Gene annotation
Transcriptome id Sobic.002G178000.1,Sobic.002G178000.2
Synonym
Functional annotation senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed
UniProt A0A1W0W4S6 , A0A1W0W4Q6
Pfam PF13855 PF07714 PF12819
Panther DB PTHR27003 PTHR27003:SF45
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G29990 : Leucine-rich repeat transmembrane protein kinase protein
RAP-DB (Rice) LOC_Os09g19140.1 : senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a046621 , Zm00025a046625
Brachypodium -
Barley HORVU5Hr1G041660.4 , HORVU5Hr1G041660.5 , HORVU5Hr1G041660.6 , HORVU5Hr1G041660.7 , HORVU5Hr1G041660.1 , HORVU5Hr1G041660.2 , HORVU5Hr1G041660.3 , HORVU5Hr1G041660.8 , HORVU5Hr1G041660.9 , HORVU5Hr1G041660.12 , HORVU5Hr1G041660.10 , HORVU5Hr1G041660.11
Wheat TraesCS5D02G193800 , TraesCS5A02G197200 , TraesCS5A02G197300 , TraesCS6D02G345600 , TraesCS5B02G186400 , TraesCS5D02G193700 , TraesCS1B02G358700 , TraesCS5B02G186300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G178101 - -
2 Sobic.005G220300 OsWAK123 - OsWAK receptor-like protein kinase, expressed -
3 Sobic.005G216400 plant protein of unknown function domain containing protein, expressed -
4 Sobic.005G162400 GATA transcription factor 25, putative, expressed -
5 Sobic.006G121000 purine permease, putative, expressed -
6 Sobic.003G443700 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
7 Sobic.005G060200 cytochrome P450, putative, expressed -
8 Sobic.003G357700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@Laccase LAC7 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
9 Sobic.002G178200 - -
10 Sobic.008G105800 cytochrome P450, putative, expressed -
11 Sobic.004G346300 expressed protein -
12 Sobic.002G258900 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@auxin responsive protein, putative, expressed K14488: SAUR family protein
13 Sobic.007G212000 receptor-like protein kinase precursor, putative, expressed -
14 Sobic.010G245400 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.002G028632 - -
16 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -
17 Sobic.004G002901 - K02940: RP-L9e, large subunit ribosomal protein L9e
18 Sobic.005G069332 - -
19 Sobic.003G161400 powdery mildew resistance protein PM3A, putative, expressed -
20 Sobic.010G268700 expansin precursor, putative, expressed -


Gene co-expression network
sample Sobic002G178000 Sobic002G178000 Sobic002G178101 Sobic002G178101 Sobic002G178000--Sobic002G178101 Sobic005G220300 Sobic005G220300 Sobic002G178000--Sobic005G220300 Sobic005G216400 Sobic005G216400 Sobic002G178000--Sobic005G216400 Sobic005G162400 Sobic005G162400 Sobic002G178000--Sobic005G162400 Sobic006G121000 Sobic006G121000 Sobic002G178000--Sobic006G121000 Sobic003G443700 Sobic003G443700 Sobic002G178000--Sobic003G443700 Sobic005G060200 Sobic005G060200 Sobic002G178000--Sobic005G060200 Sobic003G357700 Sobic003G357700 Sobic002G178000--Sobic003G357700 Sobic002G178200 Sobic002G178200 Sobic002G178000--Sobic002G178200 Sobic002G178101--Sobic005G220300 Sobic002G178101--Sobic005G216400 Sobic002G178101--Sobic006G121000 Sobic002G178101--Sobic002G178200 Sobic002G178101--Sobic003G443700 Sobic002G178101--Sobic005G060200 Sobic002G178101--Sobic003G357700 Sobic002G178101--Sobic002G178000 Sobic002G178101--Sobic005G162400 Sobic005G220300--Sobic005G162400 Sobic005G220300--Sobic002G178101 Sobic005G220300--Sobic002G178000 Sobic005G220300--Sobic003G443700 Sobic005G220300--Sobic005G216400 Sobic005G220300--Sobic005G060200 Sobic005G220300--Sobic003G357700 Sobic004G346300 Sobic004G346300 Sobic005G220300--Sobic004G346300 Sobic005G220300--Sobic006G121000 Sobic005G216400--Sobic003G357700 Sobic005G216400--Sobic002G178101 Sobic008G105800 Sobic008G105800 Sobic005G216400--Sobic008G105800 Sobic005G216400--Sobic006G121000 Sobic007G212000 Sobic007G212000 Sobic005G216400--Sobic007G212000 Sobic005G216400--Sobic005G060200 Sobic005G216400--Sobic003G443700 Sobic005G216400--Sobic002G178200 Sobic005G216400--Sobic004G346300 Sobic005G162400--Sobic005G220300 Sobic005G162400--Sobic002G178101 Sobic005G162400--Sobic003G443700 Sobic007G042600 Sobic007G042600 Sobic005G162400--Sobic007G042600 Sobic006G015300 Sobic006G015300 Sobic005G162400--Sobic006G015300 Sobic005G162400--Sobic004G346300 Sobic005G162400--Sobic002G178000 Sobic007G177400 Sobic007G177400 Sobic005G162400--Sobic007G177400 Sobic005G162400--Sobic005G216400 Sobic006G121000--Sobic002G178200 Sobic006G121000--Sobic008G105800 Sobic006G121000--Sobic005G216400 Sobic004G299500 Sobic004G299500 Sobic006G121000--Sobic004G299500 Sobic007G015000 Sobic007G015000 Sobic006G121000--Sobic007G015000 Sobic006G121000--Sobic007G212000 Sobic005G069166 Sobic005G069166 Sobic006G121000--Sobic005G069166 Sobic006G121000--Sobic002G178101 Sobic005G069332 Sobic005G069332 Sobic006G121000--Sobic005G069332 Sobic003G443700--Sobic003G357700 Sobic003G443700--Sobic004G346300 Sobic003G443700--Sobic005G216400 Sobic003G443700--Sobic002G178101 Sobic003G443700--Sobic005G060200 Sobic002G025500 Sobic002G025500 Sobic003G443700--Sobic002G025500 Sobic003G443700--Sobic007G177400 Sobic003G443700--Sobic006G121000 Sobic002G028632 Sobic002G028632 Sobic003G443700--Sobic002G028632 Sobic010G268700 Sobic010G268700 Sobic005G060200--Sobic010G268700 Sobic005G060200--Sobic005G216400 Sobic004G002901 Sobic004G002901 Sobic005G060200--Sobic004G002901 Sobic005G060200--Sobic006G121000 Sobic005G197500 Sobic005G197500 Sobic005G060200--Sobic005G197500 Sobic005G060200--Sobic007G212000 Sobic005G060200--Sobic003G443700 Sobic005G060200--Sobic002G178101 Sobic005G060200--Sobic007G015000 Sobic003G357700--Sobic005G216400 Sobic003G357700--Sobic003G443700 Sobic003G357700--Sobic004G346300 Sobic003G357700--Sobic007G177400 Sobic005G119900 Sobic005G119900 Sobic003G357700--Sobic005G119900 Sobic002G366200 Sobic002G366200 Sobic003G357700--Sobic002G366200 Sobic003G357700--Sobic007G212000 Sobic003G357700--Sobic002G178101 Sobic003G357700--Sobic008G105800 Sobic002G178200--Sobic006G121000 Sobic002G178200--Sobic005G216400 Sobic002G178200--Sobic002G178101 Sobic002G178200--Sobic007G212000 Sobic006G229901 Sobic006G229901 Sobic002G178200--Sobic006G229901 Sobic007G202480 Sobic007G202480 Sobic002G178200--Sobic007G202480 Sobic002G178200--Sobic008G105800 Sobic002G178200--Sobic004G299500 Sobic002G178200--Sobic005G069166
Octagon: transcription factors


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