Gene annotation
Transcriptome id Sobic.007G186700.3,Sobic.007G186700.2
Synonym RPS3, RPM1
Functional annotation resistance protein, putative, expressed
UniProt A0A1Z5RAL9 , A0A1Z5RAQ9
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF529
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein,HOPZ-ACTIVATED RESISTANCE 1
RAP-DB (Rice) LOC_Os08g42670.1,LOC_Os08g42670.2 : resistance protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK08096 , PNT72119
Barley HORVU7Hr1G055790.3 , HORVU7Hr1G055790.2 , HORVU7Hr1G055790.1 , HORVU7Hr1G055790.4 , HORVU3Hr1G113780.11 , HORVU3Hr1G113780.10 , HORVU3Hr1G113780.13 , HORVU3Hr1G113780.12 , HORVU3Hr1G113790.1 , HORVU3Hr1G113810.1 , HORVU3Hr1G113780.9 , HORVU3Hr1G113780.8 , HORVU3Hr1G113780.5 , HORVU3Hr1G113780.4 , HORVU3Hr1G113780.7 , HORVU3Hr1G113780.6 , HORVU3Hr1G113780.1 , HORVU3Hr1G113780.3 , HORVU3Hr1G113780.2
Wheat TraesCS3D02G526600 , TraesCS7A02G101700 , TraesCS4D02G360500 , TraesCS7A02G101700 , TraesCS7D02G096000 , TraesCS6B02G458100 , TraesCS3B02G588800 , TraesCS3B02G589700 , TraesCS4A02G400100 , TraesCS3B02G589500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G121000 purine permease, putative, expressed -
2 Sobic.002G178200 - -
3 Sobic.004G002901 - K02940: RP-L9e, large subunit ribosomal protein L9e
4 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
5 Sobic.005G060200 cytochrome P450, putative, expressed -
6 Sobic.007G111800 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
7 Sobic.006G229901 - -
8 Sobic.007G015000 methyltransferase domain containing protein, expressed -
9 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
10 Sobic.003G443700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
11 Sobic.002G178101 - -
12 Sobic.005G106300 expressed protein -
13 Sobic.005G197500 NBS-LRR disease resistance protein, putative, expressed -
14 Sobic.003G317300 "a rapidly evolving gene family, termed Rp1/Pi37, which had an effector response that confers resistance to multiple pathogens across species."(PubMedID : 25928459)@rp1, putative, expressed -
15 Sobic.004G299500 - -
16 Sobic.001G293100 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.008G105800 cytochrome P450, putative, expressed -
18 Sobic.005G097900 major facilitator superfamily antiporter, putative, expressed -
19 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
20 Sobic.005G069166 - -


Gene co-expression network
sample Sobic007G186700 Sobic007G186700 Sobic006G121000 Sobic006G121000 Sobic007G186700--Sobic006G121000 Sobic002G178200 Sobic002G178200 Sobic007G186700--Sobic002G178200 Sobic004G002901 Sobic004G002901 Sobic007G186700--Sobic004G002901 Sobic005G216400 Sobic005G216400 Sobic007G186700--Sobic005G216400 Sobic005G060200 Sobic005G060200 Sobic007G186700--Sobic005G060200 Sobic007G111800 Sobic007G111800 Sobic007G186700--Sobic007G111800 Sobic006G229901 Sobic006G229901 Sobic007G186700--Sobic006G229901 Sobic007G015000 Sobic007G015000 Sobic007G186700--Sobic007G015000 Sobic007G212000 Sobic007G212000 Sobic007G186700--Sobic007G212000 Sobic006G121000--Sobic002G178200 Sobic008G105800 Sobic008G105800 Sobic006G121000--Sobic008G105800 Sobic006G121000--Sobic005G216400 Sobic004G299500 Sobic004G299500 Sobic006G121000--Sobic004G299500 Sobic006G121000--Sobic007G015000 Sobic006G121000--Sobic007G212000 Sobic005G069166 Sobic005G069166 Sobic006G121000--Sobic005G069166 Sobic002G178101 Sobic002G178101 Sobic006G121000--Sobic002G178101 Sobic005G069332 Sobic005G069332 Sobic006G121000--Sobic005G069332 Sobic002G178200--Sobic006G121000 Sobic002G178200--Sobic005G216400 Sobic002G178200--Sobic002G178101 Sobic002G178200--Sobic007G212000 Sobic002G178200--Sobic006G229901 Sobic007G202480 Sobic007G202480 Sobic002G178200--Sobic007G202480 Sobic002G178200--Sobic008G105800 Sobic002G178200--Sobic004G299500 Sobic002G178200--Sobic005G069166 Sobic004G002901--Sobic005G060200 Sobic005G197500 Sobic005G197500 Sobic004G002901--Sobic005G197500 Sobic010G268700 Sobic010G268700 Sobic004G002901--Sobic010G268700 Sobic004G346300 Sobic004G346300 Sobic004G002901--Sobic004G346300 Sobic001G271300 Sobic001G271300 Sobic004G002901--Sobic001G271300 Sobic004G002901--Sobic007G111800 Sobic004G002901--Sobic007G212000 Sobic010G245400 Sobic010G245400 Sobic004G002901--Sobic010G245400 Sobic003G443700 Sobic003G443700 Sobic004G002901--Sobic003G443700 Sobic003G357700 Sobic003G357700 Sobic005G216400--Sobic003G357700 Sobic005G216400--Sobic002G178101 Sobic005G216400--Sobic008G105800 Sobic005G216400--Sobic006G121000 Sobic005G216400--Sobic007G212000 Sobic005G216400--Sobic005G060200 Sobic005G216400--Sobic003G443700 Sobic005G216400--Sobic002G178200 Sobic005G216400--Sobic004G346300 Sobic005G060200--Sobic010G268700 Sobic005G060200--Sobic005G216400 Sobic005G060200--Sobic004G002901 Sobic005G060200--Sobic006G121000 Sobic005G060200--Sobic005G197500 Sobic005G060200--Sobic007G212000 Sobic005G060200--Sobic003G443700 Sobic005G060200--Sobic002G178101 Sobic005G060200--Sobic007G015000 Sobic006G097900 Sobic006G097900 Sobic007G111800--Sobic006G097900 Sobic007G111800--Sobic007G015000 Sobic007G111800--Sobic010G268700 Sobic007G111800--Sobic001G271300 Sobic007G111800--Sobic007G212000 Sobic001G293100 Sobic001G293100 Sobic007G111800--Sobic001G293100 Sobic005G106300 Sobic005G106300 Sobic007G111800--Sobic005G106300 Sobic010G152500 Sobic010G152500 Sobic007G111800--Sobic010G152500 Sobic003G083800 Sobic003G083800 Sobic007G111800--Sobic003G083800 Sobic006G229901--Sobic007G202480 Sobic006G229901--Sobic004G299500 Sobic003G045650 Sobic003G045650 Sobic006G229901--Sobic003G045650 Sobic001G395900 Sobic001G395900 Sobic006G229901--Sobic001G395900 Sobic006G230100 Sobic006G230100 Sobic006G229901--Sobic006G230100 Sobic001G153100 Sobic001G153100 Sobic006G229901--Sobic001G153100 Sobic006G229901--Sobic005G069166 Sobic008G058600 Sobic008G058600 Sobic006G229901--Sobic008G058600 Sobic006G229901--Sobic005G069332 Sobic007G015000--Sobic006G230100 Sobic007G015000--Sobic004G299500 Sobic007G015000--Sobic001G293100 Sobic001G415100 Sobic001G415100 Sobic007G015000--Sobic001G415100 Sobic007G015000--Sobic007G212000 Sobic005G097900 Sobic005G097900 Sobic007G015000--Sobic005G097900 Sobic007G015000--Sobic005G069166 Sobic007G015000--Sobic007G202480 Sobic007G015000--Sobic008G105800 Sobic007G212000--Sobic007G015000 Sobic007G212000--Sobic006G230100 Sobic007G212000--Sobic008G105800 Sobic007G212000--Sobic005G216400 Sobic007G212000--Sobic006G121000 Sobic007G212000--Sobic007G202480 Sobic007G212000--Sobic004G299500 Sobic007G212000--Sobic005G060200 Sobic001G181600 Sobic001G181600 Sobic007G212000--Sobic001G181600
Octagon: transcription factors


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