Gene annotation
Transcriptome id Sobic.006G130400.1
Synonym Sb06g021020
Functional annotation TGF-beta receptor, type I/II extracellular region, putative, expressed
UniProt A0A1B6PLS8
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF104
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G59740 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g41450.1 : TGF-beta receptor, type I/II extracellular region, putative, expressed
MaizeGDB (Corn) Zm00025a010900
Brachypodium KQJ83348 , KQJ83346 , KQJ83347
Barley HORVU2Hr1G085260.5 , HORVU2Hr1G085260.4 , HORVU2Hr1G085260.3 , HORVU2Hr1G085260.2 , HORVU2Hr1G085260.1 , HORVU2Hr1G085210.8 , HORVU2Hr1G085210.9 , HORVU2Hr1G085210.2 , HORVU2Hr1G085210.3 , HORVU2Hr1G085210.1 , HORVU2Hr1G085210.6 , HORVU2Hr1G085210.7 , HORVU2Hr1G085210.4 , HORVU2Hr1G085210.5 , HORVU2Hr1G085210.18 , HORVU2Hr1G085210.19 , HORVU2Hr1G085210.10 , HORVU2Hr1G085210.11 , HORVU2Hr1G085210.12 , HORVU2Hr1G085210.13 , HORVU2Hr1G085210.14 , HORVU2Hr1G085210.15 , HORVU2Hr1G085210.16 , HORVU2Hr1G085210.17 , HORVU2Hr1G085210.21 , HORVU2Hr1G085210.20 , HORVU2Hr1G085210.22
Wheat TraesCS5D02G067400 , TraesCS5B02G060800 , TraesCS2A02G350100 , TraesCS5A02G056200 , TraesCS2D02G348500 , TraesCS2D02G348500 , TraesCS2D02G348500 , TraesCS2A02G350300 , TraesCS2B02G368600 , TraesCS5B02G060500 , TraesCS2D02G348600 , TraesCS2B02G368600 , TraesCS5D02G067100 , TraesCS5A02G056100 , TraesCS2B02G368700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G191600 cytochrome P450, putative, expressed -
2 Sobic.003G282300 POEI51 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
3 Sobic.003G441800 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
4 Sobic.005G097400 cell death associated protein, putative, expressed -
5 Sobic.003G154500 helix-loop-helix DNA-binding domain containing protein, expressed -
6 Sobic.005G119900 reticuline oxidase-like protein precursor, putative, expressed -
7 Sobic.007G037600 C4-dicarboxylate transporter/malic acid transport protein, expressed -
8 Sobic.001G181600 dehydrogenase/reductase, putative, expressed -
9 Sobic.006G230200 TKL_IRAK_DUF26-ld.1 - DUF26 kinases have homology to DUF26 containing loci, expressed -
10 Sobic.003G441601 - -
11 Sobic.003G095100 glycosyltransferase protein, putative, expressed -
12 Sobic.001G218400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@MATH domain containing protein, expressed -
13 Sobic.006G097900 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
14 Sobic.009G065700 - -
15 Sobic.006G205700 glycosyl hydrolases family 16, putative, expressed -
16 Sobic.001G539200 expressed protein -
17 Sobic.006G085700 OsPDIL1-2 protein disulfide isomerase PDIL1-2, expressed K09580: PDIA1, protein disulfide-isomerase A1
18 Sobic.004G029400 periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
19 Sobic.010G010000 plant protein of unknown function domain containing protein, expressed -
20 Sobic.002G111900 receptor-like kinase, putative, expressed -


Gene co-expression network
sample Sobic006G130400 Sobic006G130400 Sobic010G191600 Sobic010G191600 Sobic006G130400--Sobic010G191600 Sobic003G282300 Sobic003G282300 Sobic006G130400--Sobic003G282300 Sobic003G441800 Sobic003G441800 Sobic006G130400--Sobic003G441800 Sobic005G097400 Sobic005G097400 Sobic006G130400--Sobic005G097400 Sobic003G154500 Sobic003G154500 Sobic006G130400--Sobic003G154500 Sobic005G119900 Sobic005G119900 Sobic006G130400--Sobic005G119900 Sobic007G037600 Sobic007G037600 Sobic006G130400--Sobic007G037600 Sobic001G181600 Sobic001G181600 Sobic006G130400--Sobic001G181600 Sobic006G230200 Sobic006G230200 Sobic006G130400--Sobic006G230200 Sobic005G217766 Sobic005G217766 Sobic010G191600--Sobic005G217766 Sobic010G191600--Sobic005G097400 Sobic002G111900 Sobic002G111900 Sobic010G191600--Sobic002G111900 Sobic002G391400 Sobic002G391400 Sobic010G191600--Sobic002G391400 Sobic006G205700 Sobic006G205700 Sobic010G191600--Sobic006G205700 Sobic001G218400 Sobic001G218400 Sobic010G191600--Sobic001G218400 Sobic010G191700 Sobic010G191700 Sobic010G191600--Sobic010G191700 Sobic010G191600--Sobic003G441800 Sobic007G206800 Sobic007G206800 Sobic010G191600--Sobic007G206800 Sobic007G090600 Sobic007G090600 Sobic003G282300--Sobic007G090600 Sobic006G085700 Sobic006G085700 Sobic003G282300--Sobic006G085700 Sobic003G140200 Sobic003G140200 Sobic003G282300--Sobic003G140200 Sobic004G106100 Sobic004G106100 Sobic003G282300--Sobic004G106100 Sobic008G035800 Sobic008G035800 Sobic003G282300--Sobic008G035800 Sobic003G282300--Sobic006G205700 Sobic006G031100 Sobic006G031100 Sobic003G282300--Sobic006G031100 Sobic003G095100 Sobic003G095100 Sobic003G282300--Sobic003G095100 Sobic004G322000 Sobic004G322000 Sobic003G282300--Sobic004G322000 Sobic003G053200 Sobic003G053200 Sobic003G441800--Sobic003G053200 Sobic003G441700 Sobic003G441700 Sobic003G441800--Sobic003G441700 Sobic003G441601 Sobic003G441601 Sobic003G441800--Sobic003G441601 Sobic005G046400 Sobic005G046400 Sobic003G441800--Sobic005G046400 Sobic003G441800--Sobic006G205700 Sobic004G121600 Sobic004G121600 Sobic003G441800--Sobic004G121600 Sobic003G441800--Sobic005G119900 Sobic003G441800--Sobic007G037600 Sobic009G065700 Sobic009G065700 Sobic003G441800--Sobic009G065700 Sobic005G097400--Sobic010G191600 Sobic002G118801 Sobic002G118801 Sobic005G097400--Sobic002G118801 Sobic005G097400--Sobic006G205700 Sobic001G539200 Sobic001G539200 Sobic005G097400--Sobic001G539200 Sobic005G097400--Sobic004G106100 Sobic001G414800 Sobic001G414800 Sobic005G097400--Sobic001G414800 Sobic005G097400--Sobic002G391400 Sobic003G167300 Sobic003G167300 Sobic005G097400--Sobic003G167300 Sobic007G086300 Sobic007G086300 Sobic005G097400--Sobic007G086300 Sobic003G154500--Sobic001G181600 Sobic003G154500--Sobic005G119900 Sobic001G395900 Sobic001G395900 Sobic003G154500--Sobic001G395900 Sobic003G154500--Sobic006G230200 Sobic007G202480 Sobic007G202480 Sobic003G154500--Sobic007G202480 Sobic009G055300 Sobic009G055300 Sobic003G154500--Sobic009G055300 Sobic006G230100 Sobic006G230100 Sobic003G154500--Sobic006G230100 Sobic003G154500--Sobic001G218400 Sobic004G261500 Sobic004G261500 Sobic003G154500--Sobic004G261500 Sobic005G119900--Sobic003G441700 Sobic001G301000 Sobic001G301000 Sobic005G119900--Sobic001G301000 Sobic005G119900--Sobic001G181600 Sobic005G119900--Sobic004G121600 Sobic005G119900--Sobic003G441800 Sobic005G119900--Sobic003G053200 Sobic005G119900--Sobic003G154500 Sobic005G119900--Sobic009G055300 Sobic001G231800 Sobic001G231800 Sobic005G119900--Sobic001G231800 Sobic007G037600--Sobic003G441800 Sobic003G353200 Sobic003G353200 Sobic007G037600--Sobic003G353200 Sobic010G031700 Sobic010G031700 Sobic007G037600--Sobic010G031700 Sobic002G146000 Sobic002G146000 Sobic007G037600--Sobic002G146000 Sobic007G037600--Sobic003G053200 Sobic004G029400 Sobic004G029400 Sobic007G037600--Sobic004G029400 Sobic007G037600--Sobic001G181600 Sobic007G037600--Sobic001G301000 Sobic007G037600--Sobic006G205700 Sobic001G181600--Sobic003G154500 Sobic001G181600--Sobic005G119900 Sobic001G181600--Sobic003G441700 Sobic006G097900 Sobic006G097900 Sobic001G181600--Sobic006G097900 Sobic001G181600--Sobic001G218400 Sobic001G181600--Sobic009G055300 Sobic007G212000 Sobic007G212000 Sobic001G181600--Sobic007G212000 Sobic001G181600--Sobic007G202480 Sobic007G015000 Sobic007G015000 Sobic001G181600--Sobic007G015000 Sobic006G230200--Sobic009G055300 Sobic006G230200--Sobic001G395900 Sobic006G230200--Sobic006G230100 Sobic006G230200--Sobic007G202480 Sobic004G299500 Sobic004G299500 Sobic006G230200--Sobic004G299500 Sobic005G069332 Sobic005G069332 Sobic006G230200--Sobic005G069332 Sobic008G105800 Sobic008G105800 Sobic006G230200--Sobic008G105800 Sobic001G153100 Sobic001G153100 Sobic006G230200--Sobic001G153100 Sobic005G069166 Sobic005G069166 Sobic006G230200--Sobic005G069166
Octagon: transcription factors


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