Gene annotation
Transcriptome id Sobic.002G096900.2
Synonym ATATG3, Sb02g007970, ATG3
Functional annotation autophagy-related protein 3, putative, expressed
UniProt A0A1W0W345
Pfam PF10381 PF03986
Panther DB PTHR12866
NCBI CDD KOG2981; Protein involved in autophagocytosis during starvation
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G61500 : autophagy 3 (APG3)
RAP-DB (Rice) LOC_Os01g10290.2 : autophagy-related protein 3, putative, expressed
MaizeGDB (Corn) Zm00025a051966 , Zm00025a048558
Brachypodium KQJ97797
Barley HORVU1Hr1G056110.2 , HORVU1Hr1G056110.3 , HORVU1Hr1G056110.1 , HORVU1Hr1G056110.4
Wheat TraesCS1A02G220200 , TraesCS1A02G220200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G155700 - -
2 Sobic.007G087400 amino acid transporter, putative, expressed -
3 Sobic.010G062400 expressed protein -
4 Sobic.008G014700 domain of unknown function, DUF250 domain containing protein, expressed -
5 Sobic.007G154100 aspartic proteinase nepenthesin precursor, putative, expressed -
6 Sobic.009G153500 ankyrin repeat family protein, putative, expressed -
7 Sobic.010G230300 galactosyltransferase, putative, expressed -
8 Sobic.005G066366 - -
9 Sobic.005G110511 - -
10 Sobic.002G222600 aspartic proteinase nepenthesin precursor, putative, expressed -
11 Sobic.004G312500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@nitrate reductase, putative, expressed K10534: nitrate reductase (NAD(P)H)
12 Sobic.005G106300 expressed protein -
13 Sobic.007G186700 resistance protein, putative, expressed -
14 Sobic.005G197400 NBS-LRR disease resistance protein, putative, expressed -
15 Sobic.002G258900 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@auxin responsive protein, putative, expressed K14488: SAUR family protein
16 Sobic.004G339800 phosphate transporter 1, putative, expressed -
17 Sobic.010G242800 disease resistance protein RGA3, putative, expressed -
18 Sobic.004G009200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
19 Sobic.002G214200 ferric reductase, putative, expressed K13447: respiratory burst oxidase
20 Sobic.005G197500 NBS-LRR disease resistance protein, putative, expressed -


Gene co-expression network
sample Sobic002G096900 Sobic002G096900 Sobic002G155700 Sobic002G155700 Sobic002G096900--Sobic002G155700 Sobic007G087400 Sobic007G087400 Sobic002G096900--Sobic007G087400 Sobic010G062400 Sobic010G062400 Sobic002G096900--Sobic010G062400 Sobic008G014700 Sobic008G014700 Sobic002G096900--Sobic008G014700 Sobic007G154100 Sobic007G154100 Sobic002G096900--Sobic007G154100 Sobic009G153500 Sobic009G153500 Sobic002G096900--Sobic009G153500 Sobic010G230300 Sobic010G230300 Sobic002G096900--Sobic010G230300 Sobic005G066366 Sobic005G066366 Sobic002G096900--Sobic005G066366 Sobic005G110511 Sobic005G110511 Sobic002G096900--Sobic005G110511 Sobic002G155700--Sobic002G096900 Sobic002G155700--Sobic009G153500 Sobic002G155700--Sobic007G087400 Sobic002G155700--Sobic010G230300 Sobic004G021400 Sobic004G021400 Sobic002G155700--Sobic004G021400 Sobic004G160500 Sobic004G160500 Sobic002G155700--Sobic004G160500 Sobic007G083000 Sobic007G083000 Sobic002G155700--Sobic007G083000 Sobic004G232600 Sobic004G232600 Sobic002G155700--Sobic004G232600 Sobic008G122500 Sobic008G122500 Sobic002G155700--Sobic008G122500 Sobic007G087400--Sobic004G021400 Sobic007G087400--Sobic009G153500 Sobic007G087400--Sobic004G160500 Sobic007G087400--Sobic007G154100 Sobic007G087400--Sobic010G062400 Sobic007G087400--Sobic002G096900 Sobic007G087400--Sobic002G155700 Sobic003G079100 Sobic003G079100 Sobic007G087400--Sobic003G079100 Sobic002G222600 Sobic002G222600 Sobic007G087400--Sobic002G222600 Sobic010G062400--Sobic002G222600 Sobic005G197400 Sobic005G197400 Sobic010G062400--Sobic005G197400 Sobic010G242800 Sobic010G242800 Sobic010G062400--Sobic010G242800 Sobic005G097900 Sobic005G097900 Sobic010G062400--Sobic005G097900 Sobic005G197500 Sobic005G197500 Sobic010G062400--Sobic005G197500 Sobic004G009200 Sobic004G009200 Sobic010G062400--Sobic004G009200 Sobic008G033100 Sobic008G033100 Sobic010G062400--Sobic008G033100 Sobic005G182900 Sobic005G182900 Sobic010G062400--Sobic005G182900 Sobic010G062400--Sobic005G066366 Sobic008G014700--Sobic010G242800 Sobic002G029500 Sobic002G029500 Sobic008G014700--Sobic002G029500 Sobic008G014700--Sobic005G110511 Sobic007G064900 Sobic007G064900 Sobic008G014700--Sobic007G064900 Sobic001G293100 Sobic001G293100 Sobic008G014700--Sobic001G293100 Sobic008G014700--Sobic005G182900 Sobic008G014700--Sobic005G097900 Sobic008G014700--Sobic008G033100 Sobic007G015000 Sobic007G015000 Sobic008G014700--Sobic007G015000 Sobic004G312500 Sobic004G312500 Sobic007G154100--Sobic004G312500 Sobic006G209000 Sobic006G209000 Sobic007G154100--Sobic006G209000 Sobic006G108300 Sobic006G108300 Sobic007G154100--Sobic006G108300 Sobic007G154100--Sobic004G009200 Sobic010G152500 Sobic010G152500 Sobic007G154100--Sobic010G152500 Sobic005G071900 Sobic005G071900 Sobic007G154100--Sobic005G071900 Sobic007G154100--Sobic003G079100 Sobic009G106100 Sobic009G106100 Sobic007G154100--Sobic009G106100 Sobic005G182800 Sobic005G182800 Sobic007G154100--Sobic005G182800 Sobic009G153500--Sobic002G155700 Sobic009G153500--Sobic004G021400 Sobic009G153500--Sobic007G087400 Sobic009G153500--Sobic004G232600 Sobic003G205600 Sobic003G205600 Sobic009G153500--Sobic003G205600 Sobic009G153500--Sobic004G160500 Sobic009G153500--Sobic002G096900 Sobic001G348800 Sobic001G348800 Sobic009G153500--Sobic001G348800 Sobic009G153500--Sobic010G230300 Sobic010G230300--Sobic007G083000 Sobic010G230300--Sobic008G122500 Sobic003G430100 Sobic003G430100 Sobic010G230300--Sobic003G430100 Sobic004G210000 Sobic004G210000 Sobic010G230300--Sobic004G210000 Sobic005G226000 Sobic005G226000 Sobic010G230300--Sobic005G226000 Sobic010G230300--Sobic002G155700 Sobic001G458400 Sobic001G458400 Sobic010G230300--Sobic001G458400 Sobic007G208200 Sobic007G208200 Sobic010G230300--Sobic007G208200 Sobic003G149600 Sobic003G149600 Sobic010G230300--Sobic003G149600 Sobic005G066366--Sobic010G242800 Sobic005G066366--Sobic005G110511 Sobic005G197350 Sobic005G197350 Sobic005G066366--Sobic005G197350 Sobic005G066366--Sobic005G197400 Sobic005G066366--Sobic008G033100 Sobic005G066366--Sobic005G197500 Sobic005G066366--Sobic005G182900 Sobic005G066500 Sobic005G066500 Sobic005G066366--Sobic005G066500 Sobic003G161400 Sobic003G161400 Sobic005G066366--Sobic003G161400 Sobic005G110511--Sobic005G066500 Sobic005G110511--Sobic010G242800 Sobic005G110511--Sobic005G066366 Sobic005G110511--Sobic004G312500 Sobic005G065700 Sobic005G065700 Sobic005G110511--Sobic005G065700 Sobic005G110511--Sobic005G071900 Sobic005G110511--Sobic002G029500 Sobic005G110511--Sobic007G064900 Sobic005G110511--Sobic008G033100
Octagon: transcription factors


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