Gene annotation
Transcriptome id Sobic.001G189500.1
Synonym Sb01g016650
Functional annotation FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed
UniProt A0A1Z5S6C6
Pfam PF04030 PF01565
Panther DB PTHR13878 PTHR13878:SF54
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0003885D-arabinono-1,4-lactone oxidase activity GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT2G46760 : D-arabinono-1,4-lactone oxidase family protein
RAP-DB (Rice) LOC_Os03g36530.1 : FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a006249 , Zm00025a017395
Brachypodium PNT66895 , KQK14190
Barley HORVU1Hr1G021070.3 , HORVU1Hr1G021070.2 , HORVU1Hr1G021070.1 , HORVU1Hr1G021070.4 , HORVU3Hr1G109620.1 , HORVU3Hr1G109620.3 , HORVU3Hr1G109620.2 , HORVU6Hr1G014270.2 , HORVU6Hr1G014270.3 , HORVU6Hr1G014270.1
Wheat TraesCS6A02G082500 , TraesCS3B02G556400 , TraesCS3A02G494700 , TraesCS6B02G109800 , TraesCS6D02G075800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G373500 BTBN6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
2 Sobic.002G277700 expressed protein -
3 Sobic.005G035000 DNA binding protein, putative, expressed -
4 Sobic.001G302300 expressed protein -
5 Sobic.003G226100 expressed protein -
6 Sobic.004G153700 expressed protein -
7 Sobic.009G204800 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
8 Sobic.003G443200 xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
9 Sobic.010G194500 expansin precursor, putative, expressed -
10 Sobic.007G091900 ATP binding protein, putative, expressed -
11 Sobic.001G349900 cytochrome P450, putative, expressed -
12 Sobic.005G122800 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase
13 Sobic.001G005000 receptor protein kinase, putative, expressed -
14 Sobic.002G070800 glucosyltransferase, putative, expressed -
15 Sobic.004G099600 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA7 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
16 Sobic.006G009900 expressed protein -
17 Sobic.002G124400 expansin precursor, putative, expressed -
18 Sobic.009G076800 GIL1, putative, expressed -
19 Sobic.004G249700 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.009G106500 PMR5, putative, expressed -


Gene co-expression network
sample Sobic001G189500 Sobic001G189500 Sobic001G373500 Sobic001G373500 Sobic001G189500--Sobic001G373500 Sobic002G277700 Sobic002G277700 Sobic001G189500--Sobic002G277700 Sobic005G035000 Sobic005G035000 Sobic001G189500--Sobic005G035000 Sobic001G302300 Sobic001G302300 Sobic001G189500--Sobic001G302300 Sobic003G226100 Sobic003G226100 Sobic001G189500--Sobic003G226100 Sobic004G153700 Sobic004G153700 Sobic001G189500--Sobic004G153700 Sobic009G204800 Sobic009G204800 Sobic001G189500--Sobic009G204800 Sobic003G443200 Sobic003G443200 Sobic001G189500--Sobic003G443200 Sobic010G194500 Sobic010G194500 Sobic001G189500--Sobic010G194500 Sobic001G373500--Sobic005G035000 Sobic006G230100 Sobic006G230100 Sobic001G373500--Sobic006G230100 Sobic007G015000 Sobic007G015000 Sobic001G373500--Sobic007G015000 Sobic001G415100 Sobic001G415100 Sobic001G373500--Sobic001G415100 Sobic006G171100 Sobic006G171100 Sobic001G373500--Sobic006G171100 Sobic002G029500 Sobic002G029500 Sobic001G373500--Sobic002G029500 Sobic002G289500 Sobic002G289500 Sobic001G373500--Sobic002G289500 Sobic004G299500 Sobic004G299500 Sobic001G373500--Sobic004G299500 Sobic001G293100 Sobic001G293100 Sobic001G373500--Sobic001G293100 Sobic002G277700--Sobic001G189500 Sobic002G277700--Sobic009G204800 Sobic002G277700--Sobic001G373500 Sobic004G246300 Sobic004G246300 Sobic002G277700--Sobic004G246300 Sobic001G005000 Sobic001G005000 Sobic002G277700--Sobic001G005000 Sobic002G277700--Sobic005G035000 Sobic002G277700--Sobic004G153700 Sobic002G277700--Sobic010G194500 Sobic002G277700--Sobic003G226100 Sobic005G035000--Sobic001G373500 Sobic005G035000--Sobic001G189500 Sobic004G099600 Sobic004G099600 Sobic005G035000--Sobic004G099600 Sobic005G035000--Sobic003G226100 Sobic001G349900 Sobic001G349900 Sobic005G035000--Sobic001G349900 Sobic005G035000--Sobic010G194500 Sobic005G035000--Sobic001G302300 Sobic003G256900 Sobic003G256900 Sobic005G035000--Sobic003G256900 Sobic004G176800 Sobic004G176800 Sobic005G035000--Sobic004G176800 Sobic007G091900 Sobic007G091900 Sobic001G302300--Sobic007G091900 Sobic001G302300--Sobic001G189500 Sobic001G302300--Sobic001G373500 Sobic005G107500 Sobic005G107500 Sobic001G302300--Sobic005G107500 Sobic004G047600 Sobic004G047600 Sobic001G302300--Sobic004G047600 Sobic002G167600 Sobic002G167600 Sobic001G302300--Sobic002G167600 Sobic001G302300--Sobic005G035000 Sobic009G170500 Sobic009G170500 Sobic001G302300--Sobic009G170500 Sobic001G360700 Sobic001G360700 Sobic001G302300--Sobic001G360700 Sobic003G226100--Sobic004G153700 Sobic003G226100--Sobic009G204800 Sobic003G226100--Sobic010G194500 Sobic010G008000 Sobic010G008000 Sobic003G226100--Sobic010G008000 Sobic003G083700 Sobic003G083700 Sobic003G226100--Sobic003G083700 Sobic003G415500 Sobic003G415500 Sobic003G226100--Sobic003G415500 Sobic003G226100--Sobic005G035000 Sobic007G206700 Sobic007G206700 Sobic003G226100--Sobic007G206700 Sobic003G226100--Sobic001G189500 Sobic004G153700--Sobic003G226100 Sobic004G153700--Sobic010G008000 Sobic004G153700--Sobic010G194500 Sobic004G153700--Sobic009G204800 Sobic004G153700--Sobic003G083700 Sobic006G018900 Sobic006G018900 Sobic004G153700--Sobic006G018900 Sobic004G153700--Sobic007G206700 Sobic007G092300 Sobic007G092300 Sobic004G153700--Sobic007G092300 Sobic010G259200 Sobic010G259200 Sobic004G153700--Sobic010G259200 Sobic009G204800--Sobic003G226100 Sobic009G204800--Sobic004G153700 Sobic009G204800--Sobic010G194500 Sobic009G204800--Sobic007G206700 Sobic009G204800--Sobic003G083700 Sobic002G001300 Sobic002G001300 Sobic009G204800--Sobic002G001300 Sobic009G204800--Sobic002G277700 Sobic009G204800--Sobic010G008000 Sobic009G204800--Sobic001G005000 Sobic005G122800 Sobic005G122800 Sobic003G443200--Sobic005G122800 Sobic002G050100 Sobic002G050100 Sobic003G443200--Sobic002G050100 Sobic009G253300 Sobic009G253300 Sobic003G443200--Sobic009G253300 Sobic003G239100 Sobic003G239100 Sobic003G443200--Sobic003G239100 Sobic009G033400 Sobic009G033400 Sobic003G443200--Sobic009G033400 Sobic005G145100 Sobic005G145100 Sobic003G443200--Sobic005G145100 Sobic003G082700 Sobic003G082700 Sobic003G443200--Sobic003G082700 Sobic009G008800 Sobic009G008800 Sobic003G443200--Sobic009G008800 Sobic003G443200--Sobic007G091900 Sobic010G194500--Sobic001G005000 Sobic010G194500--Sobic004G153700 Sobic010G194500--Sobic006G018900 Sobic010G194500--Sobic003G226100 Sobic010G194500--Sobic009G204800 Sobic009G076800 Sobic009G076800 Sobic010G194500--Sobic009G076800 Sobic010G194500--Sobic010G008000 Sobic010G194500--Sobic007G206700 Sobic004G249700 Sobic004G249700 Sobic010G194500--Sobic004G249700
Octagon: transcription factors


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