Gene annotation
Transcriptome id Sobic.004G232600.1
Synonym Sb04g027620
Functional annotation expressed protein
UniProt C5XYN7
Pfam -
Panther DB PTHR33448 PTHR33448:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G78110 : -
RAP-DB (Rice) LOC_Os02g51720.1 : expressed protein
MaizeGDB (Corn) Zm00025a022134 , Zm00025a033166
Brachypodium KQK01858
Barley HORVU6Hr1G074650.1
Wheat -
Populus -


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cDNA sequences
Sobic.004G232600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G153500 ankyrin repeat family protein, putative, expressed -
2 Sobic.003G256900 aspartyl protease family protein, putative, expressed -
3 Sobic.005G170100 phosphoesterase family protein, putative, expressed K01114: phospholipase C
4 Sobic.010G027300 DNA binding protein, putative, expressed -
5 Sobic.003G086500 expressed protein -
6 Sobic.003G205600 uncharacterized protein At4g06744 precursor, putative, expressed -
7 Sobic.008G062900 H-BTB8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
8 Sobic.003G083600 DNA binding protein, putative, expressed -
9 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
10 Sobic.003G229800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@X8 domain containing protein, expressed -
11 Sobic.005G035000 DNA binding protein, putative, expressed -
12 Sobic.002G096900 autophagy-related protein 3, putative, expressed -
13 Sobic.008G135300 thaumatin family domain containing protein, expressed -
14 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
15 Sobic.010G230300 galactosyltransferase, putative, expressed -
16 Sobic.004G294300 expansin precursor, putative, expressed -
17 Sobic.007G087400 amino acid transporter, putative, expressed -
18 Sobic.007G090472 - -
19 Sobic.001G055400 WRKY6, expressed -
20 Sobic.006G187200 rhoGAP domain containing protein, expressed -


Gene co-expression network
sample Sobic004G232600 Sobic004G232600 Sobic009G153500 Sobic009G153500 Sobic004G232600--Sobic009G153500 Sobic003G256900 Sobic003G256900 Sobic004G232600--Sobic003G256900 Sobic005G170100 Sobic005G170100 Sobic004G232600--Sobic005G170100 Sobic010G027300 Sobic010G027300 Sobic004G232600--Sobic010G027300 Sobic003G086500 Sobic003G086500 Sobic004G232600--Sobic003G086500 Sobic003G205600 Sobic003G205600 Sobic004G232600--Sobic003G205600 Sobic008G062900 Sobic008G062900 Sobic004G232600--Sobic008G062900 Sobic003G083600 Sobic003G083600 Sobic004G232600--Sobic003G083600 Sobic001G348800 Sobic001G348800 Sobic004G232600--Sobic001G348800 Sobic002G155700 Sobic002G155700 Sobic009G153500--Sobic002G155700 Sobic004G021400 Sobic004G021400 Sobic009G153500--Sobic004G021400 Sobic007G087400 Sobic007G087400 Sobic009G153500--Sobic007G087400 Sobic009G153500--Sobic004G232600 Sobic009G153500--Sobic003G205600 Sobic004G160500 Sobic004G160500 Sobic009G153500--Sobic004G160500 Sobic002G096900 Sobic002G096900 Sobic009G153500--Sobic002G096900 Sobic009G153500--Sobic001G348800 Sobic010G230300 Sobic010G230300 Sobic009G153500--Sobic010G230300 Sobic003G256900--Sobic004G232600 Sobic003G256900--Sobic003G205600 Sobic005G035000 Sobic005G035000 Sobic003G256900--Sobic005G035000 Sobic007G129000 Sobic007G129000 Sobic003G256900--Sobic007G129000 Sobic004G176800 Sobic004G176800 Sobic003G256900--Sobic004G176800 Sobic003G419400 Sobic003G419400 Sobic003G256900--Sobic003G419400 Sobic004G099600 Sobic004G099600 Sobic003G256900--Sobic004G099600 Sobic001G403200 Sobic001G403200 Sobic003G256900--Sobic001G403200 Sobic010G097200 Sobic010G097200 Sobic003G256900--Sobic010G097200 Sobic006G225500 Sobic006G225500 Sobic005G170100--Sobic006G225500 Sobic001G300500 Sobic001G300500 Sobic005G170100--Sobic001G300500 Sobic002G183700 Sobic002G183700 Sobic005G170100--Sobic002G183700 Sobic005G127400 Sobic005G127400 Sobic005G170100--Sobic005G127400 Sobic005G170100--Sobic010G027300 Sobic004G110700 Sobic004G110700 Sobic005G170100--Sobic004G110700 Sobic003G140700 Sobic003G140700 Sobic005G170100--Sobic003G140700 Sobic001G502000 Sobic001G502000 Sobic005G170100--Sobic001G502000 Sobic007G158800 Sobic007G158800 Sobic005G170100--Sobic007G158800 Sobic010G027300--Sobic003G205600 Sobic001G264000 Sobic001G264000 Sobic010G027300--Sobic001G264000 Sobic004G348800 Sobic004G348800 Sobic010G027300--Sobic004G348800 Sobic003G093700 Sobic003G093700 Sobic010G027300--Sobic003G093700 Sobic003G269600 Sobic003G269600 Sobic010G027300--Sobic003G269600 Sobic010G212500 Sobic010G212500 Sobic010G027300--Sobic010G212500 Sobic002G404100 Sobic002G404100 Sobic010G027300--Sobic002G404100 Sobic001G430100 Sobic001G430100 Sobic010G027300--Sobic001G430100 Sobic004G249000 Sobic004G249000 Sobic010G027300--Sobic004G249000 Sobic003G086500--Sobic004G232600 Sobic005G036300 Sobic005G036300 Sobic003G086500--Sobic005G036300 Sobic006G160000 Sobic006G160000 Sobic003G086500--Sobic006G160000 Sobic006G187200 Sobic006G187200 Sobic003G086500--Sobic006G187200 Sobic001G203700 Sobic001G203700 Sobic003G086500--Sobic001G203700 Sobic003G086500--Sobic002G096900 Sobic003G229800 Sobic003G229800 Sobic003G086500--Sobic003G229800 Sobic005G226000 Sobic005G226000 Sobic003G086500--Sobic005G226000 Sobic001G467500 Sobic001G467500 Sobic003G086500--Sobic001G467500 Sobic003G000100 Sobic003G000100 Sobic003G205600--Sobic003G000100 Sobic003G240400 Sobic003G240400 Sobic003G205600--Sobic003G240400 Sobic004G322100 Sobic004G322100 Sobic003G205600--Sobic004G322100 Sobic003G205600--Sobic010G027300 Sobic008G016000 Sobic008G016000 Sobic003G205600--Sobic008G016000 Sobic001G229000 Sobic001G229000 Sobic003G205600--Sobic001G229000 Sobic006G028500 Sobic006G028500 Sobic003G205600--Sobic006G028500 Sobic003G205600--Sobic004G110700 Sobic004G271800 Sobic004G271800 Sobic003G205600--Sobic004G271800 Sobic005G022500 Sobic005G022500 Sobic008G062900--Sobic005G022500 Sobic008G062900--Sobic001G348800 Sobic001G002800 Sobic001G002800 Sobic008G062900--Sobic001G002800 Sobic006G183900 Sobic006G183900 Sobic008G062900--Sobic006G183900 Sobic001G503000 Sobic001G503000 Sobic008G062900--Sobic001G503000 Sobic006G028400 Sobic006G028400 Sobic008G062900--Sobic006G028400 Sobic005G115300 Sobic005G115300 Sobic008G062900--Sobic005G115300 Sobic007G090472 Sobic007G090472 Sobic008G062900--Sobic007G090472 Sobic003G287200 Sobic003G287200 Sobic008G062900--Sobic003G287200 Sobic005G231300 Sobic005G231300 Sobic003G083600--Sobic005G231300 Sobic001G514300 Sobic001G514300 Sobic003G083600--Sobic001G514300 Sobic009G079900 Sobic009G079900 Sobic003G083600--Sobic009G079900 Sobic008G099100 Sobic008G099100 Sobic003G083600--Sobic008G099100 Sobic002G029600 Sobic002G029600 Sobic003G083600--Sobic002G029600 Sobic001G169400 Sobic001G169400 Sobic003G083600--Sobic001G169400 Sobic003G382200 Sobic003G382200 Sobic003G083600--Sobic003G382200 Sobic001G274400 Sobic001G274400 Sobic003G083600--Sobic001G274400 Sobic008G014700 Sobic008G014700 Sobic003G083600--Sobic008G014700 Sobic005G104200 Sobic005G104200 Sobic001G348800--Sobic005G104200 Sobic001G348800--Sobic005G115300 Sobic001G238500 Sobic001G238500 Sobic001G348800--Sobic001G238500 Sobic004G126500 Sobic004G126500 Sobic001G348800--Sobic004G126500 Sobic002G238700 Sobic002G238700 Sobic001G348800--Sobic002G238700 Sobic001G348800--Sobic001G503000 Sobic004G248500 Sobic004G248500 Sobic001G348800--Sobic004G248500 Sobic002G019100 Sobic002G019100 Sobic001G348800--Sobic002G019100 Sobic006G009700 Sobic006G009700 Sobic001G348800--Sobic006G009700
Octagon: transcription factors


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