Gene annotation
Transcriptome id Sobic.008G014700.1
Synonym Sb08g001300
Functional annotation domain of unknown function, DUF250 domain containing protein, expressed
UniProt C5YQL0
Pfam PF03151
Panther DB PTHR11132 PTHR11132:SF80
NCBI CDD KOG1441; Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G32390 : Nucleotide-sugar transporter family protein
RAP-DB (Rice) LOC_Os12g04170.1 : domain of unknown function, DUF250 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a044087 , Zm00025a037838 , Zm00025a027175 , Zm00025a053693
Brachypodium KQK05626 , KQK10203 , KQJ92348
Barley HORVU3Hr1G078650.1 , HORVU1Hr1G067910.4 , HORVU1Hr1G067910.5 , HORVU1Hr1G067910.7 , HORVU1Hr1G067910.2 , HORVU1Hr1G067910.3 , HORVU1Hr1G067910.1 , HORVU1Hr1G067910.8 , HORVU5Hr1G044230.1 , HORVU5Hr1G044230.2
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G242800 disease resistance protein RGA3, putative, expressed -
2 Sobic.002G029500 cytochrome P450 84A1, putative, expressed K09755: CYP84A, ferulate-5-hydroxylase
3 Sobic.005G110511 - -
4 Sobic.007G064900 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
5 Sobic.001G293100 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.005G182900 NBS-LRR disease resistance protein, putative, expressed -
7 Sobic.005G097900 major facilitator superfamily antiporter, putative, expressed -
8 Sobic.008G033100 protein kinase domain containing protein, expressed K17302: COPB2, coatomer subunit beta'
9 Sobic.007G015000 methyltransferase domain containing protein, expressed -
10 Sobic.005G066366 - -
11 Sobic.005G197400 NBS-LRR disease resistance protein, putative, expressed -
12 Sobic.005G197500 NBS-LRR disease resistance protein, putative, expressed -
13 Sobic.007G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -
14 Sobic.003G255600 expressed protein -
15 Sobic.003G083800 DNA binding protein, putative, expressed -
16 Sobic.005G106300 expressed protein -
17 Sobic.004G009200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
18 Sobic.009G095800 DUF623 domain containing protein, expressed -
19 Sobic.003G161400 powdery mildew resistance protein PM3A, putative, expressed -
20 Sobic.001G272600 powdery mildew resistance protein PM3b, putative, expressed -


Gene co-expression network
sample Sobic008G014700 Sobic008G014700 Sobic010G242800 Sobic010G242800 Sobic008G014700--Sobic010G242800 Sobic002G029500 Sobic002G029500 Sobic008G014700--Sobic002G029500 Sobic005G110511 Sobic005G110511 Sobic008G014700--Sobic005G110511 Sobic007G064900 Sobic007G064900 Sobic008G014700--Sobic007G064900 Sobic001G293100 Sobic001G293100 Sobic008G014700--Sobic001G293100 Sobic005G182900 Sobic005G182900 Sobic008G014700--Sobic005G182900 Sobic005G097900 Sobic005G097900 Sobic008G014700--Sobic005G097900 Sobic008G033100 Sobic008G033100 Sobic008G014700--Sobic008G033100 Sobic007G015000 Sobic007G015000 Sobic008G014700--Sobic007G015000 Sobic010G242800--Sobic008G033100 Sobic010G242800--Sobic005G182900 Sobic003G161400 Sobic003G161400 Sobic010G242800--Sobic003G161400 Sobic010G242800--Sobic001G293100 Sobic005G066366 Sobic005G066366 Sobic010G242800--Sobic005G066366 Sobic010G242800--Sobic005G110511 Sobic010G242800--Sobic005G097900 Sobic010G242800--Sobic007G064900 Sobic010G242800--Sobic002G029500 Sobic002G029500--Sobic005G182900 Sobic002G029500--Sobic007G064900 Sobic002G029500--Sobic005G097900 Sobic005G106300 Sobic005G106300 Sobic002G029500--Sobic005G106300 Sobic002G029500--Sobic008G033100 Sobic002G289500 Sobic002G289500 Sobic002G029500--Sobic002G289500 Sobic001G415100 Sobic001G415100 Sobic002G029500--Sobic001G415100 Sobic002G029500--Sobic007G015000 Sobic002G082000 Sobic002G082000 Sobic002G029500--Sobic002G082000 Sobic005G066500 Sobic005G066500 Sobic005G110511--Sobic005G066500 Sobic005G110511--Sobic010G242800 Sobic005G110511--Sobic005G066366 Sobic004G312500 Sobic004G312500 Sobic005G110511--Sobic004G312500 Sobic005G065700 Sobic005G065700 Sobic005G110511--Sobic005G065700 Sobic005G071900 Sobic005G071900 Sobic005G110511--Sobic005G071900 Sobic005G110511--Sobic002G029500 Sobic005G110511--Sobic007G064900 Sobic005G110511--Sobic008G033100 Sobic007G064900--Sobic002G029500 Sobic007G064900--Sobic010G242800 Sobic007G064900--Sobic008G033100 Sobic007G064900--Sobic005G097900 Sobic007G064900--Sobic005G182900 Sobic007G064900--Sobic005G110511 Sobic002G019000 Sobic002G019000 Sobic007G064900--Sobic002G019000 Sobic007G064900--Sobic001G415100 Sobic007G064900--Sobic005G065700 Sobic001G293100--Sobic007G015000 Sobic001G293100--Sobic005G097900 Sobic001G293100--Sobic008G033100 Sobic001G293100--Sobic010G242800 Sobic001G293100--Sobic003G161400 Sobic001G293100--Sobic005G182900 Sobic001G293100--Sobic001G415100 Sobic001G293100--Sobic002G029500 Sobic006G230100 Sobic006G230100 Sobic001G293100--Sobic006G230100 Sobic005G182900--Sobic008G033100 Sobic005G182900--Sobic002G019000 Sobic005G182900--Sobic010G242800 Sobic005G182900--Sobic002G029500 Sobic005G182900--Sobic001G415100 Sobic005G182900--Sobic005G065700 Sobic005G182800 Sobic005G182800 Sobic005G182900--Sobic005G182800 Sobic005G182900--Sobic003G161400 Sobic005G182900--Sobic001G293100 Sobic005G097900--Sobic001G293100 Sobic005G097900--Sobic007G015000 Sobic005G097900--Sobic008G033100 Sobic005G097900--Sobic002G029500 Sobic005G097900--Sobic001G415100 Sobic005G097900--Sobic010G242800 Sobic005G097900--Sobic005G182900 Sobic005G097900--Sobic007G064900 Sobic004G299500 Sobic004G299500 Sobic005G097900--Sobic004G299500 Sobic008G033100--Sobic010G242800 Sobic008G033100--Sobic005G182900 Sobic008G033100--Sobic001G293100 Sobic008G033100--Sobic003G161400 Sobic008G033100--Sobic005G097900 Sobic008G033100--Sobic002G019000 Sobic010G213600 Sobic010G213600 Sobic008G033100--Sobic010G213600 Sobic008G033100--Sobic002G029500 Sobic008G033100--Sobic001G415100 Sobic007G015000--Sobic006G230100 Sobic007G015000--Sobic004G299500 Sobic007G015000--Sobic001G293100 Sobic007G015000--Sobic001G415100 Sobic007G212000 Sobic007G212000 Sobic007G015000--Sobic007G212000 Sobic007G015000--Sobic005G097900 Sobic005G069166 Sobic005G069166 Sobic007G015000--Sobic005G069166 Sobic007G202480 Sobic007G202480 Sobic007G015000--Sobic007G202480 Sobic008G105800 Sobic008G105800 Sobic007G015000--Sobic008G105800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.