Gene annotation
Transcriptome id Sobic.004G099600.2,Sobic.004G099600.1
Synonym Sb04g008120, SbIAA12, auxin/indole-3-acetic acid (Aux/IAA), IAA26, PAP1
Functional annotation "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment" (PubMedID : 20499123)
OsIAA7 - Auxin-responsive Aux/IAA gene family member, expressed
UniProt C5XYI4
Pfam PF02309
Panther DB PTHR31734 PTHR31734:SF31
NCBI CDD -
KEGG Orthology K14484; auxin-responsive protein IAA
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT3G16500 : phytochrome-associated protein 1
RAP-DB (Rice) LOC_Os02g13520.1 : OsIAA7 - Auxin-responsive Aux/IAA gene family member, expressed
MaizeGDB (Corn) Zm00025a020118
Brachypodium KQJ94125 , KQJ94126
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G035000 DNA binding protein, putative, expressed -
2 Sobic.001G373500 BTBN6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
3 Sobic.010G067900 ORC1 - Putative origin recognition complex subunit 1, expressed K02603: origin recognition complex subunit 1
4 Sobic.002G275500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.001G144200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF581 domain containing protein, expressed -
6 Sobic.010G155800 proteins of unknown function domain containing protein, expressed -
7 Sobic.006G130400 TGF-beta receptor, type I/II extracellular region, putative, expressed -
8 Sobic.004G176800 chaperone protein dnaJ 10, putative, expressed -
9 Sobic.001G189500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
10 Sobic.003G256900 aspartyl protease family protein, putative, expressed -
11 Sobic.003G183300 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.004G054000 expressed protein -
13 Sobic.010G179900 transferase family protein, putative, expressed -
14 Sobic.001G349900 cytochrome P450, putative, expressed -
15 Sobic.004G271500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
16 Sobic.001G169400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
17 Sobic.001G284900 expressed protein -
18 Sobic.009G061400 leucine-rich repeat receptor protein kinase EXS precursor, putative, expressed -
19 Sobic.008G147500 cyclin, putative, expressed K18811: cyclin D5, plant
20 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -


Gene co-expression network
sample Sobic004G099600 Sobic004G099600 Sobic005G035000 Sobic005G035000 Sobic004G099600--Sobic005G035000 Sobic001G373500 Sobic001G373500 Sobic004G099600--Sobic001G373500 Sobic010G067900 Sobic010G067900 Sobic004G099600--Sobic010G067900 Sobic002G275500 Sobic002G275500 Sobic004G099600--Sobic002G275500 Sobic001G144200 Sobic001G144200 Sobic004G099600--Sobic001G144200 Sobic010G155800 Sobic010G155800 Sobic004G099600--Sobic010G155800 Sobic006G130400 Sobic006G130400 Sobic004G099600--Sobic006G130400 Sobic004G176800 Sobic004G176800 Sobic004G099600--Sobic004G176800 Sobic001G189500 Sobic001G189500 Sobic004G099600--Sobic001G189500 Sobic005G035000--Sobic001G373500 Sobic005G035000--Sobic001G189500 Sobic005G035000--Sobic004G099600 Sobic003G226100 Sobic003G226100 Sobic005G035000--Sobic003G226100 Sobic001G349900 Sobic001G349900 Sobic005G035000--Sobic001G349900 Sobic010G194500 Sobic010G194500 Sobic005G035000--Sobic010G194500 Sobic001G302300 Sobic001G302300 Sobic005G035000--Sobic001G302300 Sobic003G256900 Sobic003G256900 Sobic005G035000--Sobic003G256900 Sobic005G035000--Sobic004G176800 Sobic001G373500--Sobic005G035000 Sobic006G230100 Sobic006G230100 Sobic001G373500--Sobic006G230100 Sobic007G015000 Sobic007G015000 Sobic001G373500--Sobic007G015000 Sobic001G415100 Sobic001G415100 Sobic001G373500--Sobic001G415100 Sobic006G171100 Sobic006G171100 Sobic001G373500--Sobic006G171100 Sobic002G029500 Sobic002G029500 Sobic001G373500--Sobic002G029500 Sobic002G289500 Sobic002G289500 Sobic001G373500--Sobic002G289500 Sobic004G299500 Sobic004G299500 Sobic001G373500--Sobic004G299500 Sobic001G293100 Sobic001G293100 Sobic001G373500--Sobic001G293100 Sobic002G191000 Sobic002G191000 Sobic010G067900--Sobic002G191000 Sobic008G147500 Sobic008G147500 Sobic010G067900--Sobic008G147500 Sobic010G147700 Sobic010G147700 Sobic010G067900--Sobic010G147700 Sobic001G029800 Sobic001G029800 Sobic010G067900--Sobic001G029800 Sobic003G118100 Sobic003G118100 Sobic010G067900--Sobic003G118100 Sobic006G029300 Sobic006G029300 Sobic010G067900--Sobic006G029300 Sobic009G087000 Sobic009G087000 Sobic010G067900--Sobic009G087000 Sobic004G271500 Sobic004G271500 Sobic010G067900--Sobic004G271500 Sobic010G103700 Sobic010G103700 Sobic010G067900--Sobic010G103700 Sobic001G402400 Sobic001G402400 Sobic002G275500--Sobic001G402400 Sobic003G052100 Sobic003G052100 Sobic002G275500--Sobic003G052100 Sobic009G206500 Sobic009G206500 Sobic002G275500--Sobic009G206500 Sobic002G275500--Sobic001G144200 Sobic003G296500 Sobic003G296500 Sobic002G275500--Sobic003G296500 Sobic002G275500--Sobic004G271500 Sobic003G270400 Sobic003G270400 Sobic002G275500--Sobic003G270400 Sobic010G042600 Sobic010G042600 Sobic002G275500--Sobic010G042600 Sobic007G119500 Sobic007G119500 Sobic002G275500--Sobic007G119500 Sobic001G144200--Sobic009G206500 Sobic001G144200--Sobic010G042600 Sobic010G067800 Sobic010G067800 Sobic001G144200--Sobic010G067800 Sobic005G025900 Sobic005G025900 Sobic001G144200--Sobic005G025900 Sobic001G144200--Sobic002G275500 Sobic001G144200--Sobic002G191000 Sobic001G144200--Sobic004G271500 Sobic007G040301 Sobic007G040301 Sobic001G144200--Sobic007G040301 Sobic001G144200--Sobic003G118100 Sobic009G208700 Sobic009G208700 Sobic010G155800--Sobic009G208700 Sobic002G343100 Sobic002G343100 Sobic010G155800--Sobic002G343100 Sobic003G255600 Sobic003G255600 Sobic010G155800--Sobic003G255600 Sobic003G183300 Sobic003G183300 Sobic010G155800--Sobic003G183300 Sobic001G471800 Sobic001G471800 Sobic010G155800--Sobic001G471800 Sobic003G282300 Sobic003G282300 Sobic010G155800--Sobic003G282300 Sobic004G193500 Sobic004G193500 Sobic010G155800--Sobic004G193500 Sobic006G160900 Sobic006G160900 Sobic010G155800--Sobic006G160900 Sobic002G146000 Sobic002G146000 Sobic010G155800--Sobic002G146000 Sobic010G191600 Sobic010G191600 Sobic006G130400--Sobic010G191600 Sobic006G130400--Sobic003G282300 Sobic003G441800 Sobic003G441800 Sobic006G130400--Sobic003G441800 Sobic005G097400 Sobic005G097400 Sobic006G130400--Sobic005G097400 Sobic003G154500 Sobic003G154500 Sobic006G130400--Sobic003G154500 Sobic005G119900 Sobic005G119900 Sobic006G130400--Sobic005G119900 Sobic007G037600 Sobic007G037600 Sobic006G130400--Sobic007G037600 Sobic001G181600 Sobic001G181600 Sobic006G130400--Sobic001G181600 Sobic006G230200 Sobic006G230200 Sobic006G130400--Sobic006G230200 Sobic003G151900 Sobic003G151900 Sobic004G176800--Sobic003G151900 Sobic006G201000 Sobic006G201000 Sobic004G176800--Sobic006G201000 Sobic003G324600 Sobic003G324600 Sobic004G176800--Sobic003G324600 Sobic008G099100 Sobic008G099100 Sobic004G176800--Sobic008G099100 Sobic006G134001 Sobic006G134001 Sobic004G176800--Sobic006G134001 Sobic004G176800--Sobic005G035000 Sobic004G176800--Sobic003G256900 Sobic004G249700 Sobic004G249700 Sobic004G176800--Sobic004G249700 Sobic004G176800--Sobic004G099600 Sobic001G189500--Sobic001G373500 Sobic002G277700 Sobic002G277700 Sobic001G189500--Sobic002G277700 Sobic001G189500--Sobic005G035000 Sobic001G189500--Sobic001G302300 Sobic001G189500--Sobic003G226100 Sobic004G153700 Sobic004G153700 Sobic001G189500--Sobic004G153700 Sobic009G204800 Sobic009G204800 Sobic001G189500--Sobic009G204800 Sobic003G443200 Sobic003G443200 Sobic001G189500--Sobic003G443200 Sobic001G189500--Sobic010G194500
Octagon: transcription factors


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