Gene annotation
Transcriptome id Sobic.002G277700.1
Synonym Sb02g031070
Functional annotation expressed protein
UniProt C5X6U0
Pfam -
Panther DB PTHR36481 PTHR36481:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g36490.1 : expressed protein
MaizeGDB (Corn) Zm00025a047818
Brachypodium -
Barley HORVU5Hr1G082760.1
Wheat TraesCS5A02G325700
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G189500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
2 Sobic.009G204800 senescence-induced receptor-like serine/threonine-protein kinase precursor, putative, expressed -
3 Sobic.001G373500 BTBN6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
4 Sobic.004G246300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@membrane attack complex component/perforin/complement C9, putative, expressed -
5 Sobic.001G005000 receptor protein kinase, putative, expressed -
6 Sobic.005G035000 DNA binding protein, putative, expressed -
7 Sobic.004G153700 expressed protein -
8 Sobic.010G194500 expansin precursor, putative, expressed -
9 Sobic.003G226100 expressed protein -
10 Sobic.001G349900 cytochrome P450, putative, expressed -
11 Sobic.009G076800 GIL1, putative, expressed -
12 Sobic.001G302300 expressed protein -
13 Sobic.002G032900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
14 Sobic.006G018900 avr9/Cf-9 rapidly elicited protein 137, putative, expressed -
15 Sobic.003G443200 xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
16 Sobic.002G005200 dirigent, putative, expressed -
17 Sobic.002G070800 glucosyltransferase, putative, expressed -
18 Sobic.001G238100 expansin precursor, putative, expressed -
19 Sobic.001G499900 expansin precursor, putative, expressed -
20 Sobic.002G334000 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -


Gene co-expression network
sample Sobic002G277700 Sobic002G277700 Sobic001G189500 Sobic001G189500 Sobic002G277700--Sobic001G189500 Sobic009G204800 Sobic009G204800 Sobic002G277700--Sobic009G204800 Sobic001G373500 Sobic001G373500 Sobic002G277700--Sobic001G373500 Sobic004G246300 Sobic004G246300 Sobic002G277700--Sobic004G246300 Sobic001G005000 Sobic001G005000 Sobic002G277700--Sobic001G005000 Sobic005G035000 Sobic005G035000 Sobic002G277700--Sobic005G035000 Sobic004G153700 Sobic004G153700 Sobic002G277700--Sobic004G153700 Sobic010G194500 Sobic010G194500 Sobic002G277700--Sobic010G194500 Sobic003G226100 Sobic003G226100 Sobic002G277700--Sobic003G226100 Sobic001G189500--Sobic001G373500 Sobic001G189500--Sobic002G277700 Sobic001G189500--Sobic005G035000 Sobic001G302300 Sobic001G302300 Sobic001G189500--Sobic001G302300 Sobic001G189500--Sobic003G226100 Sobic001G189500--Sobic004G153700 Sobic001G189500--Sobic009G204800 Sobic003G443200 Sobic003G443200 Sobic001G189500--Sobic003G443200 Sobic001G189500--Sobic010G194500 Sobic009G204800--Sobic003G226100 Sobic009G204800--Sobic004G153700 Sobic009G204800--Sobic010G194500 Sobic007G206700 Sobic007G206700 Sobic009G204800--Sobic007G206700 Sobic003G083700 Sobic003G083700 Sobic009G204800--Sobic003G083700 Sobic002G001300 Sobic002G001300 Sobic009G204800--Sobic002G001300 Sobic009G204800--Sobic002G277700 Sobic010G008000 Sobic010G008000 Sobic009G204800--Sobic010G008000 Sobic009G204800--Sobic001G005000 Sobic001G373500--Sobic005G035000 Sobic006G230100 Sobic006G230100 Sobic001G373500--Sobic006G230100 Sobic007G015000 Sobic007G015000 Sobic001G373500--Sobic007G015000 Sobic001G415100 Sobic001G415100 Sobic001G373500--Sobic001G415100 Sobic006G171100 Sobic006G171100 Sobic001G373500--Sobic006G171100 Sobic002G029500 Sobic002G029500 Sobic001G373500--Sobic002G029500 Sobic002G289500 Sobic002G289500 Sobic001G373500--Sobic002G289500 Sobic004G299500 Sobic004G299500 Sobic001G373500--Sobic004G299500 Sobic001G293100 Sobic001G293100 Sobic001G373500--Sobic001G293100 Sobic002G379700 Sobic002G379700 Sobic004G246300--Sobic002G379700 Sobic004G246300--Sobic002G277700 Sobic004G246300--Sobic009G204800 Sobic007G133600 Sobic007G133600 Sobic004G246300--Sobic007G133600 Sobic004G246300--Sobic010G194500 Sobic004G246300--Sobic001G005000 Sobic007G015400 Sobic007G015400 Sobic004G246300--Sobic007G015400 Sobic002G032900 Sobic002G032900 Sobic004G246300--Sobic002G032900 Sobic001G239400 Sobic001G239400 Sobic004G246300--Sobic001G239400 Sobic001G005000--Sobic010G194500 Sobic009G076800 Sobic009G076800 Sobic001G005000--Sobic009G076800 Sobic006G166700 Sobic006G166700 Sobic001G005000--Sobic006G166700 Sobic001G005000--Sobic001G239400 Sobic006G018900 Sobic006G018900 Sobic001G005000--Sobic006G018900 Sobic004G249700 Sobic004G249700 Sobic001G005000--Sobic004G249700 Sobic010G014300 Sobic010G014300 Sobic001G005000--Sobic010G014300 Sobic001G005000--Sobic007G133600 Sobic001G462100 Sobic001G462100 Sobic001G005000--Sobic001G462100 Sobic005G035000--Sobic001G373500 Sobic005G035000--Sobic001G189500 Sobic004G099600 Sobic004G099600 Sobic005G035000--Sobic004G099600 Sobic005G035000--Sobic003G226100 Sobic001G349900 Sobic001G349900 Sobic005G035000--Sobic001G349900 Sobic005G035000--Sobic010G194500 Sobic005G035000--Sobic001G302300 Sobic003G256900 Sobic003G256900 Sobic005G035000--Sobic003G256900 Sobic004G176800 Sobic004G176800 Sobic005G035000--Sobic004G176800 Sobic004G153700--Sobic003G226100 Sobic004G153700--Sobic010G008000 Sobic004G153700--Sobic010G194500 Sobic004G153700--Sobic009G204800 Sobic004G153700--Sobic003G083700 Sobic004G153700--Sobic006G018900 Sobic004G153700--Sobic007G206700 Sobic007G092300 Sobic007G092300 Sobic004G153700--Sobic007G092300 Sobic010G259200 Sobic010G259200 Sobic004G153700--Sobic010G259200 Sobic010G194500--Sobic001G005000 Sobic010G194500--Sobic004G153700 Sobic010G194500--Sobic006G018900 Sobic010G194500--Sobic003G226100 Sobic010G194500--Sobic009G204800 Sobic010G194500--Sobic009G076800 Sobic010G194500--Sobic010G008000 Sobic010G194500--Sobic007G206700 Sobic010G194500--Sobic004G249700 Sobic003G226100--Sobic004G153700 Sobic003G226100--Sobic009G204800 Sobic003G226100--Sobic010G194500 Sobic003G226100--Sobic010G008000 Sobic003G226100--Sobic003G083700 Sobic003G415500 Sobic003G415500 Sobic003G226100--Sobic003G415500 Sobic003G226100--Sobic005G035000 Sobic003G226100--Sobic007G206700 Sobic003G226100--Sobic001G189500
Octagon: transcription factors


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