Gene annotation
Transcriptome id Sobic.004G153700.1
Synonym Sb04g020530
Functional annotation expressed protein
UniProt C5XSK1
Pfam PF05553
Panther DB PTHR33450 PTHR33450:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47920 : -
RAP-DB (Rice) LOC_Os02g30240.1 : expressed protein
MaizeGDB (Corn) Zm00025a031378
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G226100 expressed protein -
2 Sobic.010G008000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.010G194500 expansin precursor, putative, expressed -
4 Sobic.009G204800 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
5 Sobic.003G083700 DNA binding protein, putative, expressed -
6 Sobic.006G018900 avr9/Cf-9 rapidly elicited protein 137, putative, expressed -
7 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
8 Sobic.007G092300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
10 Sobic.001G005000 receptor protein kinase, putative, expressed -
11 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
12 Sobic.003G390300 expressed protein -
13 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
14 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase
15 Sobic.009G076800 GIL1, putative, expressed -
16 Sobic.001G402701 - -
17 Sobic.009G187000 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
18 Sobic.003G104900 methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
19 Sobic.008G136900 expressed protein -
20 Sobic.003G415500 RALFL1 - Rapid ALkalinization Factor RALF family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic004G153700 Sobic004G153700 Sobic003G226100 Sobic003G226100 Sobic004G153700--Sobic003G226100 Sobic010G008000 Sobic010G008000 Sobic004G153700--Sobic010G008000 Sobic010G194500 Sobic010G194500 Sobic004G153700--Sobic010G194500 Sobic009G204800 Sobic009G204800 Sobic004G153700--Sobic009G204800 Sobic003G083700 Sobic003G083700 Sobic004G153700--Sobic003G083700 Sobic006G018900 Sobic006G018900 Sobic004G153700--Sobic006G018900 Sobic007G206700 Sobic007G206700 Sobic004G153700--Sobic007G206700 Sobic007G092300 Sobic007G092300 Sobic004G153700--Sobic007G092300 Sobic010G259200 Sobic010G259200 Sobic004G153700--Sobic010G259200 Sobic003G226100--Sobic004G153700 Sobic003G226100--Sobic009G204800 Sobic003G226100--Sobic010G194500 Sobic003G226100--Sobic010G008000 Sobic003G226100--Sobic003G083700 Sobic003G415500 Sobic003G415500 Sobic003G226100--Sobic003G415500 Sobic005G035000 Sobic005G035000 Sobic003G226100--Sobic005G035000 Sobic003G226100--Sobic007G206700 Sobic001G189500 Sobic001G189500 Sobic003G226100--Sobic001G189500 Sobic010G008000--Sobic004G153700 Sobic010G008000--Sobic003G083700 Sobic010G008000--Sobic010G259200 Sobic010G008000--Sobic007G206700 Sobic010G119600 Sobic010G119600 Sobic010G008000--Sobic010G119600 Sobic002G001300 Sobic002G001300 Sobic010G008000--Sobic002G001300 Sobic010G008000--Sobic010G194500 Sobic003G390300 Sobic003G390300 Sobic010G008000--Sobic003G390300 Sobic001G402701 Sobic001G402701 Sobic010G008000--Sobic001G402701 Sobic001G005000 Sobic001G005000 Sobic010G194500--Sobic001G005000 Sobic010G194500--Sobic004G153700 Sobic010G194500--Sobic006G018900 Sobic010G194500--Sobic003G226100 Sobic010G194500--Sobic009G204800 Sobic009G076800 Sobic009G076800 Sobic010G194500--Sobic009G076800 Sobic010G194500--Sobic010G008000 Sobic010G194500--Sobic007G206700 Sobic004G249700 Sobic004G249700 Sobic010G194500--Sobic004G249700 Sobic009G204800--Sobic003G226100 Sobic009G204800--Sobic004G153700 Sobic009G204800--Sobic010G194500 Sobic009G204800--Sobic007G206700 Sobic009G204800--Sobic003G083700 Sobic009G204800--Sobic002G001300 Sobic002G277700 Sobic002G277700 Sobic009G204800--Sobic002G277700 Sobic009G204800--Sobic010G008000 Sobic009G204800--Sobic001G005000 Sobic003G104900 Sobic003G104900 Sobic003G083700--Sobic003G104900 Sobic003G083700--Sobic010G259200 Sobic003G083700--Sobic007G206700 Sobic003G083700--Sobic002G001300 Sobic001G483700 Sobic001G483700 Sobic003G083700--Sobic001G483700 Sobic010G002850 Sobic010G002850 Sobic003G083700--Sobic010G002850 Sobic005G209800 Sobic005G209800 Sobic003G083700--Sobic005G209800 Sobic003G083700--Sobic003G390300 Sobic003G083700--Sobic001G402701 Sobic006G018900--Sobic010G194500 Sobic006G018900--Sobic001G005000 Sobic006G018900--Sobic004G153700 Sobic004G107900 Sobic004G107900 Sobic006G018900--Sobic004G107900 Sobic006G018900--Sobic009G076800 Sobic010G014300 Sobic010G014300 Sobic006G018900--Sobic010G014300 Sobic006G018900--Sobic007G092300 Sobic006G003000 Sobic006G003000 Sobic006G018900--Sobic006G003000 Sobic001G239400 Sobic001G239400 Sobic006G018900--Sobic001G239400 Sobic007G206700--Sobic010G259200 Sobic007G206700--Sobic002G001300 Sobic007G206700--Sobic003G083700 Sobic007G206700--Sobic010G119600 Sobic007G206700--Sobic001G402701 Sobic007G206700--Sobic003G390300 Sobic007G206700--Sobic003G104900 Sobic010G087200 Sobic010G087200 Sobic007G206700--Sobic010G087200 Sobic001G062700 Sobic001G062700 Sobic007G206700--Sobic001G062700 Sobic007G092300--Sobic001G062700 Sobic007G092300--Sobic010G119600 Sobic007G092300--Sobic010G259200 Sobic007G092300--Sobic003G390300 Sobic004G061600 Sobic004G061600 Sobic007G092300--Sobic004G061600 Sobic008G136900 Sobic008G136900 Sobic007G092300--Sobic008G136900 Sobic007G092300--Sobic010G014300 Sobic007G092300--Sobic007G206700 Sobic005G168500 Sobic005G168500 Sobic007G092300--Sobic005G168500 Sobic010G259200--Sobic007G206700 Sobic010G259200--Sobic002G001300 Sobic010G259200--Sobic010G119600 Sobic010G259200--Sobic003G083700 Sobic010G259200--Sobic001G402701 Sobic010G259200--Sobic003G104900 Sobic010G259200--Sobic003G390300 Sobic010G259200--Sobic010G002850 Sobic010G259200--Sobic010G014300
Octagon: transcription factors


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