Gene annotation
| Transcriptome id | Sobic.007G064900.1 |
|---|---|
| Synonym | ZIP5, Sb07g005140 |
| Functional annotation | metal cation transporter, putative, expressed |
| UniProt | C5YI00 |
| Pfam | PF02535 |
| Panther DB | PTHR11040 PTHR11040:SF49 |
| NCBI CDD | KOG1558; Fe2+/Zn2+ regulated transporter |
| KEGG Orthology | K14709; SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3 |
| Gene Ontology | GO:0016020; membrane |
Orthologs (automatic annotation)
| TAIR | AT1G05300 : zinc transporter 5 precursor |
|---|---|
| RAP-DB (Rice) | LOC_Os05g39540.1 : metal cation transporter, putative, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | KQJ95581 |
| Barley | HORVU4Hr1G073790.1 , HORVU4Hr1G073790.2 , HORVU4Hr1G073790.3 , HORVU4Hr1G073790.4 , HORVU4Hr1G073790.5 , HORVU1Hr1G070450.9 , HORVU1Hr1G070450.8 , HORVU1Hr1G070450.3 , HORVU1Hr1G070450.2 , HORVU1Hr1G070450.1 , HORVU1Hr1G070450.7 , HORVU1Hr1G070450.6 , HORVU1Hr1G070450.5 , HORVU1Hr1G070450.4 |
| Wheat | TraesCS4B02G278600 , TraesCS1A02G297400 , TraesCS4D02G277100 , TraesCS1D02G293900 , TraesCS1B02G306400 , TraesCS4A02G025400 , TraesCS1D02G294000 , TraesCS1B02G306500 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.002G029500 | cytochrome P450 84A1, putative, expressed | K09755: CYP84A, ferulate-5-hydroxylase |
| 2 | Sobic.010G242800 | disease resistance protein RGA3, putative, expressed | - |
| 3 | Sobic.008G033100 | protein kinase domain containing protein, expressed | K17302: COPB2, coatomer subunit beta' |
| 4 | Sobic.005G097900 | major facilitator superfamily antiporter, putative, expressed | - |
| 5 | Sobic.005G182900 | NBS-LRR disease resistance protein, putative, expressed | - |
| 6 | Sobic.005G110511 | - | - |
| 7 | Sobic.002G019000 | xyloglucan fucosyltransferase, putative, expressed | K13681: xyloglucan fucosyltransferase |
| 8 | Sobic.001G415100 | terpene synthase, putative, expressed | - |
| 9 | Sobic.005G065700 | glycine-rich cell wall structural protein 2 precursor, putative, expressed | - |
| 10 | Sobic.001G293100 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 11 | Sobic.007G015000 | methyltransferase domain containing protein, expressed | - |
| 12 | Sobic.006G230100 | TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed | - |
| 13 | Sobic.010G213600 | histidine kinase, putative, expressed | - |
| 14 | Sobic.002G082000 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@kelch repeat protein, putative, expressed | - |
| 15 | Sobic.004G299500 | - | - |
| 16 | Sobic.002G391300 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 17 | Sobic.002G289500 | carbohydrate binding protein, putative, expressed | - |
| 18 | Sobic.005G226400 | RGH1A, putative, expressed | - |
| 19 | Sobic.006G171100 | expansin precursor, putative, expressed | - |
| 20 | Sobic.007G015100 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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