Gene annotation
Transcriptome id Sobic.002G258900.1
Synonym Sb02g029390, SbSAUR12, small auxin up RNA
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
auxin responsive protein, putative, expressed
UniProt A0A1W0W5Y0
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF23
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT4G34750 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os09g32984.1 : auxin responsive protein, putative, expressed
MaizeGDB (Corn) Zm00025a047590 , Zm00025a014312
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G220300 OsWAK123 - OsWAK receptor-like protein kinase, expressed -
2 Sobic.002G178101 - -
3 Sobic.002G178000 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
4 Sobic.005G060200 cytochrome P450, putative, expressed -
5 Sobic.005G066200 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
6 Sobic.005G066366 - -
7 Sobic.003G443700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
8 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
9 Sobic.006G121000 purine permease, putative, expressed -
10 Sobic.010G126800 lectin-like receptor kinase 7, putative, expressed -
11 Sobic.005G162400 GATA transcription factor 25, putative, expressed -
12 Sobic.010G242800 disease resistance protein RGA3, putative, expressed -
13 Sobic.003G161400 powdery mildew resistance protein PM3A, putative, expressed -
14 Sobic.005G197500 NBS-LRR disease resistance protein, putative, expressed -
15 Sobic.005G197350 - -
16 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
17 Sobic.004G346300 expressed protein -
18 Sobic.010G268700 expansin precursor, putative, expressed -
19 Sobic.008G105800 cytochrome P450, putative, expressed -
20 Sobic.009G004950 - -


Gene co-expression network
sample Sobic002G258900 Sobic002G258900 Sobic005G220300 Sobic005G220300 Sobic002G258900--Sobic005G220300 Sobic002G178101 Sobic002G178101 Sobic002G258900--Sobic002G178101 Sobic002G178000 Sobic002G178000 Sobic002G258900--Sobic002G178000 Sobic005G060200 Sobic005G060200 Sobic002G258900--Sobic005G060200 Sobic005G066200 Sobic005G066200 Sobic002G258900--Sobic005G066200 Sobic005G066366 Sobic005G066366 Sobic002G258900--Sobic005G066366 Sobic003G443700 Sobic003G443700 Sobic002G258900--Sobic003G443700 Sobic005G216400 Sobic005G216400 Sobic002G258900--Sobic005G216400 Sobic006G121000 Sobic006G121000 Sobic002G258900--Sobic006G121000 Sobic005G162400 Sobic005G162400 Sobic005G220300--Sobic005G162400 Sobic005G220300--Sobic002G178101 Sobic005G220300--Sobic002G178000 Sobic005G220300--Sobic003G443700 Sobic005G220300--Sobic005G216400 Sobic005G220300--Sobic005G060200 Sobic003G357700 Sobic003G357700 Sobic005G220300--Sobic003G357700 Sobic004G346300 Sobic004G346300 Sobic005G220300--Sobic004G346300 Sobic005G220300--Sobic006G121000 Sobic002G178101--Sobic005G220300 Sobic002G178101--Sobic005G216400 Sobic002G178101--Sobic006G121000 Sobic002G178200 Sobic002G178200 Sobic002G178101--Sobic002G178200 Sobic002G178101--Sobic003G443700 Sobic002G178101--Sobic005G060200 Sobic002G178101--Sobic003G357700 Sobic002G178101--Sobic002G178000 Sobic002G178101--Sobic005G162400 Sobic002G178000--Sobic002G178101 Sobic002G178000--Sobic005G220300 Sobic002G178000--Sobic005G216400 Sobic002G178000--Sobic005G162400 Sobic002G178000--Sobic006G121000 Sobic002G178000--Sobic003G443700 Sobic002G178000--Sobic005G060200 Sobic002G178000--Sobic003G357700 Sobic002G178000--Sobic002G178200 Sobic010G268700 Sobic010G268700 Sobic005G060200--Sobic010G268700 Sobic005G060200--Sobic005G216400 Sobic004G002901 Sobic004G002901 Sobic005G060200--Sobic004G002901 Sobic005G060200--Sobic006G121000 Sobic005G197500 Sobic005G197500 Sobic005G060200--Sobic005G197500 Sobic007G212000 Sobic007G212000 Sobic005G060200--Sobic007G212000 Sobic005G060200--Sobic003G443700 Sobic005G060200--Sobic002G178101 Sobic007G015000 Sobic007G015000 Sobic005G060200--Sobic007G015000 Sobic007G119750 Sobic007G119750 Sobic005G066200--Sobic007G119750 Sobic005G197350 Sobic005G197350 Sobic005G066200--Sobic005G197350 Sobic010G126800 Sobic010G126800 Sobic005G066200--Sobic010G126800 Sobic005G066200--Sobic005G066366 Sobic004G008300 Sobic004G008300 Sobic005G066200--Sobic004G008300 Sobic009G004950 Sobic009G004950 Sobic005G066200--Sobic009G004950 Sobic005G066500 Sobic005G066500 Sobic005G066200--Sobic005G066500 Sobic002G019000 Sobic002G019000 Sobic005G066200--Sobic002G019000 Sobic010G242800 Sobic010G242800 Sobic005G066200--Sobic010G242800 Sobic005G066366--Sobic010G242800 Sobic005G110511 Sobic005G110511 Sobic005G066366--Sobic005G110511 Sobic005G066366--Sobic005G197350 Sobic005G197400 Sobic005G197400 Sobic005G066366--Sobic005G197400 Sobic008G033100 Sobic008G033100 Sobic005G066366--Sobic008G033100 Sobic005G066366--Sobic005G197500 Sobic005G182900 Sobic005G182900 Sobic005G066366--Sobic005G182900 Sobic005G066366--Sobic005G066500 Sobic003G161400 Sobic003G161400 Sobic005G066366--Sobic003G161400 Sobic003G443700--Sobic003G357700 Sobic003G443700--Sobic004G346300 Sobic003G443700--Sobic005G216400 Sobic003G443700--Sobic002G178101 Sobic003G443700--Sobic005G060200 Sobic002G025500 Sobic002G025500 Sobic003G443700--Sobic002G025500 Sobic007G177400 Sobic007G177400 Sobic003G443700--Sobic007G177400 Sobic003G443700--Sobic006G121000 Sobic002G028632 Sobic002G028632 Sobic003G443700--Sobic002G028632 Sobic005G216400--Sobic003G357700 Sobic005G216400--Sobic002G178101 Sobic008G105800 Sobic008G105800 Sobic005G216400--Sobic008G105800 Sobic005G216400--Sobic006G121000 Sobic005G216400--Sobic007G212000 Sobic005G216400--Sobic005G060200 Sobic005G216400--Sobic003G443700 Sobic005G216400--Sobic002G178200 Sobic005G216400--Sobic004G346300 Sobic006G121000--Sobic002G178200 Sobic006G121000--Sobic008G105800 Sobic006G121000--Sobic005G216400 Sobic004G299500 Sobic004G299500 Sobic006G121000--Sobic004G299500 Sobic006G121000--Sobic007G015000 Sobic006G121000--Sobic007G212000 Sobic005G069166 Sobic005G069166 Sobic006G121000--Sobic005G069166 Sobic006G121000--Sobic002G178101 Sobic005G069332 Sobic005G069332 Sobic006G121000--Sobic005G069332
Octagon: transcription factors


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