Gene annotation
Transcriptome id Sobic.003G083600.1
Synonym Sb03g007040
Functional annotation DNA binding protein, putative, expressed
UniProt C5XQT7
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT1G68390 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os10g08280.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a023583 , Zm00025a023582 , Zm00025a025077 , Zm00025a057513 , Zm00025a026612 , Zm00025a004842 , Zm00025a035572
Brachypodium -
Barley HORVU3Hr1G081930.4 , HORVU3Hr1G081930.5 , HORVU3Hr1G081930.2 , HORVU3Hr1G081930.3 , HORVU3Hr1G081930.1 , HORVU3Hr1G007160.1
Wheat TraesCS3B02G418600 , TraesCS5D02G015600 , TraesCS5A02G010800 , TraesCS3D02G043100 , TraesCS3A02G386500 , TraesCS3D02G043200 , TraesCS5B02G008600 , TraesCS5B02G008600 , TraesCS3D02G042700 , TraesCS3B02G046900 , TraesCS3D02G379500 , TraesCS3A02G037000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G231300 thaumatin, putative, expressed -
2 Sobic.001G514300 Glutathione S-transferase("PubMedID : 26759170,PubMedID : 24597475")@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.009G079900 endoglucanase precursor, putative, expressed -
4 Sobic.008G099100 expressed protein -
5 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
6 Sobic.001G169400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
7 Sobic.003G382200 methyltransferase domain containing protein, expressed -
8 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
9 Sobic.008G014700 domain of unknown function, DUF250 domain containing protein, expressed -
10 Sobic.002G158900 AMP-binding domain containing protein, expressed -
11 Sobic.003G255600 expressed protein -
12 Sobic.010G152500 glycosyltransferase, putative, expressed -
13 Sobic.007G020700 ACT domain containing protein, expressed -
14 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
15 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
16 Sobic.001G314000 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.003G183300 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.001G506600 exostosin family domain containing protein, expressed -
19 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
20 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -


Gene co-expression network
sample Sobic003G083600 Sobic003G083600 Sobic005G231300 Sobic005G231300 Sobic003G083600--Sobic005G231300 Sobic001G514300 Sobic001G514300 Sobic003G083600--Sobic001G514300 Sobic009G079900 Sobic009G079900 Sobic003G083600--Sobic009G079900 Sobic008G099100 Sobic008G099100 Sobic003G083600--Sobic008G099100 Sobic002G029600 Sobic002G029600 Sobic003G083600--Sobic002G029600 Sobic001G169400 Sobic001G169400 Sobic003G083600--Sobic001G169400 Sobic003G382200 Sobic003G382200 Sobic003G083600--Sobic003G382200 Sobic001G274400 Sobic001G274400 Sobic003G083600--Sobic001G274400 Sobic008G014700 Sobic008G014700 Sobic003G083600--Sobic008G014700 Sobic005G231300--Sobic001G514300 Sobic005G231300--Sobic003G083600 Sobic005G231300--Sobic009G079900 Sobic005G231300--Sobic008G099100 Sobic007G208100 Sobic007G208100 Sobic005G231300--Sobic007G208100 Sobic006G030200 Sobic006G030200 Sobic005G231300--Sobic006G030200 Sobic001G314000 Sobic001G314000 Sobic005G231300--Sobic001G314000 Sobic008G077300 Sobic008G077300 Sobic005G231300--Sobic008G077300 Sobic003G151900 Sobic003G151900 Sobic005G231300--Sobic003G151900 Sobic001G514300--Sobic005G231300 Sobic001G514300--Sobic008G099100 Sobic001G514300--Sobic003G083600 Sobic001G514300--Sobic001G314000 Sobic001G514300--Sobic009G079900 Sobic001G514300--Sobic008G077300 Sobic008G135300 Sobic008G135300 Sobic001G514300--Sobic008G135300 Sobic001G514300--Sobic003G151900 Sobic003G269100 Sobic003G269100 Sobic001G514300--Sobic003G269100 Sobic009G060700 Sobic009G060700 Sobic009G079900--Sobic009G060700 Sobic007G020700 Sobic007G020700 Sobic009G079900--Sobic007G020700 Sobic005G052700 Sobic005G052700 Sobic009G079900--Sobic005G052700 Sobic009G079900--Sobic002G029600 Sobic003G079100 Sobic003G079100 Sobic009G079900--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic009G079900--Sobic010G213600 Sobic004G008600 Sobic004G008600 Sobic009G079900--Sobic004G008600 Sobic009G079900--Sobic001G274400 Sobic006G009700 Sobic006G009700 Sobic009G079900--Sobic006G009700 Sobic008G099100--Sobic001G514300 Sobic001G455100 Sobic001G455100 Sobic008G099100--Sobic001G455100 Sobic008G099100--Sobic005G231300 Sobic007G154200 Sobic007G154200 Sobic008G099100--Sobic007G154200 Sobic008G099100--Sobic008G135300 Sobic008G099100--Sobic003G083600 Sobic006G201000 Sobic006G201000 Sobic008G099100--Sobic006G201000 Sobic010G082000 Sobic010G082000 Sobic008G099100--Sobic010G082000 Sobic003G322100 Sobic003G322100 Sobic008G099100--Sobic003G322100 Sobic002G029600--Sobic003G079100 Sobic006G031100 Sobic006G031100 Sobic002G029600--Sobic006G031100 Sobic003G215300 Sobic003G215300 Sobic002G029600--Sobic003G215300 Sobic004G014600 Sobic004G014600 Sobic002G029600--Sobic004G014600 Sobic005G065700 Sobic005G065700 Sobic002G029600--Sobic005G065700 Sobic010G152500 Sobic010G152500 Sobic002G029600--Sobic010G152500 Sobic005G071900 Sobic005G071900 Sobic002G029600--Sobic005G071900 Sobic007G090600 Sobic007G090600 Sobic002G029600--Sobic007G090600 Sobic001G506600 Sobic001G506600 Sobic002G029600--Sobic001G506600 Sobic001G169400--Sobic010G152500 Sobic003G183300 Sobic003G183300 Sobic001G169400--Sobic003G183300 Sobic001G169400--Sobic003G382200 Sobic001G169400--Sobic001G274400 Sobic001G218400 Sobic001G218400 Sobic001G169400--Sobic001G218400 Sobic006G097900 Sobic006G097900 Sobic001G169400--Sobic006G097900 Sobic002G391900 Sobic002G391900 Sobic001G169400--Sobic002G391900 Sobic010G191600 Sobic010G191600 Sobic001G169400--Sobic010G191600 Sobic007G111800 Sobic007G111800 Sobic001G169400--Sobic007G111800 Sobic003G382200--Sobic010G152500 Sobic003G382200--Sobic002G391900 Sobic004G009200 Sobic004G009200 Sobic003G382200--Sobic004G009200 Sobic009G106100 Sobic009G106100 Sobic003G382200--Sobic009G106100 Sobic005G216600 Sobic005G216600 Sobic003G382200--Sobic005G216600 Sobic003G382200--Sobic001G274400 Sobic005G106300 Sobic005G106300 Sobic003G382200--Sobic005G106300 Sobic005G182900 Sobic005G182900 Sobic003G382200--Sobic005G182900 Sobic005G197400 Sobic005G197400 Sobic003G382200--Sobic005G197400 Sobic001G274400--Sobic004G014600 Sobic009G165100 Sobic009G165100 Sobic001G274400--Sobic009G165100 Sobic001G274400--Sobic010G152500 Sobic004G322000 Sobic004G322000 Sobic001G274400--Sobic004G322000 Sobic001G274400--Sobic003G382200 Sobic001G274400--Sobic007G090600 Sobic001G274400--Sobic002G029600 Sobic001G274400--Sobic006G031100 Sobic006G135300 Sobic006G135300 Sobic001G274400--Sobic006G135300 Sobic010G242800 Sobic010G242800 Sobic008G014700--Sobic010G242800 Sobic002G029500 Sobic002G029500 Sobic008G014700--Sobic002G029500 Sobic005G110511 Sobic005G110511 Sobic008G014700--Sobic005G110511 Sobic007G064900 Sobic007G064900 Sobic008G014700--Sobic007G064900 Sobic001G293100 Sobic001G293100 Sobic008G014700--Sobic001G293100 Sobic008G014700--Sobic005G182900 Sobic005G097900 Sobic005G097900 Sobic008G014700--Sobic005G097900 Sobic008G033100 Sobic008G033100 Sobic008G014700--Sobic008G033100 Sobic007G015000 Sobic007G015000 Sobic008G014700--Sobic007G015000
Octagon: transcription factors


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