Gene annotation
Transcriptome id Sobic.003G317300.2
Synonym Sb03g036450, Rp1-dp3
Functional annotation "a rapidly evolving gene family, termed Rp1/Pi37, which had an effector response that confers resistance to multiple pathogens across species." (PubMedID : 25928459)
rp1, putative, expressed
UniProt A0A1W0VZX7
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF627
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14460 : LRR and NB-ARC domains-containing disease resistance protein
RAP-DB (Rice) LOC_Os01g57340.1 : rp1, putative, expressed
MaizeGDB (Corn) Zm00025a053792
Brachypodium PNT72981 , KQK10078 , PNT72980
Barley HORVU7Hr1G001540.44 , HORVU7Hr1G001540.45 , HORVU7Hr1G001540.40 , HORVU7Hr1G001540.41 , HORVU7Hr1G001540.42 , HORVU7Hr1G001540.43 , HORVU0Hr1G030390.1 , HORVU3Hr1G076910.14 , HORVU3Hr1G076910.15 , HORVU3Hr1G076910.16 , HORVU3Hr1G076910.10 , HORVU3Hr1G076910.11 , HORVU3Hr1G076910.12 , HORVU3Hr1G076910.13 , HORVU7Hr1G001540.9 , HORVU7Hr1G001540.3 , HORVU7Hr1G001540.36 , HORVU3Hr1G076910.8 , HORVU3Hr1G076910.9 , HORVU3Hr1G076910.6 , HORVU3Hr1G076910.7 , HORVU3Hr1G076910.4 , HORVU3Hr1G076910.5 , HORVU3Hr1G076910.2 , HORVU3Hr1G076910.3 , HORVU3Hr1G076910.1 , HORVU7Hr1G001540.27 , HORVU7Hr1G001700.1 , HORVU7Hr1G001540.26 , HORVU7Hr1G001540.8 , HORVU7Hr1G001540.2 , HORVU7Hr1G001540.1 , HORVU7Hr1G001540.7 , HORVU7Hr1G001540.6 , HORVU7Hr1G001540.5 , HORVU7Hr1G001540.4 , HORVU7Hr1G001540.19 , HORVU7Hr1G001540.18 , HORVU7Hr1G001540.13 , HORVU7Hr1G001540.12 , HORVU7Hr1G001540.11 , HORVU7Hr1G001540.10 , HORVU7Hr1G001540.17 , HORVU7Hr1G001540.16 , HORVU7Hr1G001540.15 , HORVU7Hr1G001540.14 , HORVU0Hr1G027280.1 , HORVU7Hr1G001670.1 , HORVU7Hr1G001670.2 , HORVU7Hr1G001670.4 , HORVU7Hr1G001540.22 , HORVU7Hr1G001540.20 , HORVU7Hr1G001540.21 , HORVU7Hr1G001540.24 , HORVU7Hr1G001540.25 , HORVU7Hr1G001540.39 , HORVU7Hr1G001540.38 , HORVU7Hr1G001540.35 , HORVU7Hr1G001540.34 , HORVU7Hr1G001540.37 , HORVU7Hr1G001540.31 , HORVU7Hr1G001540.30 , HORVU7Hr1G001540.33 , HORVU7Hr1G001540.32 , HORVU7Hr1G001510.1 , HORVU6Hr1G015590.1 , HORVU7Hr1G001540.23 , HORVU7Hr1G001540.28 , HORVU7Hr1G001540.29
Wheat TraesCS4A02G475700 , TraesCS4A02G477800 , TraesCS4A02G479700 , TraesCS4A02G476600 , TraesCS4A02G476600 , TraesCS4A02G477300 , TraesCS1D02G386200 , TraesCS7D02G013600 , TraesCS4A02G479400 , TraesCS3B02G349600 , TraesCS2D02G560600 , TraesCS3B02G349600 , TraesCS4A02G478600 , TraesCS4A02G475900 , TraesCS4A02G475900 , TraesCS4A02G475400 , TraesCS7D02G012900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G121000 purine permease, putative, expressed -
2 Sobic.005G069166 - -
3 Sobic.007G015000 methyltransferase domain containing protein, expressed -
4 Sobic.004G299500 - -
5 Sobic.006G230100 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
6 Sobic.002G178200 - -
7 Sobic.008G105800 cytochrome P450, putative, expressed -
8 Sobic.001G293100 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.005G069332 - -
10 Sobic.001G415100 terpene synthase, putative, expressed -
11 Sobic.005G097900 major facilitator superfamily antiporter, putative, expressed -
12 Sobic.006G229901 - -
13 Sobic.008G033100 protein kinase domain containing protein, expressed K17302: COPB2, coatomer subunit beta'
14 Sobic.007G202480 - -
15 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
16 Sobic.010G242800 disease resistance protein RGA3, putative, expressed -
17 Sobic.009G055300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
19 Sobic.007G064900 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
20 Sobic.005G060200 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic003G317300 Sobic003G317300 Sobic006G121000 Sobic006G121000 Sobic003G317300--Sobic006G121000 Sobic005G069166 Sobic005G069166 Sobic003G317300--Sobic005G069166 Sobic007G015000 Sobic007G015000 Sobic003G317300--Sobic007G015000 Sobic004G299500 Sobic004G299500 Sobic003G317300--Sobic004G299500 Sobic006G230100 Sobic006G230100 Sobic003G317300--Sobic006G230100 Sobic002G178200 Sobic002G178200 Sobic003G317300--Sobic002G178200 Sobic008G105800 Sobic008G105800 Sobic003G317300--Sobic008G105800 Sobic001G293100 Sobic001G293100 Sobic003G317300--Sobic001G293100 Sobic005G069332 Sobic005G069332 Sobic003G317300--Sobic005G069332 Sobic006G121000--Sobic002G178200 Sobic006G121000--Sobic008G105800 Sobic005G216400 Sobic005G216400 Sobic006G121000--Sobic005G216400 Sobic006G121000--Sobic004G299500 Sobic006G121000--Sobic007G015000 Sobic007G212000 Sobic007G212000 Sobic006G121000--Sobic007G212000 Sobic006G121000--Sobic005G069166 Sobic002G178101 Sobic002G178101 Sobic006G121000--Sobic002G178101 Sobic006G121000--Sobic005G069332 Sobic005G069166--Sobic004G299500 Sobic005G069166--Sobic005G069332 Sobic005G069166--Sobic006G230100 Sobic007G202480 Sobic007G202480 Sobic005G069166--Sobic007G202480 Sobic001G153100 Sobic001G153100 Sobic005G069166--Sobic001G153100 Sobic006G229901 Sobic006G229901 Sobic005G069166--Sobic006G229901 Sobic005G069166--Sobic008G105800 Sobic001G395900 Sobic001G395900 Sobic005G069166--Sobic001G395900 Sobic005G069166--Sobic007G015000 Sobic007G015000--Sobic006G230100 Sobic007G015000--Sobic004G299500 Sobic007G015000--Sobic001G293100 Sobic001G415100 Sobic001G415100 Sobic007G015000--Sobic001G415100 Sobic007G015000--Sobic007G212000 Sobic005G097900 Sobic005G097900 Sobic007G015000--Sobic005G097900 Sobic007G015000--Sobic005G069166 Sobic007G015000--Sobic007G202480 Sobic007G015000--Sobic008G105800 Sobic004G299500--Sobic006G230100 Sobic004G299500--Sobic001G395900 Sobic004G299500--Sobic007G202480 Sobic004G299500--Sobic005G069166 Sobic004G299500--Sobic006G229901 Sobic004G299500--Sobic007G015000 Sobic004G299500--Sobic005G069332 Sobic004G299500--Sobic001G153100 Sobic008G058600 Sobic008G058600 Sobic004G299500--Sobic008G058600 Sobic006G230100--Sobic004G299500 Sobic006G230100--Sobic001G395900 Sobic006G230100--Sobic007G202480 Sobic006G230100--Sobic007G015000 Sobic006G230100--Sobic005G069166 Sobic009G055300 Sobic009G055300 Sobic006G230100--Sobic009G055300 Sobic006G230200 Sobic006G230200 Sobic006G230100--Sobic006G230200 Sobic006G230100--Sobic001G153100 Sobic006G230100--Sobic006G229901 Sobic002G178200--Sobic006G121000 Sobic002G178200--Sobic005G216400 Sobic002G178200--Sobic002G178101 Sobic002G178200--Sobic007G212000 Sobic002G178200--Sobic006G229901 Sobic002G178200--Sobic007G202480 Sobic002G178200--Sobic008G105800 Sobic002G178200--Sobic004G299500 Sobic002G178200--Sobic005G069166 Sobic008G105800--Sobic009G055300 Sobic008G105800--Sobic005G069332 Sobic008G105800--Sobic005G069166 Sobic008G105800--Sobic007G202480 Sobic008G105800--Sobic006G230100 Sobic008G105800--Sobic005G216400 Sobic008G105800--Sobic006G121000 Sobic008G105800--Sobic004G299500 Sobic008G105800--Sobic006G230200 Sobic001G293100--Sobic007G015000 Sobic001G293100--Sobic005G097900 Sobic008G033100 Sobic008G033100 Sobic001G293100--Sobic008G033100 Sobic010G242800 Sobic010G242800 Sobic001G293100--Sobic010G242800 Sobic003G161400 Sobic003G161400 Sobic001G293100--Sobic003G161400 Sobic005G182900 Sobic005G182900 Sobic001G293100--Sobic005G182900 Sobic001G293100--Sobic001G415100 Sobic002G029500 Sobic002G029500 Sobic001G293100--Sobic002G029500 Sobic001G293100--Sobic006G230100 Sobic005G069332--Sobic005G069166 Sobic005G069332--Sobic004G299500 Sobic005G069332--Sobic008G105800 Sobic005G069332--Sobic006G230100 Sobic005G069332--Sobic007G202480 Sobic002G063700 Sobic002G063700 Sobic005G069332--Sobic002G063700 Sobic005G069332--Sobic009G055300 Sobic005G069332--Sobic001G395900 Sobic005G069332--Sobic006G230200
Octagon: transcription factors


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