Gene annotation
Transcriptome id Sobic.003G001300.1
Synonym MGP, Sb03g000300
Functional annotation ZOS1-05 - C2H2 zinc finger protein, expressed
UniProt C5XJH3
Pfam -
Panther DB PTHR10593 PTHR10593:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003676nucleic acid binding


Orthologs (automatic annotation)
TAIR AT5G44160 : C2H2-like zinc finger protein
RAP-DB (Rice) LOC_Os01g14010.1 : ZOS1-05 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a010195 , Zm00025a005392 , Zm00025a036023 , Zm00025a048513 , Zm00025a047929 , Zm00025a026121 , Zm00025a023015 , Zm00025a056789 , Zm00025a005649 , Zm00025a014537 , Zm00025a015003 , Zm00025a028450 , Zm00025a021475 , Zm00025a014047 , Zm00025a047221 , Zm00025a035820 , Zm00025a006887 , Zm00025a038400 , Zm00025a001203
Brachypodium KQK08378 , KQJ91417 , KQJ91416 , KQK14738 , KQK14739 , KQK14737 , PNT74594 , PNT74593 , PNT74592 , PNT74591 , KQJ96746 , KQJ91415 , KQJ84077 , KQJ84076 , KQK15525 , KQK14747 , KQK14746 , KQK14745 , KQK14744 , KQK14743 , KQK14742 , KQK14741 , KQK14740 , KQK03537 , KQK14749 , KQK14748 , KQK11405 , KQK23107 , KQK03154 , KQK00679
Barley HORVU4Hr1G070950.7 , HORVU4Hr1G070950.6 , HORVU4Hr1G070950.4 , HORVU4Hr1G070950.3 , HORVU4Hr1G070950.2 , HORVU4Hr1G070950.1 , HORVU4Hr1G070950.9 , HORVU4Hr1G070950.8 , HORVU4Hr1G070950.13 , HORVU3Hr1G049810.5 , HORVU3Hr1G049810.4 , HORVU3Hr1G049810.7 , HORVU3Hr1G049810.6 , HORVU3Hr1G049810.3 , HORVU3Hr1G049810.2 , HORVU4Hr1G070950.12 , HORVU4Hr1G070950.11 , HORVU4Hr1G070950.10
Wheat TraesCS2B02G218900 , TraesCS3B02G237700 , TraesCS2B02G421100 , TraesCS5B02G232200 , TraesCS5D02G364900 , TraesCS5D02G364900 , TraesCS2A02G188400 , TraesCS2A02G188400 , TraesCS4B02G262400 , TraesCS3D02G107300 , TraesCS2D02G400300 , TraesCS2D02G400300 , TraesCS2D02G400300 , TraesCS3A02G205800 , TraesCS3B02G497200 , TraesCS3A02G105100 , TraesCS3B02G123600 , TraesCS6B02G271000 , TraesCS6B02G271000 , TraesCS6B02G271000 , TraesCS3D02G171300 , TraesCS5A02G356100 , TraesCS6D02G116300 , TraesCS4A02G041400 , TraesCS2A02G403200 , TraesCS2A02G403200 , TraesCS3D02G449900 , TraesCS3A02G170700 , TraesCS5A02G233700 , TraesCS5D02G240600 , TraesCS6A02G254500 , TraesCS6D02G235800 , TraesCS5B02G358600 , TraesCS3B02G195900 , TraesCS6D02G235800 , TraesCS4D02G262500 , TraesCS3D02G209800 , TraesCS2D02G199300 , TraesCS2D02G199300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G077900 exostosin family domain containing protein, expressed -
2 Sobic.009G060700 receptor-like protein kinase 2 precursor, putative, expressed -
3 Sobic.005G222600 RGH1A, putative, expressed K13457: RPM1, disease resistance protein RPM1
4 Sobic.010G152500 glycosyltransferase, putative, expressed -
5 Sobic.008G138700 MLA12, putative, expressed -
6 Sobic.006G092100 no apical meristem protein, putative, expressed -
7 Sobic.007G154100 aspartic proteinase nepenthesin precursor, putative, expressed -
8 Sobic.004G322000 hypro1, putative, expressed -
9 Sobic.010G152300 glycosyltransferase, putative, expressed -
10 Sobic.003G382200 methyltransferase domain containing protein, expressed -
11 Sobic.003G140200 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
13 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
14 Sobic.005G065700 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
15 Sobic.007G090600 CSLC3 - cellulose synthase-like family C, expressed -
16 Sobic.003G083800 DNA binding protein, putative, expressed -
17 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
18 Sobic.010G213600 histidine kinase, putative, expressed -
19 Sobic.010G096700 leaf senescence related protein, putative, expressed -
20 Sobic.006G108300 expressed protein -


Gene co-expression network
sample Sobic003G001300 Sobic003G001300 Sobic008G077900 Sobic008G077900 Sobic003G001300--Sobic008G077900 Sobic009G060700 Sobic009G060700 Sobic003G001300--Sobic009G060700 Sobic005G222600 Sobic005G222600 Sobic003G001300--Sobic005G222600 Sobic010G152500 Sobic010G152500 Sobic003G001300--Sobic010G152500 Sobic008G138700 Sobic008G138700 Sobic003G001300--Sobic008G138700 Sobic006G092100 Sobic006G092100 Sobic003G001300--Sobic006G092100 Sobic007G154100 Sobic007G154100 Sobic003G001300--Sobic007G154100 Sobic004G322000 Sobic004G322000 Sobic003G001300--Sobic004G322000 Sobic010G152300 Sobic010G152300 Sobic003G001300--Sobic010G152300 Sobic008G077900--Sobic003G001300 Sobic008G077900--Sobic005G222600 Sobic003G140200 Sobic003G140200 Sobic008G077900--Sobic003G140200 Sobic008G077900--Sobic004G322000 Sobic002G239700 Sobic002G239700 Sobic008G077900--Sobic002G239700 Sobic008G077900--Sobic009G060700 Sobic006G205500 Sobic006G205500 Sobic008G077900--Sobic006G205500 Sobic007G090600 Sobic007G090600 Sobic008G077900--Sobic007G090600 Sobic005G071700 Sobic005G071700 Sobic008G077900--Sobic005G071700 Sobic009G060700--Sobic008G138700 Sobic009G060700--Sobic010G152300 Sobic009G060700--Sobic005G222600 Sobic009G060700--Sobic003G001300 Sobic010G213600 Sobic010G213600 Sobic009G060700--Sobic010G213600 Sobic002G019100 Sobic002G019100 Sobic009G060700--Sobic002G019100 Sobic006G009700 Sobic006G009700 Sobic009G060700--Sobic006G009700 Sobic003G079100 Sobic003G079100 Sobic009G060700--Sobic003G079100 Sobic004G008600 Sobic004G008600 Sobic009G060700--Sobic004G008600 Sobic005G222600--Sobic009G060700 Sobic005G222600--Sobic003G001300 Sobic005G222600--Sobic008G077900 Sobic005G222600--Sobic008G138700 Sobic005G222600--Sobic005G071700 Sobic005G222600--Sobic010G213600 Sobic005G222600--Sobic010G152300 Sobic005G222600--Sobic006G092100 Sobic009G058400 Sobic009G058400 Sobic005G222600--Sobic009G058400 Sobic003G382200 Sobic003G382200 Sobic010G152500--Sobic003G382200 Sobic004G009200 Sobic004G009200 Sobic010G152500--Sobic004G009200 Sobic002G391900 Sobic002G391900 Sobic010G152500--Sobic002G391900 Sobic007G015100 Sobic007G015100 Sobic010G152500--Sobic007G015100 Sobic009G106100 Sobic009G106100 Sobic010G152500--Sobic009G106100 Sobic005G106300 Sobic005G106300 Sobic010G152500--Sobic005G106300 Sobic002G029500 Sobic002G029500 Sobic010G152500--Sobic002G029500 Sobic006G097900 Sobic006G097900 Sobic010G152500--Sobic006G097900 Sobic005G182900 Sobic005G182900 Sobic010G152500--Sobic005G182900 Sobic008G138700--Sobic006G009700 Sobic008G138700--Sobic009G060700 Sobic005G066500 Sobic005G066500 Sobic008G138700--Sobic005G066500 Sobic005G065700 Sobic005G065700 Sobic008G138700--Sobic005G065700 Sobic005G110511 Sobic005G110511 Sobic008G138700--Sobic005G110511 Sobic005G071900 Sobic005G071900 Sobic008G138700--Sobic005G071900 Sobic004G312500 Sobic004G312500 Sobic008G138700--Sobic004G312500 Sobic008G138700--Sobic006G092100 Sobic008G138700--Sobic010G213600 Sobic006G092100--Sobic010G213600 Sobic006G092100--Sobic010G152300 Sobic001G293100 Sobic001G293100 Sobic006G092100--Sobic001G293100 Sobic008G033100 Sobic008G033100 Sobic006G092100--Sobic008G033100 Sobic006G092100--Sobic008G138700 Sobic005G097900 Sobic005G097900 Sobic006G092100--Sobic005G097900 Sobic006G092100--Sobic005G182900 Sobic006G092100--Sobic002G029500 Sobic002G019000 Sobic002G019000 Sobic006G092100--Sobic002G019000 Sobic007G154100--Sobic004G312500 Sobic006G209000 Sobic006G209000 Sobic007G154100--Sobic006G209000 Sobic006G108300 Sobic006G108300 Sobic007G154100--Sobic006G108300 Sobic007G154100--Sobic004G009200 Sobic007G154100--Sobic010G152500 Sobic007G154100--Sobic005G071900 Sobic007G154100--Sobic003G079100 Sobic007G154100--Sobic009G106100 Sobic005G182800 Sobic005G182800 Sobic007G154100--Sobic005G182800 Sobic004G322000--Sobic007G090600 Sobic003G215300 Sobic003G215300 Sobic004G322000--Sobic003G215300 Sobic006G031100 Sobic006G031100 Sobic004G322000--Sobic006G031100 Sobic004G322000--Sobic003G140200 Sobic003G282300 Sobic003G282300 Sobic004G322000--Sobic003G282300 Sobic003G240400 Sobic003G240400 Sobic004G322000--Sobic003G240400 Sobic008G035800 Sobic008G035800 Sobic004G322000--Sobic008G035800 Sobic010G082000 Sobic010G082000 Sobic004G322000--Sobic010G082000 Sobic004G014600 Sobic004G014600 Sobic004G322000--Sobic004G014600 Sobic010G152300--Sobic009G060700 Sobic010G152300--Sobic006G092100 Sobic005G134200 Sobic005G134200 Sobic010G152300--Sobic005G134200 Sobic010G152300--Sobic010G213600 Sobic002G391300 Sobic002G391300 Sobic010G152300--Sobic002G391300 Sobic010G152300--Sobic002G029500 Sobic002G289500 Sobic002G289500 Sobic010G152300--Sobic002G289500 Sobic010G191700 Sobic010G191700 Sobic010G152300--Sobic010G191700 Sobic003G441601 Sobic003G441601 Sobic010G152300--Sobic003G441601
Octagon: transcription factors


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