Gene annotation
Transcriptome id Sobic.010G067900.1
Synonym ORC1B, Sb10g005910, UNE13, ATORC1B
Functional annotation ORC1 - Putative origin recognition complex subunit 1, expressed
UniProt A0A1W0VRS2
Pfam PF00628 PF01426 PF00004
Panther DB PTHR10763 PTHR10763:SF23
NCBI CDD -
KEGG Orthology K02603; origin recognition complex subunit 1
Gene Ontology GO:0005515; protein binding GO:0003682chromatin binding GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT4G14700 : origin recognition complex 1
RAP-DB (Rice) LOC_Os06g08790.1 : ORC1 - Putative origin recognition complex subunit 1, expressed
MaizeGDB (Corn) Zm00025a042418 , Zm00025a049736
Brachypodium KQK19227
Barley HORVU7Hr1G031190.13 , HORVU7Hr1G031190.12 , HORVU7Hr1G031190.11 , HORVU7Hr1G031190.10 , HORVU7Hr1G031190.17 , HORVU7Hr1G031190.16 , HORVU7Hr1G031190.15 , HORVU7Hr1G031190.14 , HORVU7Hr1G031190.3 , HORVU7Hr1G031190.2 , HORVU7Hr1G031190.1 , HORVU7Hr1G031190.7 , HORVU7Hr1G031190.6 , HORVU7Hr1G031190.5 , HORVU7Hr1G031190.4 , HORVU7Hr1G031190.9 , HORVU7Hr1G031190.8 , HORVU7Hr1G031190.18
Wheat TraesCS7D02G153500 , TraesCS7A02G151700 , TraesCS7B02G055600 , TraesCS7A02G151700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
2 Sobic.008G147500 cyclin, putative, expressed K18811: cyclin D5, plant
3 Sobic.010G147700 WD domain, G-beta repeat domain containing protein, expressed K11274: WDHD1, chromosome transmission fidelity protein 4
4 Sobic.001G029800 expressed protein -
5 Sobic.003G118100 EMB3013, putative, expressed K17545: serine/threonine-protein kinase ULK4
6 Sobic.006G029300 expressed protein K15505: DNA repair protein RAD5
7 Sobic.009G087000 MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed K02542: DNA replication licensing factor MCM6
8 Sobic.004G271500 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@expressed protein -
9 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B
10 Sobic.002G142200 expressed protein -
11 Sobic.006G144700 BRCA1 C Terminus domain containing protein, expressed K10683: BRCA1-associated RING domain protein 1
12 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
13 Sobic.003G294500 dynamin family protein, putative, expressed -
14 Sobic.004G035300 - K10901: BLM, RECQL3, bloom syndrome protein
15 Sobic.004G270800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD repeat-containing protein, putative, expressed K03363: cell division cycle 20, cofactor of APC complex
16 Sobic.001G427400 AAA-type ATPase family protein, putative, expressed K11269: CTF18, chromosome transmission fidelity protein 18
17 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
18 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
19 Sobic.010G067800 integral membrane transporter family protein, putative, expressed -
20 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4


Gene co-expression network
sample Sobic010G067900 Sobic010G067900 Sobic002G191000 Sobic002G191000 Sobic010G067900--Sobic002G191000 Sobic008G147500 Sobic008G147500 Sobic010G067900--Sobic008G147500 Sobic010G147700 Sobic010G147700 Sobic010G067900--Sobic010G147700 Sobic001G029800 Sobic001G029800 Sobic010G067900--Sobic001G029800 Sobic003G118100 Sobic003G118100 Sobic010G067900--Sobic003G118100 Sobic006G029300 Sobic006G029300 Sobic010G067900--Sobic006G029300 Sobic009G087000 Sobic009G087000 Sobic010G067900--Sobic009G087000 Sobic004G271500 Sobic004G271500 Sobic010G067900--Sobic004G271500 Sobic010G103700 Sobic010G103700 Sobic010G067900--Sobic010G103700 Sobic002G191000--Sobic003G118100 Sobic006G035600 Sobic006G035600 Sobic002G191000--Sobic006G035600 Sobic010G051100 Sobic010G051100 Sobic002G191000--Sobic010G051100 Sobic002G191000--Sobic001G029800 Sobic010G008900 Sobic010G008900 Sobic002G191000--Sobic010G008900 Sobic001G070300 Sobic001G070300 Sobic002G191000--Sobic001G070300 Sobic010G274000 Sobic010G274000 Sobic002G191000--Sobic010G274000 Sobic002G191000--Sobic004G271500 Sobic009G181500 Sobic009G181500 Sobic002G191000--Sobic009G181500 Sobic001G427400 Sobic001G427400 Sobic008G147500--Sobic001G427400 Sobic008G147500--Sobic010G067900 Sobic003G414400 Sobic003G414400 Sobic008G147500--Sobic003G414400 Sobic001G284900 Sobic001G284900 Sobic008G147500--Sobic001G284900 Sobic004G237300 Sobic004G237300 Sobic008G147500--Sobic004G237300 Sobic004G198200 Sobic004G198200 Sobic008G147500--Sobic004G198200 Sobic008G147500--Sobic006G029300 Sobic006G112800 Sobic006G112800 Sobic008G147500--Sobic006G112800 Sobic004G271300 Sobic004G271300 Sobic008G147500--Sobic004G271300 Sobic010G147700--Sobic006G029300 Sobic010G147700--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic010G147700--Sobic005G110535 Sobic003G369200 Sobic003G369200 Sobic010G147700--Sobic003G369200 Sobic007G168900 Sobic007G168900 Sobic010G147700--Sobic007G168900 Sobic008G129200 Sobic008G129200 Sobic010G147700--Sobic008G129200 Sobic005G144600 Sobic005G144600 Sobic010G147700--Sobic005G144600 Sobic003G183700 Sobic003G183700 Sobic010G147700--Sobic003G183700 Sobic003G201000 Sobic003G201000 Sobic010G147700--Sobic003G201000 Sobic001G029800--Sobic010G008900 Sobic003G294500 Sobic003G294500 Sobic001G029800--Sobic003G294500 Sobic001G177900 Sobic001G177900 Sobic001G029800--Sobic001G177900 Sobic001G029800--Sobic002G191000 Sobic001G029800--Sobic007G168900 Sobic003G314900 Sobic003G314900 Sobic001G029800--Sobic003G314900 Sobic001G029800--Sobic006G029300 Sobic005G000500 Sobic005G000500 Sobic001G029800--Sobic005G000500 Sobic001G029800--Sobic010G147700 Sobic003G118100--Sobic006G035600 Sobic003G118100--Sobic002G191000 Sobic003G118100--Sobic010G008900 Sobic008G148000 Sobic008G148000 Sobic003G118100--Sobic008G148000 Sobic003G118100--Sobic005G000500 Sobic007G125300 Sobic007G125300 Sobic003G118100--Sobic007G125300 Sobic001G131300 Sobic001G131300 Sobic003G118100--Sobic001G131300 Sobic003G118100--Sobic003G294500 Sobic003G118100--Sobic001G029800 Sobic006G029300--Sobic010G147700 Sobic006G029300--Sobic009G087000 Sobic006G029300--Sobic007G168900 Sobic006G029300--Sobic003G369200 Sobic006G029300--Sobic003G294500 Sobic006G029300--Sobic003G201000 Sobic006G029300--Sobic001G029800 Sobic006G029300--Sobic005G144600 Sobic006G029300--Sobic005G110535 Sobic009G087000--Sobic010G147700 Sobic009G087000--Sobic003G183700 Sobic009G087000--Sobic005G110535 Sobic009G087000--Sobic008G129200 Sobic009G087000--Sobic006G029300 Sobic009G087000--Sobic003G369200 Sobic004G321400 Sobic004G321400 Sobic009G087000--Sobic004G321400 Sobic004G331600 Sobic004G331600 Sobic009G087000--Sobic004G331600 Sobic003G179500 Sobic003G179500 Sobic009G087000--Sobic003G179500 Sobic001G403200 Sobic001G403200 Sobic004G271500--Sobic001G403200 Sobic004G271500--Sobic002G191000 Sobic010G176800 Sobic010G176800 Sobic004G271500--Sobic010G176800 Sobic004G271500--Sobic001G029800 Sobic009G079900 Sobic009G079900 Sobic004G271500--Sobic009G079900 Sobic002G158900 Sobic002G158900 Sobic004G271500--Sobic002G158900 Sobic001G314000 Sobic001G314000 Sobic004G271500--Sobic001G314000 Sobic002G020500 Sobic002G020500 Sobic004G271500--Sobic002G020500 Sobic001G144200 Sobic001G144200 Sobic004G271500--Sobic001G144200 Sobic010G103700--Sobic003G183700 Sobic010G103700--Sobic003G179500 Sobic006G120600 Sobic006G120600 Sobic010G103700--Sobic006G120600 Sobic006G195500 Sobic006G195500 Sobic010G103700--Sobic006G195500 Sobic006G051000 Sobic006G051000 Sobic010G103700--Sobic006G051000 Sobic010G103700--Sobic009G087000 Sobic010G103700--Sobic010G147700 Sobic006G116500 Sobic006G116500 Sobic010G103700--Sobic006G116500 Sobic004G355500 Sobic004G355500 Sobic010G103700--Sobic004G355500
Octagon: transcription factors


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