Gene annotation
Transcriptome id Sobic.010G027300.1
Synonym Sb10g002490, AHL22
Functional annotation DNA binding protein, putative, expressed
UniProt C5Z3G0
Pfam PF03479
Panther DB PTHR31100 PTHR31100:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35270 : Predicted AT-hook DNA-binding family protein
RAP-DB (Rice) LOC_Os06g04540.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a055119 , Zm00025a030060 , Zm00025a022635 , Zm00025a050111
Brachypodium KQK19955
Barley HORVU6Hr1G070090.1 , HORVU6Hr1G070090.3 , HORVU6Hr1G070090.4 , HORVU6Hr1G070090.5 , HORVU0Hr1G011700.1 , HORVU7Hr1G046930.1 , HORVU6Hr1G091740.1 , HORVU6Hr1G091740.3 , HORVU6Hr1G091740.2 , HORVU6Hr1G010470.1 , HORVU6Hr1G010470.2 , HORVU7Hr1G017700.2 , HORVU7Hr1G017700.3 , HORVU7Hr1G017700.1 , HORVU7Hr1G017700.4
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G205600 uncharacterized protein At4g06744 precursor, putative, expressed -
2 Sobic.001G264000 dehydrogenase, putative, expressed K00001: E1.1.1.1, alcohol dehydrogenase
3 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
4 Sobic.003G093700 expressed protein -
5 Sobic.003G269600 "CYP711A family, the cytochrome P450 homepage. Catalyzed the conversion of carlactone (CL) to carlactonoic acid (CLA)."(PubMedID : 33793911)@Synthesized carlactonoic acid (CLA) from carlactone (CL).(PubMedID : 34970291)@cytochrome P450, putative, expressed -
6 Sobic.010G212500 - -
7 Sobic.002G404100 annexin, putative, expressed -
8 Sobic.001G430100 - -
9 Sobic.004G249000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
10 Sobic.001G161000 AGG2, putative, expressed -
11 Sobic.007G050200 DNA binding protein, putative, expressed -
12 Sobic.004G110700 DNA binding protein, putative, expressed -
13 Sobic.006G197100 DNA binding protein, putative, expressed -
14 Sobic.010G106500 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.003G399600 LTPL38 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.008G102800 expressed protein -
17 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
18 Sobic.002G326500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@TKL_IRAK_DUF26-la.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
19 Sobic.004G322100 hypro1, putative, expressed -
20 Sobic.002G185800 transporter, putative, expressed -


Gene co-expression network
sample Sobic010G027300 Sobic010G027300 Sobic003G205600 Sobic003G205600 Sobic010G027300--Sobic003G205600 Sobic001G264000 Sobic001G264000 Sobic010G027300--Sobic001G264000 Sobic004G348800 Sobic004G348800 Sobic010G027300--Sobic004G348800 Sobic003G093700 Sobic003G093700 Sobic010G027300--Sobic003G093700 Sobic003G269600 Sobic003G269600 Sobic010G027300--Sobic003G269600 Sobic010G212500 Sobic010G212500 Sobic010G027300--Sobic010G212500 Sobic002G404100 Sobic002G404100 Sobic010G027300--Sobic002G404100 Sobic001G430100 Sobic001G430100 Sobic010G027300--Sobic001G430100 Sobic004G249000 Sobic004G249000 Sobic010G027300--Sobic004G249000 Sobic003G000100 Sobic003G000100 Sobic003G205600--Sobic003G000100 Sobic003G240400 Sobic003G240400 Sobic003G205600--Sobic003G240400 Sobic004G322100 Sobic004G322100 Sobic003G205600--Sobic004G322100 Sobic003G205600--Sobic010G027300 Sobic008G016000 Sobic008G016000 Sobic003G205600--Sobic008G016000 Sobic001G229000 Sobic001G229000 Sobic003G205600--Sobic001G229000 Sobic006G028500 Sobic006G028500 Sobic003G205600--Sobic006G028500 Sobic004G110700 Sobic004G110700 Sobic003G205600--Sobic004G110700 Sobic004G271800 Sobic004G271800 Sobic003G205600--Sobic004G271800 Sobic006G197100 Sobic006G197100 Sobic001G264000--Sobic006G197100 Sobic001G264000--Sobic004G348800 Sobic004G042000 Sobic004G042000 Sobic001G264000--Sobic004G042000 Sobic002G185800 Sobic002G185800 Sobic001G264000--Sobic002G185800 Sobic009G035300 Sobic009G035300 Sobic001G264000--Sobic009G035300 Sobic006G256900 Sobic006G256900 Sobic001G264000--Sobic006G256900 Sobic001G264000--Sobic004G249000 Sobic001G264000--Sobic003G269600 Sobic002G003800 Sobic002G003800 Sobic001G264000--Sobic002G003800 Sobic004G348800--Sobic001G264000 Sobic005G215400 Sobic005G215400 Sobic004G348800--Sobic005G215400 Sobic004G348800--Sobic010G212500 Sobic004G348800--Sobic001G430100 Sobic004G348800--Sobic002G003800 Sobic004G348800--Sobic006G197100 Sobic009G109000 Sobic009G109000 Sobic004G348800--Sobic009G109000 Sobic003G311800 Sobic003G311800 Sobic004G348800--Sobic003G311800 Sobic007G050200 Sobic007G050200 Sobic004G348800--Sobic007G050200 Sobic010G106500 Sobic010G106500 Sobic003G093700--Sobic010G106500 Sobic010G271300 Sobic010G271300 Sobic003G093700--Sobic010G271300 Sobic002G213600 Sobic002G213600 Sobic003G093700--Sobic002G213600 Sobic001G508532 Sobic001G508532 Sobic003G093700--Sobic001G508532 Sobic004G295100 Sobic004G295100 Sobic003G093700--Sobic004G295100 Sobic003G093700--Sobic004G348800 Sobic001G304201 Sobic001G304201 Sobic003G093700--Sobic001G304201 Sobic002G326500 Sobic002G326500 Sobic003G093700--Sobic002G326500 Sobic003G093700--Sobic003G311800 Sobic003G269600--Sobic004G110700 Sobic003G399600 Sobic003G399600 Sobic003G269600--Sobic003G399600 Sobic006G274933 Sobic006G274933 Sobic003G269600--Sobic006G274933 Sobic006G150100 Sobic006G150100 Sobic003G269600--Sobic006G150100 Sobic002G183700 Sobic002G183700 Sobic003G269600--Sobic002G183700 Sobic003G269600--Sobic010G106500 Sobic003G121100 Sobic003G121100 Sobic003G269600--Sobic003G121100 Sobic003G140700 Sobic003G140700 Sobic003G269600--Sobic003G140700 Sobic006G170600 Sobic006G170600 Sobic003G269600--Sobic006G170600 Sobic002G261500 Sobic002G261500 Sobic010G212500--Sobic002G261500 Sobic010G212500--Sobic004G348800 Sobic002G365801 Sobic002G365801 Sobic010G212500--Sobic002G365801 Sobic002G365550 Sobic002G365550 Sobic010G212500--Sobic002G365550 Sobic001G395800 Sobic001G395800 Sobic010G212500--Sobic001G395800 Sobic003G119500 Sobic003G119500 Sobic010G212500--Sobic003G119500 Sobic003G053400 Sobic003G053400 Sobic010G212500--Sobic003G053400 Sobic010G212500--Sobic003G311800 Sobic010G212500--Sobic009G109000 Sobic002G404100--Sobic006G028500 Sobic002G216100 Sobic002G216100 Sobic002G404100--Sobic002G216100 Sobic010G148800 Sobic010G148800 Sobic002G404100--Sobic010G148800 Sobic002G404100--Sobic003G240400 Sobic001G360500 Sobic001G360500 Sobic002G404100--Sobic001G360500 Sobic005G065900 Sobic005G065900 Sobic002G404100--Sobic005G065900 Sobic002G404100--Sobic004G348800 Sobic004G322800 Sobic004G322800 Sobic002G404100--Sobic004G322800 Sobic010G082000 Sobic010G082000 Sobic002G404100--Sobic010G082000 Sobic001G430100--Sobic002G183700 Sobic001G430100--Sobic003G311800 Sobic001G430100--Sobic007G050200 Sobic001G049900 Sobic001G049900 Sobic001G430100--Sobic001G049900 Sobic002G001700 Sobic002G001700 Sobic001G430100--Sobic002G001700 Sobic001G430100--Sobic004G348800 Sobic004G297900 Sobic004G297900 Sobic001G430100--Sobic004G297900 Sobic001G430100--Sobic006G197100 Sobic001G430100--Sobic009G109000 Sobic004G249000--Sobic001G264000 Sobic004G249000--Sobic004G348800 Sobic004G249000--Sobic002G404100 Sobic006G028400 Sobic006G028400 Sobic004G249000--Sobic006G028400 Sobic004G249000--Sobic010G212500 Sobic004G283900 Sobic004G283900 Sobic004G249000--Sobic004G283900 Sobic003G203600 Sobic003G203600 Sobic004G249000--Sobic003G203600 Sobic004G249000--Sobic003G269600 Sobic002G124500 Sobic002G124500 Sobic004G249000--Sobic002G124500
Octagon: transcription factors


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