Gene annotation
Transcriptome id Sobic.003G205600.1
Synonym Sb03g026730
Functional annotation uncharacterized protein At4g06744 precursor, putative, expressed
UniProt C5XPK9
Pfam PF13855
Panther DB PTHR32093 PTHR32093:SF35
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G18670 : Leucine-rich repeat (LRR) family protein
RAP-DB (Rice) LOC_Os05g08770.1 : uncharacterized protein At4g06744 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a016581 , Zm00025a037054 , Zm00025a035770 , Zm00025a028597 , Zm00025a043105 , Zm00025a023166 , Zm00025a041768 , Zm00025a024511 , Zm00025a016087
Brachypodium KQK17443 , PNT72312 , KQK07207 , KQK20631 , KQK03023 , KQK14049 , KQK04276 , KQJ93239 , KQK12721
Barley HORVU6Hr1G019290.3 , HORVU5Hr1G024380.2 , HORVU5Hr1G024380.3 , HORVU5Hr1G024380.4 , HORVU5Hr1G024380.5 , HORVU6Hr1G019290.6 , HORVU6Hr1G019290.5 , HORVU6Hr1G019290.4 , HORVU6Hr1G019290.2 , HORVU6Hr1G019290.1 , HORVU7Hr1G096310.2 , HORVU7Hr1G096310.3 , HORVU7Hr1G096310.1 , HORVU3Hr1G051610.2 , HORVU3Hr1G051610.3 , HORVU3Hr1G051610.1 , HORVU3Hr1G051610.4 , HORVU1Hr1G026650.2 , HORVU1Hr1G026650.3 , HORVU1Hr1G026650.1 , HORVU1Hr1G026650.6 , HORVU1Hr1G026650.4 , HORVU1Hr1G026650.5
Wheat TraesCS5A02G436000 , TraesCS3D02G119800 , TraesCS5D02G443700 , TraesCS5B02G439200 , TraesCS6A02G108000 , TraesCS6B02G136600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -
2 Sobic.003G240400 leaf senescence related protein, putative, expressed -
3 Sobic.004G322100 hypro1, putative, expressed -
4 Sobic.010G027300 DNA binding protein, putative, expressed -
5 Sobic.008G016000 major facilitator superfamily antiporter, putative, expressed -
6 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
7 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
8 Sobic.004G110700 DNA binding protein, putative, expressed -
9 Sobic.004G271800 WRKY66, expressed -
10 Sobic.007G158800 patatin, putative, expressed -
11 Sobic.010G152400 glycosyltransferase, putative, expressed -
12 Sobic.008G035800 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
13 Sobic.006G003100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF1295 domain containing protein, putative, expressed -
14 Sobic.006G282300 - -
15 Sobic.003G140700 peroxidase precursor, putative, expressed -
16 Sobic.010G212500 - -
17 Sobic.010G082000 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
18 Sobic.006G019700 transferase family protein, putative, expressed -
19 Sobic.004G306900 amino acid transporter, putative, expressed -
20 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -


Gene co-expression network
sample Sobic003G205600 Sobic003G205600 Sobic003G000100 Sobic003G000100 Sobic003G205600--Sobic003G000100 Sobic003G240400 Sobic003G240400 Sobic003G205600--Sobic003G240400 Sobic004G322100 Sobic004G322100 Sobic003G205600--Sobic004G322100 Sobic010G027300 Sobic010G027300 Sobic003G205600--Sobic010G027300 Sobic008G016000 Sobic008G016000 Sobic003G205600--Sobic008G016000 Sobic001G229000 Sobic001G229000 Sobic003G205600--Sobic001G229000 Sobic006G028500 Sobic006G028500 Sobic003G205600--Sobic006G028500 Sobic004G110700 Sobic004G110700 Sobic003G205600--Sobic004G110700 Sobic004G271800 Sobic004G271800 Sobic003G205600--Sobic004G271800 Sobic010G152400 Sobic010G152400 Sobic003G000100--Sobic010G152400 Sobic003G000100--Sobic004G322100 Sobic006G003100 Sobic006G003100 Sobic003G000100--Sobic006G003100 Sobic004G306900 Sobic004G306900 Sobic003G000100--Sobic004G306900 Sobic006G092700 Sobic006G092700 Sobic003G000100--Sobic006G092700 Sobic004G106100 Sobic004G106100 Sobic003G000100--Sobic004G106100 Sobic003G000100--Sobic004G271800 Sobic003G000100--Sobic003G240400 Sobic007G086300 Sobic007G086300 Sobic003G000100--Sobic007G086300 Sobic010G082000 Sobic010G082000 Sobic003G240400--Sobic010G082000 Sobic003G215300 Sobic003G215300 Sobic003G240400--Sobic003G215300 Sobic001G263300 Sobic001G263300 Sobic003G240400--Sobic001G263300 Sobic006G196400 Sobic006G196400 Sobic003G240400--Sobic006G196400 Sobic007G090600 Sobic007G090600 Sobic003G240400--Sobic007G090600 Sobic003G240400--Sobic010G152400 Sobic003G240400--Sobic006G028500 Sobic003G240400--Sobic003G000100 Sobic008G035800 Sobic008G035800 Sobic003G240400--Sobic008G035800 Sobic004G322100--Sobic003G000100 Sobic004G322100--Sobic010G152400 Sobic003G140700 Sobic003G140700 Sobic004G322100--Sobic003G140700 Sobic004G323300 Sobic004G323300 Sobic004G322100--Sobic004G323300 Sobic004G322100--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic004G322100--Sobic006G019700 Sobic004G029100 Sobic004G029100 Sobic004G322100--Sobic004G029100 Sobic004G322100--Sobic006G028500 Sobic004G322100--Sobic004G110700 Sobic010G027300--Sobic003G205600 Sobic001G264000 Sobic001G264000 Sobic010G027300--Sobic001G264000 Sobic004G348800 Sobic004G348800 Sobic010G027300--Sobic004G348800 Sobic003G093700 Sobic003G093700 Sobic010G027300--Sobic003G093700 Sobic003G269600 Sobic003G269600 Sobic010G027300--Sobic003G269600 Sobic010G212500 Sobic010G212500 Sobic010G027300--Sobic010G212500 Sobic002G404100 Sobic002G404100 Sobic010G027300--Sobic002G404100 Sobic001G430100 Sobic001G430100 Sobic010G027300--Sobic001G430100 Sobic004G249000 Sobic004G249000 Sobic010G027300--Sobic004G249000 Sobic002G326500 Sobic002G326500 Sobic008G016000--Sobic002G326500 Sobic008G016000--Sobic004G322100 Sobic008G016000--Sobic003G000100 Sobic008G016000--Sobic004G271800 Sobic003G399600 Sobic003G399600 Sobic008G016000--Sobic003G399600 Sobic002G183700 Sobic002G183700 Sobic008G016000--Sobic002G183700 Sobic008G016000--Sobic004G110700 Sobic008G016000--Sobic003G140700 Sobic009G150500 Sobic009G150500 Sobic008G016000--Sobic009G150500 Sobic007G158800 Sobic007G158800 Sobic001G229000--Sobic007G158800 Sobic001G229000--Sobic006G028500 Sobic001G229000--Sobic004G322100 Sobic001G502000 Sobic001G502000 Sobic001G229000--Sobic001G502000 Sobic001G229000--Sobic007G086300 Sobic001G229000--Sobic004G110700 Sobic001G229000--Sobic010G152400 Sobic001G229000--Sobic004G306900 Sobic008G019800 Sobic008G019800 Sobic001G229000--Sobic008G019800 Sobic006G028500--Sobic004G306900 Sobic006G028500--Sobic006G019700 Sobic006G028500--Sobic004G110700 Sobic006G028500--Sobic001G229000 Sobic006G028500--Sobic003G240400 Sobic006G028500--Sobic010G082000 Sobic006G028500--Sobic004G322100 Sobic006G028500--Sobic010G152400 Sobic006G028500--Sobic003G000100 Sobic004G110700--Sobic006G028500 Sobic004G110700--Sobic003G269600 Sobic006G150100 Sobic006G150100 Sobic004G110700--Sobic006G150100 Sobic004G110700--Sobic003G140700 Sobic002G003700 Sobic002G003700 Sobic004G110700--Sobic002G003700 Sobic004G110700--Sobic004G322100 Sobic005G127400 Sobic005G127400 Sobic004G110700--Sobic005G127400 Sobic004G110700--Sobic001G229000 Sobic004G110700--Sobic006G019700 Sobic004G271800--Sobic003G000100 Sobic004G271800--Sobic003G240400 Sobic004G271800--Sobic010G152400 Sobic004G271800--Sobic004G322100 Sobic004G271800--Sobic006G019700 Sobic004G271800--Sobic006G092700 Sobic004G271800--Sobic003G215300 Sobic004G271800--Sobic008G035800 Sobic004G271800--Sobic004G106100
Octagon: transcription factors


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