Gene annotation
Transcriptome id Sobic.009G079900.1
Synonym Sb09g006670, AtGH9C2, GH9C2
Functional annotation endoglucanase precursor, putative, expressed
UniProt C5YUQ8
Pfam PF09478 PF00759
Panther DB PTHR22298 PTHR22298:SF46
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT1G64390 : glycosyl hydrolase 9C2
RAP-DB (Rice) LOC_Os05g12150.1 : endoglucanase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a037591 , Zm00025a035938 , Zm00025a049387 , Zm00025a032681
Brachypodium KQK03329 , KQJ98284 , KQK07034 , KQK02009 , PNT76125 , PNT64837
Barley HORVU6Hr1G077010.1 , HORVU6Hr1G077010.3 , HORVU6Hr1G077010.2 , HORVU6Hr1G077010.5 , HORVU6Hr1G077010.4 , HORVU6Hr1G077010.7 , HORVU6Hr1G077010.8 , HORVU6Hr1G022270.9 , HORVU1Hr1G085830.1 , HORVU1Hr1G085830.2 , HORVU1Hr1G085830.5 , HORVU1Hr1G085830.4 , HORVU1Hr1G085830.7 , HORVU1Hr1G085830.6 , HORVU6Hr1G022270.8 , HORVU6Hr1G077010.21 , HORVU6Hr1G077010.22 , HORVU2Hr1G120100.1 , HORVU2Hr1G120100.2 , HORVU2Hr1G120100.3 , HORVU2Hr1G120100.4 , HORVU5Hr1G060140.5 , HORVU5Hr1G060140.7 , HORVU5Hr1G060140.1 , HORVU5Hr1G060140.8 , HORVU5Hr1G060140.9 , HORVU2Hr1G123870.1 , HORVU2Hr1G123870.3 , HORVU2Hr1G123870.2 , HORVU2Hr1G123870.4 , HORVU7Hr1G040680.5 , HORVU7Hr1G040680.4 , HORVU7Hr1G040680.3 , HORVU7Hr1G040680.2 , HORVU6Hr1G077010.14 , HORVU6Hr1G077010.17 , HORVU6Hr1G077010.16 , HORVU6Hr1G077010.11 , HORVU6Hr1G077010.10 , HORVU6Hr1G077010.13 , HORVU6Hr1G077010.12 , HORVU6Hr1G077010.19 , HORVU6Hr1G077010.18 , HORVU5Hr1G060140.12 , HORVU5Hr1G060140.10 , HORVU5Hr1G060140.11 , HORVU4Hr1G087990.3 , HORVU4Hr1G087990.2 , HORVU4Hr1G087990.5 , HORVU4Hr1G087990.4 , HORVU4Hr1G087990.6 , HORVU1Hr1G085830.3 , HORVU7Hr1G029660.1 , HORVU7Hr1G029660.2 , HORVU7Hr1G029660.3 , HORVU6Hr1G022270.7 , HORVU6Hr1G022270.6 , HORVU6Hr1G022270.5 , HORVU6Hr1G022270.4 , HORVU6Hr1G022270.3 , HORVU6Hr1G022270.2 , HORVU6Hr1G022270.1 , HORVU3Hr1G029470.1 , HORVU3Hr1G029470.3 , HORVU3Hr1G029470.2 , HORVU3Hr1G029470.5 , HORVU3Hr1G029470.4 , HORVU3Hr1G029470.7 , HORVU3Hr1G029470.6 , HORVU3Hr1G029470.9 , HORVU3Hr1G029470.8 , HORVU7Hr1G029680.4 , HORVU7Hr1G029680.2 , HORVU7Hr1G029680.3 , HORVU7Hr1G029680.1 , HORVU0Hr1G023830.4 , HORVU0Hr1G023830.5 , HORVU0Hr1G023830.6 , HORVU0Hr1G023830.1 , HORVU0Hr1G023830.2 , HORVU0Hr1G023830.3 , HORVU7Hr1G040720.1
Wheat TraesCS1D02G397400 , TraesCS5D02G208900 , TraesCS6B02G342600 , TraesCS3D02G153400 , TraesCS6A02G122100 , TraesCS7A02G144500 , TraesCS7D02G146000 , TraesCS6D02G291800 , TraesCS4B02G104500 , TraesCS5B02G201100 , TraesCSU02G093600 , TraesCS6B02G150300 , TraesCS7A02G144700 , TraesCS6D02G112100 , TraesCS7A02G197900 , TraesCS5A02G202600 , TraesCS1A02G389300 , TraesCS7D02G201000 , TraesCS6A02G312400 , TraesCS6A02G312400 , TraesCS7B02G104600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G060700 receptor-like protein kinase 2 precursor, putative, expressed -
2 Sobic.007G020700 ACT domain containing protein, expressed -
3 Sobic.005G052700 ZOS11-01 - C2H2 zinc finger protein, expressed -
4 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
5 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
6 Sobic.010G213600 histidine kinase, putative, expressed -
7 Sobic.004G008600 receptor protein kinase CLAVATA1 precursor, putative, expressed -
8 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
9 Sobic.006G009700 expressed protein -
10 Sobic.005G231300 thaumatin, putative, expressed -
11 Sobic.005G216500 plant protein of unknown function domain containing protein, expressed -
12 Sobic.001G314000 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.003G255600 expressed protein -
14 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
15 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
16 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
17 Sobic.003G083600 DNA binding protein, putative, expressed -
18 Sobic.005G134200 "domain confirmed by Pfam database, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.13 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
19 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
20 Sobic.010G176800 ABC transporter, ATP-binding protein, putative, expressed -


Gene co-expression network
sample Sobic009G079900 Sobic009G079900 Sobic009G060700 Sobic009G060700 Sobic009G079900--Sobic009G060700 Sobic007G020700 Sobic007G020700 Sobic009G079900--Sobic007G020700 Sobic005G052700 Sobic005G052700 Sobic009G079900--Sobic005G052700 Sobic002G029600 Sobic002G029600 Sobic009G079900--Sobic002G029600 Sobic003G079100 Sobic003G079100 Sobic009G079900--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic009G079900--Sobic010G213600 Sobic004G008600 Sobic004G008600 Sobic009G079900--Sobic004G008600 Sobic001G274400 Sobic001G274400 Sobic009G079900--Sobic001G274400 Sobic006G009700 Sobic006G009700 Sobic009G079900--Sobic006G009700 Sobic008G138700 Sobic008G138700 Sobic009G060700--Sobic008G138700 Sobic010G152300 Sobic010G152300 Sobic009G060700--Sobic010G152300 Sobic005G222600 Sobic005G222600 Sobic009G060700--Sobic005G222600 Sobic003G001300 Sobic003G001300 Sobic009G060700--Sobic003G001300 Sobic009G060700--Sobic010G213600 Sobic002G019100 Sobic002G019100 Sobic009G060700--Sobic002G019100 Sobic009G060700--Sobic006G009700 Sobic009G060700--Sobic003G079100 Sobic009G060700--Sobic004G008600 Sobic007G020700--Sobic002G029600 Sobic005G071900 Sobic005G071900 Sobic007G020700--Sobic005G071900 Sobic007G020700--Sobic006G009700 Sobic004G312500 Sobic004G312500 Sobic007G020700--Sobic004G312500 Sobic007G020700--Sobic009G060700 Sobic007G020700--Sobic002G019100 Sobic006G108300 Sobic006G108300 Sobic007G020700--Sobic006G108300 Sobic007G020700--Sobic009G079900 Sobic007G020700--Sobic003G079100 Sobic002G115600 Sobic002G115600 Sobic005G052700--Sobic002G115600 Sobic007G090600 Sobic007G090600 Sobic005G052700--Sobic007G090600 Sobic003G215300 Sobic003G215300 Sobic005G052700--Sobic003G215300 Sobic002G391400 Sobic002G391400 Sobic005G052700--Sobic002G391400 Sobic010G241900 Sobic010G241900 Sobic005G052700--Sobic010G241900 Sobic006G205700 Sobic006G205700 Sobic005G052700--Sobic006G205700 Sobic004G014600 Sobic004G014600 Sobic005G052700--Sobic004G014600 Sobic009G058400 Sobic009G058400 Sobic005G052700--Sobic009G058400 Sobic005G216500 Sobic005G216500 Sobic005G052700--Sobic005G216500 Sobic002G029600--Sobic003G079100 Sobic006G031100 Sobic006G031100 Sobic002G029600--Sobic006G031100 Sobic002G029600--Sobic003G215300 Sobic002G029600--Sobic004G014600 Sobic005G065700 Sobic005G065700 Sobic002G029600--Sobic005G065700 Sobic010G152500 Sobic010G152500 Sobic002G029600--Sobic010G152500 Sobic002G029600--Sobic005G071900 Sobic002G029600--Sobic007G090600 Sobic001G506600 Sobic001G506600 Sobic002G029600--Sobic001G506600 Sobic003G079100--Sobic002G029600 Sobic003G079100--Sobic004G014600 Sobic003G079100--Sobic005G065700 Sobic002G029500 Sobic002G029500 Sobic003G079100--Sobic002G029500 Sobic005G182800 Sobic005G182800 Sobic003G079100--Sobic005G182800 Sobic003G079100--Sobic010G213600 Sobic005G182900 Sobic005G182900 Sobic003G079100--Sobic005G182900 Sobic003G079100--Sobic010G152500 Sobic003G079100--Sobic005G071900 Sobic008G033100 Sobic008G033100 Sobic010G213600--Sobic008G033100 Sobic010G213600--Sobic005G065700 Sobic002G019000 Sobic002G019000 Sobic010G213600--Sobic002G019000 Sobic010G213600--Sobic004G014600 Sobic010G213600--Sobic005G182900 Sobic009G165100 Sobic009G165100 Sobic010G213600--Sobic009G165100 Sobic010G213600--Sobic003G079100 Sobic003G161400 Sobic003G161400 Sobic010G213600--Sobic003G161400 Sobic001G342000 Sobic001G342000 Sobic010G213600--Sobic001G342000 Sobic010G269000 Sobic010G269000 Sobic004G008600--Sobic010G269000 Sobic005G134200 Sobic005G134200 Sobic004G008600--Sobic005G134200 Sobic004G008600--Sobic005G216500 Sobic003G046700 Sobic003G046700 Sobic004G008600--Sobic003G046700 Sobic005G226350 Sobic005G226350 Sobic004G008600--Sobic005G226350 Sobic005G120900 Sobic005G120900 Sobic004G008600--Sobic005G120900 Sobic007G220400 Sobic007G220400 Sobic004G008600--Sobic007G220400 Sobic005G226400 Sobic005G226400 Sobic004G008600--Sobic005G226400 Sobic010G191700 Sobic010G191700 Sobic004G008600--Sobic010G191700 Sobic001G274400--Sobic004G014600 Sobic001G274400--Sobic009G165100 Sobic001G274400--Sobic010G152500 Sobic004G322000 Sobic004G322000 Sobic001G274400--Sobic004G322000 Sobic003G382200 Sobic003G382200 Sobic001G274400--Sobic003G382200 Sobic001G274400--Sobic007G090600 Sobic001G274400--Sobic002G029600 Sobic001G274400--Sobic006G031100 Sobic006G135300 Sobic006G135300 Sobic001G274400--Sobic006G135300 Sobic006G009700--Sobic008G138700 Sobic006G009700--Sobic004G312500 Sobic006G009700--Sobic005G071900 Sobic006G009700--Sobic002G019100 Sobic004G126500 Sobic004G126500 Sobic006G009700--Sobic004G126500 Sobic001G238500 Sobic001G238500 Sobic006G009700--Sobic001G238500 Sobic005G066500 Sobic005G066500 Sobic006G009700--Sobic005G066500 Sobic002G238700 Sobic002G238700 Sobic006G009700--Sobic002G238700 Sobic006G009700--Sobic006G108300
Octagon: transcription factors


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