--Sobic005G147700 Sobic005G109900 Sobic005G109900 Sobic009G060501--Sobic005G109900 Sobic009G039700 Sobic009G039700 Sobic009G060501--Sobic009G039700 Sobic006G200901--Sobic002G343000 Sobic006G200901--Sobic006G143300 Sobic006G200901--Sobic004G014100 Sobic009G148000 Sobic009G148000 Sobic006G200901--Sobic009G148000 Sobic002G253900 Sobic002G253900 Sobic006G200901--Sobic002G253900 Sobic006G200901--Sobic003G217500 Sobic006G200901--Sobic006G186300 Sobic006G200901--Sobic002G230400 Sobic004G075700 Sobic004G075700 Sobic006G200901--Sobic004G075700 Sobic005G186400--Sobic002G238900 Sobic005G186400--Sobic007G191200 Sobic005G186400--Sobic008G069000 Sobic005G186400--Sobic004G010000 Sobic004G167900 Sobic004G167900 Sobic005G186400--Sobic004G167900 Sobic002G019400 Sobic002G019400 Sobic005G186400--Sobic002G019400 Sobic005G186400--Sobic006G143300 Sobic005G186400--Sobic010G029800 Sobic005G186400--Sobic008G181200 Sobic004G250600 Sobic004G250600 Sobic003G217500--Sobic004G250600 Sobic003G217500--Sobic006G200901 Sobic003G217500--Sobic004G014100 Sobic003G217500--Sobic002G343000 Sobic003G217500--Sobic009G148000 Sobic006G140300 Sobic006G140300 Sobic003G217500--Sobic006G140300 Sobic004G196800 Sobic004G196800 Sobic003G217500--Sobic004G196800 Sobic003G304500 Sobic003G304500 Sobic003G217500--Sobic003G304500 Sobic003G217500--Sobic006G186300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.