Gene annotation
Transcriptome id Sobic.004G054000.1
Synonym Sb04g004580
Functional annotation expressed protein
UniProt C5XW25
Pfam -
Panther DB PTHR35549 PTHR35549:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G06880 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os02g07190.1 : expressed protein
MaizeGDB (Corn) Zm00025a019065
Brachypodium KQJ93517
Barley HORVU6Hr1G027780.1 , HORVU6Hr1G027780.2 , HORVU6Hr1G027780.3 , HORVU6Hr1G027780.4 , HORVU6Hr1G027780.5 , HORVU6Hr1G027780.6 , HORVU6Hr1G027780.8 , HORVU6Hr1G027780.9 , HORVU6Hr1G027780.12 , HORVU6Hr1G027780.13 , HORVU6Hr1G027780.10 , HORVU6Hr1G027780.11 , HORVU6Hr1G027780.14
Wheat TraesCS6A02G141800 , TraesCS6D02G131100 , TraesCS6D02G131100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G168100 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
2 Sobic.009G250100 extra-large G-protein-related, putative, expressed -
3 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
4 Sobic.003G324600 transcription factor-related, putative, expressed -
5 Sobic.008G143000 expressed protein -
6 Sobic.006G201000 WRKY37, expressed -
7 Sobic.001G538932 - -
8 Sobic.007G113300 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
9 Sobic.010G155800 proteins of unknown function domain containing protein, expressed -
10 Sobic.006G236700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
11 Sobic.005G222600 RGH1A, putative, expressed K13457: RPM1, disease resistance protein RPM1
12 Sobic.008G077900 exostosin family domain containing protein, expressed -
13 Sobic.001G228200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
14 Sobic.008G062900 H-BTB8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
15 Sobic.004G286700 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.005G022500 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
17 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
18 Sobic.002G034301 - -
19 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
20 Sobic.002G271300 NC domain-containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G054000 Sobic004G054000 Sobic008G168100 Sobic008G168100 Sobic004G054000--Sobic008G168100 Sobic009G250100 Sobic009G250100 Sobic004G054000--Sobic009G250100 Sobic009G059500 Sobic009G059500 Sobic004G054000--Sobic009G059500 Sobic003G324600 Sobic003G324600 Sobic004G054000--Sobic003G324600 Sobic008G143000 Sobic008G143000 Sobic004G054000--Sobic008G143000 Sobic006G201000 Sobic006G201000 Sobic004G054000--Sobic006G201000 Sobic001G538932 Sobic001G538932 Sobic004G054000--Sobic001G538932 Sobic007G113300 Sobic007G113300 Sobic004G054000--Sobic007G113300 Sobic010G155800 Sobic010G155800 Sobic004G054000--Sobic010G155800 Sobic008G168100--Sobic009G059500 Sobic001G228200 Sobic001G228200 Sobic008G168100--Sobic001G228200 Sobic008G168100--Sobic004G054000 Sobic003G294100 Sobic003G294100 Sobic008G168100--Sobic003G294100 Sobic002G271300 Sobic002G271300 Sobic008G168100--Sobic002G271300 Sobic008G168100--Sobic009G250100 Sobic008G126600 Sobic008G126600 Sobic008G168100--Sobic008G126600 Sobic002G094600 Sobic002G094600 Sobic008G168100--Sobic002G094600 Sobic007G152900 Sobic007G152900 Sobic008G168100--Sobic007G152900 Sobic001G163800 Sobic001G163800 Sobic009G250100--Sobic001G163800 Sobic009G250100--Sobic008G168100 Sobic009G250100--Sobic004G054000 Sobic009G250100--Sobic009G059500 Sobic010G131400 Sobic010G131400 Sobic009G250100--Sobic010G131400 Sobic008G062900 Sobic008G062900 Sobic009G250100--Sobic008G062900 Sobic005G022500 Sobic005G022500 Sobic009G250100--Sobic005G022500 Sobic009G250100--Sobic003G294100 Sobic004G038200 Sobic004G038200 Sobic009G250100--Sobic004G038200 Sobic009G059500--Sobic008G168100 Sobic009G059500--Sobic002G271300 Sobic002G186900 Sobic002G186900 Sobic009G059500--Sobic002G186900 Sobic009G059500--Sobic008G126600 Sobic009G059500--Sobic003G294100 Sobic008G141200 Sobic008G141200 Sobic009G059500--Sobic008G141200 Sobic009G059500--Sobic001G228200 Sobic009G059500--Sobic004G054000 Sobic007G044400 Sobic007G044400 Sobic009G059500--Sobic007G044400 Sobic004G112200 Sobic004G112200 Sobic003G324600--Sobic004G112200 Sobic003G419300 Sobic003G419300 Sobic003G324600--Sobic003G419300 Sobic002G239700 Sobic002G239700 Sobic003G324600--Sobic002G239700 Sobic009G058600 Sobic009G058600 Sobic003G324600--Sobic009G058600 Sobic008G035800 Sobic008G035800 Sobic003G324600--Sobic008G035800 Sobic003G324600--Sobic006G201000 Sobic001G232000 Sobic001G232000 Sobic003G324600--Sobic001G232000 Sobic001G307600 Sobic001G307600 Sobic003G324600--Sobic001G307600 Sobic004G214300 Sobic004G214300 Sobic003G324600--Sobic004G214300 Sobic004G156900 Sobic004G156900 Sobic008G143000--Sobic004G156900 Sobic009G021700 Sobic009G021700 Sobic008G143000--Sobic009G021700 Sobic003G003700 Sobic003G003700 Sobic008G143000--Sobic003G003700 Sobic008G143000--Sobic004G054000 Sobic003G420100 Sobic003G420100 Sobic008G143000--Sobic003G420100 Sobic001G522700 Sobic001G522700 Sobic008G143000--Sobic001G522700 Sobic002G357800 Sobic002G357800 Sobic008G143000--Sobic002G357800 Sobic002G280300 Sobic002G280300 Sobic008G143000--Sobic002G280300 Sobic003G151900 Sobic003G151900 Sobic008G143000--Sobic003G151900 Sobic004G271800 Sobic004G271800 Sobic006G201000--Sobic004G271800 Sobic003G183300 Sobic003G183300 Sobic006G201000--Sobic003G183300 Sobic006G201000--Sobic008G035800 Sobic010G082000 Sobic010G082000 Sobic006G201000--Sobic010G082000 Sobic006G092700 Sobic006G092700 Sobic006G201000--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic006G201000--Sobic006G135300 Sobic004G322000 Sobic004G322000 Sobic006G201000--Sobic004G322000 Sobic007G090600 Sobic007G090600 Sobic006G201000--Sobic007G090600 Sobic003G240400 Sobic003G240400 Sobic006G201000--Sobic003G240400 Sobic005G222600 Sobic005G222600 Sobic001G538932--Sobic005G222600 Sobic002G076700 Sobic002G076700 Sobic001G538932--Sobic002G076700 Sobic001G538932--Sobic010G155800 Sobic001G538932--Sobic004G054000 Sobic003G001300 Sobic003G001300 Sobic001G538932--Sobic003G001300 Sobic006G124200 Sobic006G124200 Sobic001G538932--Sobic006G124200 Sobic010G152300 Sobic010G152300 Sobic001G538932--Sobic010G152300 Sobic001G538932--Sobic004G214300 Sobic006G092100 Sobic006G092100 Sobic001G538932--Sobic006G092100 Sobic004G233700 Sobic004G233700 Sobic007G113300--Sobic004G233700 Sobic002G218600 Sobic002G218600 Sobic007G113300--Sobic002G218600 Sobic008G100700 Sobic008G100700 Sobic007G113300--Sobic008G100700 Sobic001G304800 Sobic001G304800 Sobic007G113300--Sobic001G304800 Sobic004G286700 Sobic004G286700 Sobic007G113300--Sobic004G286700 Sobic010G067800 Sobic010G067800 Sobic007G113300--Sobic010G067800 Sobic010G103700 Sobic010G103700 Sobic007G113300--Sobic010G103700 Sobic003G179500 Sobic003G179500 Sobic007G113300--Sobic003G179500 Sobic008G090000 Sobic008G090000 Sobic007G113300--Sobic008G090000 Sobic009G208700 Sobic009G208700 Sobic010G155800--Sobic009G208700 Sobic002G343100 Sobic002G343100 Sobic010G155800--Sobic002G343100 Sobic003G255600 Sobic003G255600 Sobic010G155800--Sobic003G255600 Sobic010G155800--Sobic003G183300 Sobic001G471800 Sobic001G471800 Sobic010G155800--Sobic001G471800 Sobic003G282300 Sobic003G282300 Sobic010G155800--Sobic003G282300 Sobic004G193500 Sobic004G193500 Sobic010G155800--Sobic004G193500 Sobic006G160900 Sobic006G160900 Sobic010G155800--Sobic006G160900 Sobic002G146000 Sobic002G146000 Sobic010G155800--Sobic002G146000
Octagon: transcription factors


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