Gene annotation
Transcriptome id Sobic.005G222600.3,Sobic.005G222600.2
Synonym Sb05g027220, RPS3, RPM1
Functional annotation RGH1A, putative, expressed
UniProt A0A1Z5RJY1
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF484
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g43700.1 : RGH1A, putative, expressed
MaizeGDB (Corn) Zm00025a015734 , Zm00025a041608
Brachypodium KQK08071
Barley HORVU3Hr1G099360.6 , HORVU3Hr1G099360.4 , HORVU3Hr1G099360.5 , HORVU3Hr1G099360.2 , HORVU3Hr1G099360.3 , HORVU3Hr1G099360.1
Wheat TraesCS6D02G005300 , TraesCS5A02G340600 , TraesCS3D02G021900 , TraesCS2B02G039200 , TraesCS6B02G000100 , TraesCS2B02G039100 , TraesCS2B02G038800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G060700 receptor-like protein kinase 2 precursor, putative, expressed -
2 Sobic.003G001300 ZOS1-05 - C2H2 zinc finger protein, expressed -
3 Sobic.008G077900 exostosin family domain containing protein, expressed -
4 Sobic.008G138700 MLA12, putative, expressed -
5 Sobic.005G071700 expressed protein K13457: RPM1, disease resistance protein RPM1
6 Sobic.010G213600 histidine kinase, putative, expressed -
7 Sobic.010G152300 glycosyltransferase, putative, expressed -
8 Sobic.006G092100 no apical meristem protein, putative, expressed -
9 Sobic.009G058400 expressed protein -
10 Sobic.004G322000 hypro1, putative, expressed -
11 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
12 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
13 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
14 Sobic.006G009700 expressed protein -
15 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
16 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
17 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
18 Sobic.002G003400 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.008G138900 MLA12, putative, expressed -
20 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1


Gene co-expression network
sample Sobic005G222600 Sobic005G222600 Sobic009G060700 Sobic009G060700 Sobic005G222600--Sobic009G060700 Sobic003G001300 Sobic003G001300 Sobic005G222600--Sobic003G001300 Sobic008G077900 Sobic008G077900 Sobic005G222600--Sobic008G077900 Sobic008G138700 Sobic008G138700 Sobic005G222600--Sobic008G138700 Sobic005G071700 Sobic005G071700 Sobic005G222600--Sobic005G071700 Sobic010G213600 Sobic010G213600 Sobic005G222600--Sobic010G213600 Sobic010G152300 Sobic010G152300 Sobic005G222600--Sobic010G152300 Sobic006G092100 Sobic006G092100 Sobic005G222600--Sobic006G092100 Sobic009G058400 Sobic009G058400 Sobic005G222600--Sobic009G058400 Sobic009G060700--Sobic008G138700 Sobic009G060700--Sobic010G152300 Sobic009G060700--Sobic005G222600 Sobic009G060700--Sobic003G001300 Sobic009G060700--Sobic010G213600 Sobic002G019100 Sobic002G019100 Sobic009G060700--Sobic002G019100 Sobic006G009700 Sobic006G009700 Sobic009G060700--Sobic006G009700 Sobic003G079100 Sobic003G079100 Sobic009G060700--Sobic003G079100 Sobic004G008600 Sobic004G008600 Sobic009G060700--Sobic004G008600 Sobic003G001300--Sobic008G077900 Sobic003G001300--Sobic009G060700 Sobic003G001300--Sobic005G222600 Sobic010G152500 Sobic010G152500 Sobic003G001300--Sobic010G152500 Sobic003G001300--Sobic008G138700 Sobic003G001300--Sobic006G092100 Sobic007G154100 Sobic007G154100 Sobic003G001300--Sobic007G154100 Sobic004G322000 Sobic004G322000 Sobic003G001300--Sobic004G322000 Sobic003G001300--Sobic010G152300 Sobic008G077900--Sobic003G001300 Sobic008G077900--Sobic005G222600 Sobic003G140200 Sobic003G140200 Sobic008G077900--Sobic003G140200 Sobic008G077900--Sobic004G322000 Sobic002G239700 Sobic002G239700 Sobic008G077900--Sobic002G239700 Sobic008G077900--Sobic009G060700 Sobic006G205500 Sobic006G205500 Sobic008G077900--Sobic006G205500 Sobic007G090600 Sobic007G090600 Sobic008G077900--Sobic007G090600 Sobic008G077900--Sobic005G071700 Sobic008G138700--Sobic006G009700 Sobic008G138700--Sobic009G060700 Sobic005G066500 Sobic005G066500 Sobic008G138700--Sobic005G066500 Sobic005G065700 Sobic005G065700 Sobic008G138700--Sobic005G065700 Sobic005G110511 Sobic005G110511 Sobic008G138700--Sobic005G110511 Sobic005G071900 Sobic005G071900 Sobic008G138700--Sobic005G071900 Sobic004G312500 Sobic004G312500 Sobic008G138700--Sobic004G312500 Sobic008G138700--Sobic006G092100 Sobic008G138700--Sobic010G213600 Sobic005G071700--Sobic005G222600 Sobic005G071700--Sobic008G077900 Sobic005G071700--Sobic009G060700 Sobic005G071700--Sobic003G001300 Sobic005G071700--Sobic008G138700 Sobic005G071700--Sobic003G140200 Sobic005G071700--Sobic002G019100 Sobic005G071700--Sobic002G239700 Sobic001G232000 Sobic001G232000 Sobic005G071700--Sobic001G232000 Sobic008G033100 Sobic008G033100 Sobic010G213600--Sobic008G033100 Sobic010G213600--Sobic005G065700 Sobic002G019000 Sobic002G019000 Sobic010G213600--Sobic002G019000 Sobic004G014600 Sobic004G014600 Sobic010G213600--Sobic004G014600 Sobic005G182900 Sobic005G182900 Sobic010G213600--Sobic005G182900 Sobic009G165100 Sobic009G165100 Sobic010G213600--Sobic009G165100 Sobic010G213600--Sobic003G079100 Sobic003G161400 Sobic003G161400 Sobic010G213600--Sobic003G161400 Sobic001G342000 Sobic001G342000 Sobic010G213600--Sobic001G342000 Sobic010G152300--Sobic009G060700 Sobic010G152300--Sobic006G092100 Sobic005G134200 Sobic005G134200 Sobic010G152300--Sobic005G134200 Sobic010G152300--Sobic010G213600 Sobic002G391300 Sobic002G391300 Sobic010G152300--Sobic002G391300 Sobic002G029500 Sobic002G029500 Sobic010G152300--Sobic002G029500 Sobic002G289500 Sobic002G289500 Sobic010G152300--Sobic002G289500 Sobic010G191700 Sobic010G191700 Sobic010G152300--Sobic010G191700 Sobic003G441601 Sobic003G441601 Sobic010G152300--Sobic003G441601 Sobic006G092100--Sobic010G213600 Sobic006G092100--Sobic010G152300 Sobic001G293100 Sobic001G293100 Sobic006G092100--Sobic001G293100 Sobic006G092100--Sobic008G033100 Sobic006G092100--Sobic008G138700 Sobic005G097900 Sobic005G097900 Sobic006G092100--Sobic005G097900 Sobic006G092100--Sobic005G182900 Sobic006G092100--Sobic002G029500 Sobic006G092100--Sobic002G019000 Sobic005G052700 Sobic005G052700 Sobic009G058400--Sobic005G052700 Sobic009G058400--Sobic007G090600 Sobic009G058400--Sobic009G060700 Sobic009G208700 Sobic009G208700 Sobic009G058400--Sobic009G208700 Sobic009G058400--Sobic004G014600 Sobic009G058400--Sobic005G222600 Sobic007G220400 Sobic007G220400 Sobic009G058400--Sobic007G220400 Sobic002G003400 Sobic002G003400 Sobic009G058400--Sobic002G003400 Sobic002G115600 Sobic002G115600 Sobic009G058400--Sobic002G115600
Octagon: transcription factors


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