Gene annotation
Transcriptome id Sobic.007G129000.1
Synonym Sb07g020510
Functional annotation nucleobase-ascorbate transporter, putative, expressed
UniProt A0A1B6PHJ5
Pfam PF00860
Panther DB PTHR11119 PTHR11119:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G62890 : Xanthine/uracil permease family protein
RAP-DB (Rice) LOC_Os08g32500.1 : nucleobase-ascorbate transporter, putative, expressed
MaizeGDB (Corn) Zm00025a046835 , Zm00025a006101
Brachypodium KQJ90106 , KQJ90105 , KQJ98293
Barley HORVU5Hr1G059600.7 , HORVU5Hr1G059600.6 , HORVU5Hr1G059600.5 , HORVU5Hr1G059600.4 , HORVU5Hr1G059600.3 , HORVU5Hr1G059600.2 , HORVU5Hr1G059600.1 , HORVU5Hr1G059600.9 , HORVU5Hr1G059600.8 , HORVU5Hr1G059600.14 , HORVU5Hr1G059600.13 , HORVU5Hr1G059600.12 , HORVU5Hr1G059600.11 , HORVU5Hr1G059600.10
Wheat TraesCS5B02G499100 , TraesCS5D02G499100 , TraesCS5D02G205600 , TraesCS5A02G485500 , TraesCS5B02G198300 , TraesCS5A02G200000
Populus -


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cDNA sequences
Sobic.007G129000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G144700 BRCA1 C Terminus domain containing protein, expressed K10683: BRCA1-associated RING domain protein 1
2 Sobic.010G265900 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
3 Sobic.009G208900 expressed protein -
4 Sobic.004G036800 glucan endo-1,3-beta-glucosidase precursor, putative, expressed -
5 Sobic.001G080200 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.004G286700 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.002G158900 AMP-binding domain containing protein, expressed -
8 Sobic.003G256900 aspartyl protease family protein, putative, expressed -
9 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
10 Sobic.006G236700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
11 Sobic.001G458400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Os3bglu6 - beta-glucosidase/beta-fucosidase/beta-galactosidase, expressed K01188: beta-glucosidase
12 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
13 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -
14 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
15 Sobic.010G032700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase domain containing protein, expressed K11434: type I protein arginine methyltransferase
16 Sobic.001G144200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
17 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
18 Sobic.002G357800 SHR, putative, expressed -
19 Sobic.005G025900 "domain confirmed by Pfam database, expression supported by NCBI EST database,expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
20 Sobic.006G172200 glycosyl transferase 8 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G129000 Sobic007G129000 Sobic006G144700 Sobic006G144700 Sobic007G129000--Sobic006G144700 Sobic010G265900 Sobic010G265900 Sobic007G129000--Sobic010G265900 Sobic009G208900 Sobic009G208900 Sobic007G129000--Sobic009G208900 Sobic004G036800 Sobic004G036800 Sobic007G129000--Sobic004G036800 Sobic001G080200 Sobic001G080200 Sobic007G129000--Sobic001G080200 Sobic004G286700 Sobic004G286700 Sobic007G129000--Sobic004G286700 Sobic002G158900 Sobic002G158900 Sobic007G129000--Sobic002G158900 Sobic003G256900 Sobic003G256900 Sobic007G129000--Sobic003G256900 Sobic001G468500 Sobic001G468500 Sobic007G129000--Sobic001G468500 Sobic002G191000 Sobic002G191000 Sobic006G144700--Sobic002G191000 Sobic006G144700--Sobic007G129000 Sobic009G087000 Sobic009G087000 Sobic006G144700--Sobic009G087000 Sobic010G067900 Sobic010G067900 Sobic006G144700--Sobic010G067900 Sobic006G172200 Sobic006G172200 Sobic006G144700--Sobic006G172200 Sobic001G146900 Sobic001G146900 Sobic006G144700--Sobic001G146900 Sobic010G103700 Sobic010G103700 Sobic006G144700--Sobic010G103700 Sobic004G271500 Sobic004G271500 Sobic006G144700--Sobic004G271500 Sobic004G321400 Sobic004G321400 Sobic006G144700--Sobic004G321400 Sobic006G200000 Sobic006G200000 Sobic010G265900--Sobic006G200000 Sobic005G120500 Sobic005G120500 Sobic010G265900--Sobic005G120500 Sobic006G102900 Sobic006G102900 Sobic010G265900--Sobic006G102900 Sobic005G080900 Sobic005G080900 Sobic010G265900--Sobic005G080900 Sobic003G084300 Sobic003G084300 Sobic010G265900--Sobic003G084300 Sobic009G189200 Sobic009G189200 Sobic010G265900--Sobic009G189200 Sobic006G120700 Sobic006G120700 Sobic010G265900--Sobic006G120700 Sobic001G157800 Sobic001G157800 Sobic010G265900--Sobic001G157800 Sobic004G344500 Sobic004G344500 Sobic010G265900--Sobic004G344500 Sobic004G233700 Sobic004G233700 Sobic009G208900--Sobic004G233700 Sobic005G144600 Sobic005G144600 Sobic009G208900--Sobic005G144600 Sobic002G142200 Sobic002G142200 Sobic009G208900--Sobic002G142200 Sobic003G179500 Sobic003G179500 Sobic009G208900--Sobic003G179500 Sobic010G274000 Sobic010G274000 Sobic009G208900--Sobic010G274000 Sobic003G410600 Sobic003G410600 Sobic009G208900--Sobic003G410600 Sobic007G168900 Sobic007G168900 Sobic009G208900--Sobic007G168900 Sobic004G047100 Sobic004G047100 Sobic009G208900--Sobic004G047100 Sobic001G177900 Sobic001G177900 Sobic009G208900--Sobic001G177900 Sobic004G343600 Sobic004G343600 Sobic004G036800--Sobic004G343600 Sobic004G036800--Sobic001G468500 Sobic006G133700 Sobic006G133700 Sobic004G036800--Sobic006G133700 Sobic001G412500 Sobic001G412500 Sobic004G036800--Sobic001G412500 Sobic004G036800--Sobic007G129000 Sobic010G256200 Sobic010G256200 Sobic004G036800--Sobic010G256200 Sobic001G369800 Sobic001G369800 Sobic004G036800--Sobic001G369800 Sobic001G040300 Sobic001G040300 Sobic004G036800--Sobic001G040300 Sobic004G036800--Sobic010G265900 Sobic003G283600 Sobic003G283600 Sobic001G080200--Sobic003G283600 Sobic001G123100 Sobic001G123100 Sobic001G080200--Sobic001G123100 Sobic001G080200--Sobic006G133700 Sobic001G452900 Sobic001G452900 Sobic001G080200--Sobic001G452900 Sobic001G083500 Sobic001G083500 Sobic001G080200--Sobic001G083500 Sobic002G337600 Sobic002G337600 Sobic001G080200--Sobic002G337600 Sobic010G241100 Sobic010G241100 Sobic001G080200--Sobic010G241100 Sobic010G086000 Sobic010G086000 Sobic001G080200--Sobic010G086000 Sobic002G284100 Sobic002G284100 Sobic001G080200--Sobic002G284100 Sobic003G420100 Sobic003G420100 Sobic004G286700--Sobic003G420100 Sobic004G286700--Sobic001G468500 Sobic004G286700--Sobic003G410600 Sobic007G113300 Sobic007G113300 Sobic004G286700--Sobic007G113300 Sobic007G094400 Sobic007G094400 Sobic004G286700--Sobic007G094400 Sobic003G017500 Sobic003G017500 Sobic004G286700--Sobic003G017500 Sobic004G286700--Sobic004G233700 Sobic009G242501 Sobic009G242501 Sobic004G286700--Sobic009G242501 Sobic009G021700 Sobic009G021700 Sobic004G286700--Sobic009G021700 Sobic008G099100 Sobic008G099100 Sobic002G158900--Sobic008G099100 Sobic001G514300 Sobic001G514300 Sobic002G158900--Sobic001G514300 Sobic005G231300 Sobic005G231300 Sobic002G158900--Sobic005G231300 Sobic003G083600 Sobic003G083600 Sobic002G158900--Sobic003G083600 Sobic002G158900--Sobic004G271500 Sobic003G082800 Sobic003G082800 Sobic002G158900--Sobic003G082800 Sobic009G079900 Sobic009G079900 Sobic002G158900--Sobic009G079900 Sobic005G025900 Sobic005G025900 Sobic002G158900--Sobic005G025900 Sobic001G144200 Sobic001G144200 Sobic002G158900--Sobic001G144200 Sobic004G232600 Sobic004G232600 Sobic003G256900--Sobic004G232600 Sobic003G205600 Sobic003G205600 Sobic003G256900--Sobic003G205600 Sobic005G035000 Sobic005G035000 Sobic003G256900--Sobic005G035000 Sobic003G256900--Sobic007G129000 Sobic004G176800 Sobic004G176800 Sobic003G256900--Sobic004G176800 Sobic003G419400 Sobic003G419400 Sobic003G256900--Sobic003G419400 Sobic004G099600 Sobic004G099600 Sobic003G256900--Sobic004G099600 Sobic001G403200 Sobic001G403200 Sobic003G256900--Sobic001G403200 Sobic010G097200 Sobic010G097200 Sobic003G256900--Sobic010G097200 Sobic001G468500--Sobic003G283600 Sobic003G003700 Sobic003G003700 Sobic001G468500--Sobic003G003700 Sobic001G468500--Sobic004G286700 Sobic010G277300 Sobic010G277300 Sobic001G468500--Sobic010G277300 Sobic001G468500--Sobic006G133700 Sobic001G030400 Sobic001G030400 Sobic001G468500--Sobic001G030400 Sobic002G238500 Sobic002G238500 Sobic001G468500--Sobic002G238500 Sobic001G468500--Sobic004G036800 Sobic004G331200 Sobic004G331200 Sobic001G468500--Sobic004G331200
Octagon: transcription factors


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