Gene annotation
Transcriptome id Sobic.003G256900.3,Sobic.003G256900.2
Synonym Sb03g031170
Functional annotation aspartyl protease family protein, putative, expressed
UniProt A0A1W0VYX1 , A0A1W0VYX9
Pfam PF00026 PF14541 PF14543 PF14541
Panther DB PTHR13683 PTHR13683:SF280
NCBI CDD KOG1339; Aspartyl protease
KEGG Orthology -
Gene Ontology GO:0006508; proteolysis GO:0004190aspartic-type endopeptidase activity


Orthologs (automatic annotation)
TAIR AT3G12700 : Eukaryotic aspartyl protease family protein
RAP-DB (Rice) LOC_Os05g48330.1,LOC_Os01g48750.1 : aspartyl protease family protein, putative, expressed,aspartic proteinase nepenthesin-2 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a036565 , Zm00025a044517 , Zm00025a044516 , Zm00025a028053 , Zm00025a038831 , Zm00025a044799
Brachypodium KQK09188 , KQK04960
Barley HORVU3Hr1G062570.11 , HORVU3Hr1G062570.10 , HORVU3Hr1G062570.12 , HORVU1Hr1G085500.6 , HORVU1Hr1G085500.5 , HORVU3Hr1G062570.3 , HORVU3Hr1G062570.9 , HORVU3Hr1G062570.8 , HORVU1Hr1G085500.4 , HORVU1Hr1G085500.1 , HORVU1Hr1G085500.3 , HORVU1Hr1G085500.2 , HORVU1Hr1G085500.8 , HORVU3Hr1G062570.5 , HORVU3Hr1G062570.7 , HORVU3Hr1G062570.6 , HORVU3Hr1G062570.1 , HORVU3Hr1G062570.4 , HORVU3Hr1G062570.2
Wheat TraesCS3A02G268100 , TraesCS3D02G268200 , TraesCS3D02G268200 , TraesCS1B02G414800 , TraesCS3B02G302500 , TraesCS1D02G395200 , TraesCS3A02G268100 , TraesCS1A02G387400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G232600 expressed protein -
2 Sobic.003G205600 uncharacterized protein At4g06744 precursor, putative, expressed -
3 Sobic.005G035000 DNA binding protein, putative, expressed -
4 Sobic.007G129000 nucleobase-ascorbate transporter, putative, expressed -
5 Sobic.004G176800 chaperone protein dnaJ 10, putative, expressed -
6 Sobic.003G419400 xylanase inhibitor, putative, expressed -
7 Sobic.004G099600 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA7 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
8 Sobic.001G403200 receptor-like kinase RHG1, putative, expressed -
9 Sobic.010G097200 expressed protein -
10 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
11 Sobic.009G208700 POEI45 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
12 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
13 Sobic.001G232000 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
14 Sobic.003G183300 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.002G343100 protein kinase, putative, expressed -
16 Sobic.006G133300 expressed protein -
17 Sobic.004G106100 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
19 Sobic.004G105100 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase


Gene co-expression network
sample Sobic003G256900 Sobic003G256900 Sobic004G232600 Sobic004G232600 Sobic003G256900--Sobic004G232600 Sobic003G205600 Sobic003G205600 Sobic003G256900--Sobic003G205600 Sobic005G035000 Sobic005G035000 Sobic003G256900--Sobic005G035000 Sobic007G129000 Sobic007G129000 Sobic003G256900--Sobic007G129000 Sobic004G176800 Sobic004G176800 Sobic003G256900--Sobic004G176800 Sobic003G419400 Sobic003G419400 Sobic003G256900--Sobic003G419400 Sobic004G099600 Sobic004G099600 Sobic003G256900--Sobic004G099600 Sobic001G403200 Sobic001G403200 Sobic003G256900--Sobic001G403200 Sobic010G097200 Sobic010G097200 Sobic003G256900--Sobic010G097200 Sobic009G153500 Sobic009G153500 Sobic004G232600--Sobic009G153500 Sobic004G232600--Sobic003G256900 Sobic005G170100 Sobic005G170100 Sobic004G232600--Sobic005G170100 Sobic010G027300 Sobic010G027300 Sobic004G232600--Sobic010G027300 Sobic003G086500 Sobic003G086500 Sobic004G232600--Sobic003G086500 Sobic004G232600--Sobic003G205600 Sobic008G062900 Sobic008G062900 Sobic004G232600--Sobic008G062900 Sobic003G083600 Sobic003G083600 Sobic004G232600--Sobic003G083600 Sobic001G348800 Sobic001G348800 Sobic004G232600--Sobic001G348800 Sobic003G000100 Sobic003G000100 Sobic003G205600--Sobic003G000100 Sobic003G240400 Sobic003G240400 Sobic003G205600--Sobic003G240400 Sobic004G322100 Sobic004G322100 Sobic003G205600--Sobic004G322100 Sobic003G205600--Sobic010G027300 Sobic008G016000 Sobic008G016000 Sobic003G205600--Sobic008G016000 Sobic001G229000 Sobic001G229000 Sobic003G205600--Sobic001G229000 Sobic006G028500 Sobic006G028500 Sobic003G205600--Sobic006G028500 Sobic004G110700 Sobic004G110700 Sobic003G205600--Sobic004G110700 Sobic004G271800 Sobic004G271800 Sobic003G205600--Sobic004G271800 Sobic001G373500 Sobic001G373500 Sobic005G035000--Sobic001G373500 Sobic001G189500 Sobic001G189500 Sobic005G035000--Sobic001G189500 Sobic005G035000--Sobic004G099600 Sobic003G226100 Sobic003G226100 Sobic005G035000--Sobic003G226100 Sobic001G349900 Sobic001G349900 Sobic005G035000--Sobic001G349900 Sobic010G194500 Sobic010G194500 Sobic005G035000--Sobic010G194500 Sobic001G302300 Sobic001G302300 Sobic005G035000--Sobic001G302300 Sobic005G035000--Sobic003G256900 Sobic005G035000--Sobic004G176800 Sobic006G144700 Sobic006G144700 Sobic007G129000--Sobic006G144700 Sobic010G265900 Sobic010G265900 Sobic007G129000--Sobic010G265900 Sobic009G208900 Sobic009G208900 Sobic007G129000--Sobic009G208900 Sobic004G036800 Sobic004G036800 Sobic007G129000--Sobic004G036800 Sobic001G080200 Sobic001G080200 Sobic007G129000--Sobic001G080200 Sobic004G286700 Sobic004G286700 Sobic007G129000--Sobic004G286700 Sobic002G158900 Sobic002G158900 Sobic007G129000--Sobic002G158900 Sobic007G129000--Sobic003G256900 Sobic001G468500 Sobic001G468500 Sobic007G129000--Sobic001G468500 Sobic003G151900 Sobic003G151900 Sobic004G176800--Sobic003G151900 Sobic006G201000 Sobic006G201000 Sobic004G176800--Sobic006G201000 Sobic003G324600 Sobic003G324600 Sobic004G176800--Sobic003G324600 Sobic008G099100 Sobic008G099100 Sobic004G176800--Sobic008G099100 Sobic006G134001 Sobic006G134001 Sobic004G176800--Sobic006G134001 Sobic004G176800--Sobic005G035000 Sobic004G176800--Sobic003G256900 Sobic004G249700 Sobic004G249700 Sobic004G176800--Sobic004G249700 Sobic004G176800--Sobic004G099600 Sobic003G419300 Sobic003G419300 Sobic003G419400--Sobic003G419300 Sobic001G232000 Sobic001G232000 Sobic003G419400--Sobic001G232000 Sobic002G239700 Sobic002G239700 Sobic003G419400--Sobic002G239700 Sobic002G076700 Sobic002G076700 Sobic003G419400--Sobic002G076700 Sobic002G091000 Sobic002G091000 Sobic003G419400--Sobic002G091000 Sobic009G208700 Sobic009G208700 Sobic003G419400--Sobic009G208700 Sobic004G214300 Sobic004G214300 Sobic003G419400--Sobic004G214300 Sobic008G077900 Sobic008G077900 Sobic003G419400--Sobic008G077900 Sobic005G071700 Sobic005G071700 Sobic003G419400--Sobic005G071700 Sobic004G099600--Sobic005G035000 Sobic004G099600--Sobic001G373500 Sobic010G067900 Sobic010G067900 Sobic004G099600--Sobic010G067900 Sobic002G275500 Sobic002G275500 Sobic004G099600--Sobic002G275500 Sobic001G144200 Sobic001G144200 Sobic004G099600--Sobic001G144200 Sobic010G155800 Sobic010G155800 Sobic004G099600--Sobic010G155800 Sobic006G130400 Sobic006G130400 Sobic004G099600--Sobic006G130400 Sobic004G099600--Sobic004G176800 Sobic004G099600--Sobic001G189500 Sobic002G020500 Sobic002G020500 Sobic001G403200--Sobic002G020500 Sobic004G271500 Sobic004G271500 Sobic001G403200--Sobic004G271500 Sobic003G041700 Sobic003G041700 Sobic001G403200--Sobic003G041700 Sobic010G104400 Sobic010G104400 Sobic001G403200--Sobic010G104400 Sobic008G113800 Sobic008G113800 Sobic001G403200--Sobic008G113800 Sobic001G403200--Sobic003G151900 Sobic001G314000 Sobic001G314000 Sobic001G403200--Sobic001G314000 Sobic001G038400 Sobic001G038400 Sobic001G403200--Sobic001G038400 Sobic006G009500 Sobic006G009500 Sobic001G403200--Sobic006G009500 Sobic003G167300 Sobic003G167300 Sobic010G097200--Sobic003G167300 Sobic006G205700 Sobic006G205700 Sobic010G097200--Sobic006G205700 Sobic008G037900 Sobic008G037900 Sobic010G097200--Sobic008G037900 Sobic007G037600 Sobic007G037600 Sobic010G097200--Sobic007G037600 Sobic005G033000 Sobic005G033000 Sobic010G097200--Sobic005G033000 Sobic009G065700 Sobic009G065700 Sobic010G097200--Sobic009G065700 Sobic003G441800 Sobic003G441800 Sobic010G097200--Sobic003G441800 Sobic004G119800 Sobic004G119800 Sobic010G097200--Sobic004G119800 Sobic004G014600 Sobic004G014600 Sobic010G097200--Sobic004G014600
Octagon: transcription factors


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