Gene annotation
Transcriptome id Sobic.005G035000.1
Synonym Sb05g002940, ATAHL1, AHL1
Functional annotation DNA binding protein, putative, expressed
UniProt C5Y4L5
Pfam PF03479
Panther DB PTHR31500 PTHR31500:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12080 : AT-hook motif nuclear-localized protein 1
RAP-DB (Rice) LOC_Os11g05160.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a033461 , Zm00025a013027
Brachypodium KQJ92297
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G373500 BTBN6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
2 Sobic.001G189500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
3 Sobic.004G099600 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA7 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
4 Sobic.003G226100 expressed protein -
5 Sobic.001G349900 cytochrome P450, putative, expressed -
6 Sobic.010G194500 expansin precursor, putative, expressed -
7 Sobic.001G302300 expressed protein -
8 Sobic.003G256900 aspartyl protease family protein, putative, expressed -
9 Sobic.004G176800 chaperone protein dnaJ 10, putative, expressed -
10 Sobic.009G204800 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
11 Sobic.002G275500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
12 Sobic.002G277700 expressed protein -
13 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
14 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
15 Sobic.010G213600 histidine kinase, putative, expressed -
16 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
17 Sobic.004G249700 plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.006G085700 OsPDIL1-2 protein disulfide isomerase PDIL1-2, expressed K09580: PDIA1, protein disulfide-isomerase A1
19 Sobic.010G152500 glycosyltransferase, putative, expressed -
20 Sobic.010G152300 glycosyltransferase, putative, expressed -


Gene co-expression network
sample Sobic005G035000 Sobic005G035000 Sobic001G373500 Sobic001G373500 Sobic005G035000--Sobic001G373500 Sobic001G189500 Sobic001G189500 Sobic005G035000--Sobic001G189500 Sobic004G099600 Sobic004G099600 Sobic005G035000--Sobic004G099600 Sobic003G226100 Sobic003G226100 Sobic005G035000--Sobic003G226100 Sobic001G349900 Sobic001G349900 Sobic005G035000--Sobic001G349900 Sobic010G194500 Sobic010G194500 Sobic005G035000--Sobic010G194500 Sobic001G302300 Sobic001G302300 Sobic005G035000--Sobic001G302300 Sobic003G256900 Sobic003G256900 Sobic005G035000--Sobic003G256900 Sobic004G176800 Sobic004G176800 Sobic005G035000--Sobic004G176800 Sobic001G373500--Sobic005G035000 Sobic006G230100 Sobic006G230100 Sobic001G373500--Sobic006G230100 Sobic007G015000 Sobic007G015000 Sobic001G373500--Sobic007G015000 Sobic001G415100 Sobic001G415100 Sobic001G373500--Sobic001G415100 Sobic006G171100 Sobic006G171100 Sobic001G373500--Sobic006G171100 Sobic002G029500 Sobic002G029500 Sobic001G373500--Sobic002G029500 Sobic002G289500 Sobic002G289500 Sobic001G373500--Sobic002G289500 Sobic004G299500 Sobic004G299500 Sobic001G373500--Sobic004G299500 Sobic001G293100 Sobic001G293100 Sobic001G373500--Sobic001G293100 Sobic001G189500--Sobic001G373500 Sobic002G277700 Sobic002G277700 Sobic001G189500--Sobic002G277700 Sobic001G189500--Sobic005G035000 Sobic001G189500--Sobic001G302300 Sobic001G189500--Sobic003G226100 Sobic004G153700 Sobic004G153700 Sobic001G189500--Sobic004G153700 Sobic009G204800 Sobic009G204800 Sobic001G189500--Sobic009G204800 Sobic003G443200 Sobic003G443200 Sobic001G189500--Sobic003G443200 Sobic001G189500--Sobic010G194500 Sobic004G099600--Sobic005G035000 Sobic004G099600--Sobic001G373500 Sobic010G067900 Sobic010G067900 Sobic004G099600--Sobic010G067900 Sobic002G275500 Sobic002G275500 Sobic004G099600--Sobic002G275500 Sobic001G144200 Sobic001G144200 Sobic004G099600--Sobic001G144200 Sobic010G155800 Sobic010G155800 Sobic004G099600--Sobic010G155800 Sobic006G130400 Sobic006G130400 Sobic004G099600--Sobic006G130400 Sobic004G099600--Sobic004G176800 Sobic004G099600--Sobic001G189500 Sobic003G226100--Sobic004G153700 Sobic003G226100--Sobic009G204800 Sobic003G226100--Sobic010G194500 Sobic010G008000 Sobic010G008000 Sobic003G226100--Sobic010G008000 Sobic003G083700 Sobic003G083700 Sobic003G226100--Sobic003G083700 Sobic003G415500 Sobic003G415500 Sobic003G226100--Sobic003G415500 Sobic003G226100--Sobic005G035000 Sobic007G206700 Sobic007G206700 Sobic003G226100--Sobic007G206700 Sobic003G226100--Sobic001G189500 Sobic001G349900--Sobic001G373500 Sobic002G111900 Sobic002G111900 Sobic001G349900--Sobic002G111900 Sobic010G241900 Sobic010G241900 Sobic001G349900--Sobic010G241900 Sobic001G349900--Sobic005G035000 Sobic007G220400 Sobic007G220400 Sobic001G349900--Sobic007G220400 Sobic002G391400 Sobic002G391400 Sobic001G349900--Sobic002G391400 Sobic005G052700 Sobic005G052700 Sobic001G349900--Sobic005G052700 Sobic009G065700 Sobic009G065700 Sobic001G349900--Sobic009G065700 Sobic002G391300 Sobic002G391300 Sobic001G349900--Sobic002G391300 Sobic001G005000 Sobic001G005000 Sobic010G194500--Sobic001G005000 Sobic010G194500--Sobic004G153700 Sobic006G018900 Sobic006G018900 Sobic010G194500--Sobic006G018900 Sobic010G194500--Sobic003G226100 Sobic010G194500--Sobic009G204800 Sobic009G076800 Sobic009G076800 Sobic010G194500--Sobic009G076800 Sobic010G194500--Sobic010G008000 Sobic010G194500--Sobic007G206700 Sobic004G249700 Sobic004G249700 Sobic010G194500--Sobic004G249700 Sobic007G091900 Sobic007G091900 Sobic001G302300--Sobic007G091900 Sobic001G302300--Sobic001G189500 Sobic001G302300--Sobic001G373500 Sobic005G107500 Sobic005G107500 Sobic001G302300--Sobic005G107500 Sobic004G047600 Sobic004G047600 Sobic001G302300--Sobic004G047600 Sobic002G167600 Sobic002G167600 Sobic001G302300--Sobic002G167600 Sobic001G302300--Sobic005G035000 Sobic009G170500 Sobic009G170500 Sobic001G302300--Sobic009G170500 Sobic001G360700 Sobic001G360700 Sobic001G302300--Sobic001G360700 Sobic004G232600 Sobic004G232600 Sobic003G256900--Sobic004G232600 Sobic003G205600 Sobic003G205600 Sobic003G256900--Sobic003G205600 Sobic003G256900--Sobic005G035000 Sobic007G129000 Sobic007G129000 Sobic003G256900--Sobic007G129000 Sobic003G256900--Sobic004G176800 Sobic003G419400 Sobic003G419400 Sobic003G256900--Sobic003G419400 Sobic003G256900--Sobic004G099600 Sobic001G403200 Sobic001G403200 Sobic003G256900--Sobic001G403200 Sobic010G097200 Sobic010G097200 Sobic003G256900--Sobic010G097200 Sobic003G151900 Sobic003G151900 Sobic004G176800--Sobic003G151900 Sobic006G201000 Sobic006G201000 Sobic004G176800--Sobic006G201000 Sobic003G324600 Sobic003G324600 Sobic004G176800--Sobic003G324600 Sobic008G099100 Sobic008G099100 Sobic004G176800--Sobic008G099100 Sobic006G134001 Sobic006G134001 Sobic004G176800--Sobic006G134001 Sobic004G176800--Sobic005G035000 Sobic004G176800--Sobic003G256900 Sobic004G176800--Sobic004G249700 Sobic004G176800--Sobic004G099600
Octagon: transcription factors


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