Gene annotation
Transcriptome id Sobic.006G018900.1
Synonym Sb06g001750
Functional annotation avr9/Cf-9 rapidly elicited protein 137, putative, expressed
UniProt C5YC99
Pfam PF05003 PF11961
Panther DB PTHR31371:SF2 PTHR31371
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G23160 : Protein of unknown function (DUF668)
RAP-DB (Rice) LOC_Os04g08764.1 : avr9/Cf-9 rapidly elicited protein 137, putative, expressed
MaizeGDB (Corn) Zm00025a033739 , Zm00025a012416 , Zm00025a019068 , Zm00025a041352
Brachypodium PNT60493 , PNT60495 , PNT60494 , KQJ81439
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G194500 expansin precursor, putative, expressed -
2 Sobic.001G005000 receptor protein kinase, putative, expressed -
3 Sobic.004G153700 expressed protein -
4 Sobic.004G107900 bZIP transcription factor family protein, putative, expressed -
5 Sobic.009G076800 GIL1, putative, expressed -
6 Sobic.010G014300 expressed protein -
7 Sobic.007G092300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.006G003000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.001G239400 hsp20/alpha crystallin family protein, putative, expressed -
10 Sobic.001G062700 GATA zinc finger domain containing protein, expressed -
11 Sobic.001G462100 MFP1 attachment factor 1, putative, expressed -
12 Sobic.010G008000 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
13 Sobic.007G206700 lectin-like protein kinase, putative, expressed -
14 Sobic.003G226100 expressed protein -
15 Sobic.004G249700 plastocyanin-like domain containing protein, putative, expressed -
16 Sobic.009G204800 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
17 Sobic.010G259200 harpin-induced protein 1 domain containing protein, expressed -
18 Sobic.006G166700 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.010G119600 embryogenesis transmembrane protein, putative, expressed -
20 Sobic.002G001300 laccase precursor protein, putative, expressed K05909: laccase


Gene co-expression network
sample Sobic006G018900 Sobic006G018900 Sobic010G194500 Sobic010G194500 Sobic006G018900--Sobic010G194500 Sobic001G005000 Sobic001G005000 Sobic006G018900--Sobic001G005000 Sobic004G153700 Sobic004G153700 Sobic006G018900--Sobic004G153700 Sobic004G107900 Sobic004G107900 Sobic006G018900--Sobic004G107900 Sobic009G076800 Sobic009G076800 Sobic006G018900--Sobic009G076800 Sobic010G014300 Sobic010G014300 Sobic006G018900--Sobic010G014300 Sobic007G092300 Sobic007G092300 Sobic006G018900--Sobic007G092300 Sobic006G003000 Sobic006G003000 Sobic006G018900--Sobic006G003000 Sobic001G239400 Sobic001G239400 Sobic006G018900--Sobic001G239400 Sobic010G194500--Sobic001G005000 Sobic010G194500--Sobic004G153700 Sobic010G194500--Sobic006G018900 Sobic003G226100 Sobic003G226100 Sobic010G194500--Sobic003G226100 Sobic009G204800 Sobic009G204800 Sobic010G194500--Sobic009G204800 Sobic010G194500--Sobic009G076800 Sobic010G008000 Sobic010G008000 Sobic010G194500--Sobic010G008000 Sobic007G206700 Sobic007G206700 Sobic010G194500--Sobic007G206700 Sobic004G249700 Sobic004G249700 Sobic010G194500--Sobic004G249700 Sobic001G005000--Sobic010G194500 Sobic001G005000--Sobic009G076800 Sobic006G166700 Sobic006G166700 Sobic001G005000--Sobic006G166700 Sobic001G005000--Sobic001G239400 Sobic001G005000--Sobic006G018900 Sobic001G005000--Sobic004G249700 Sobic001G005000--Sobic010G014300 Sobic007G133600 Sobic007G133600 Sobic001G005000--Sobic007G133600 Sobic001G462100 Sobic001G462100 Sobic001G005000--Sobic001G462100 Sobic004G153700--Sobic003G226100 Sobic004G153700--Sobic010G008000 Sobic004G153700--Sobic010G194500 Sobic004G153700--Sobic009G204800 Sobic003G083700 Sobic003G083700 Sobic004G153700--Sobic003G083700 Sobic004G153700--Sobic006G018900 Sobic004G153700--Sobic007G206700 Sobic004G153700--Sobic007G092300 Sobic010G259200 Sobic010G259200 Sobic004G153700--Sobic010G259200 Sobic004G107900--Sobic006G018900 Sobic004G107900--Sobic001G462100 Sobic004G107900--Sobic001G005000 Sobic004G107900--Sobic004G249700 Sobic004G107900--Sobic010G014300 Sobic001G397700 Sobic001G397700 Sobic004G107900--Sobic001G397700 Sobic004G107900--Sobic001G239400 Sobic004G107900--Sobic006G166700 Sobic004G300600 Sobic004G300600 Sobic004G107900--Sobic004G300600 Sobic009G076800--Sobic001G005000 Sobic009G076800--Sobic010G194500 Sobic002G005200 Sobic002G005200 Sobic009G076800--Sobic002G005200 Sobic009G076800--Sobic006G018900 Sobic006G257100 Sobic006G257100 Sobic009G076800--Sobic006G257100 Sobic009G076800--Sobic006G166700 Sobic009G076800--Sobic004G249700 Sobic009G076800--Sobic001G239400 Sobic009G076800--Sobic010G014300 Sobic010G014300--Sobic010G259200 Sobic010G119600 Sobic010G119600 Sobic010G014300--Sobic010G119600 Sobic010G087200 Sobic010G087200 Sobic010G014300--Sobic010G087200 Sobic010G014300--Sobic006G166700 Sobic010G014300--Sobic007G206700 Sobic002G001300 Sobic002G001300 Sobic010G014300--Sobic002G001300 Sobic001G062700 Sobic001G062700 Sobic010G014300--Sobic001G062700 Sobic010G014300--Sobic007G092300 Sobic010G014300--Sobic001G005000 Sobic007G092300--Sobic001G062700 Sobic007G092300--Sobic010G119600 Sobic007G092300--Sobic010G259200 Sobic003G390300 Sobic003G390300 Sobic007G092300--Sobic003G390300 Sobic004G061600 Sobic004G061600 Sobic007G092300--Sobic004G061600 Sobic008G136900 Sobic008G136900 Sobic007G092300--Sobic008G136900 Sobic007G092300--Sobic010G014300 Sobic007G092300--Sobic007G206700 Sobic005G168500 Sobic005G168500 Sobic007G092300--Sobic005G168500 Sobic009G123000 Sobic009G123000 Sobic006G003000--Sobic009G123000 Sobic005G198300 Sobic005G198300 Sobic006G003000--Sobic005G198300 Sobic006G003000--Sobic010G194500 Sobic006G003000--Sobic001G005000 Sobic006G003000--Sobic006G018900 Sobic001G148600 Sobic001G148600 Sobic006G003000--Sobic001G148600 Sobic006G003000--Sobic001G239400 Sobic006G003000--Sobic010G014300 Sobic010G161300 Sobic010G161300 Sobic006G003000--Sobic010G161300 Sobic001G239400--Sobic001G005000 Sobic001G239400--Sobic007G133600 Sobic001G239400--Sobic004G249700 Sobic001G239400--Sobic006G166700 Sobic004G288400 Sobic004G288400 Sobic001G239400--Sobic004G288400 Sobic009G008300 Sobic009G008300 Sobic001G239400--Sobic009G008300 Sobic001G239400--Sobic009G076800 Sobic001G239400--Sobic010G194500 Sobic001G239400--Sobic006G003000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.