Gene annotation
Transcriptome id Sobic.001G302300.1,Sobic.001G302300.2
Synonym Sb01g029410
Functional annotation expressed protein
UniProt C5WSH0 , C5WZP0
Pfam PF04484
Panther DB PTHR31807 PTHR31807:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G25190 : Family of unknown function (DUF566)
RAP-DB (Rice) LOC_Os10g40620.1 : expressed protein
MaizeGDB (Corn) Zm00025a003346
Brachypodium PNT67862 , PNT67861 , KQJ97757
Barley HORVU1Hr1G054060.9 , HORVU1Hr1G054060.2 , HORVU1Hr1G054060.3 , HORVU1Hr1G054060.4 , HORVU1Hr1G054060.6 , HORVU1Hr1G054060.12 , HORVU1Hr1G054060.13 , HORVU1Hr1G054060.10 , HORVU1Hr1G054060.11
Wheat TraesCS1A02G211300 , TraesCS1D02G214600 , TraesCS1D02G214600 , TraesCS1B02G225200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G091900 ATP binding protein, putative, expressed -
2 Sobic.001G189500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
3 Sobic.001G373500 BTBN6 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
4 Sobic.005G107500 peptide transporter PTR2, putative, expressed -
5 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
6 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
7 Sobic.005G035000 DNA binding protein, putative, expressed -
8 Sobic.009G170500 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
9 Sobic.001G360700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
10 Sobic.003G387500 IQ calmodulin-binding motif domain containing protein, expressed -
11 Sobic.002G254900 membrane protein, putative, expressed -
12 Sobic.006G180300 ethylene-responsive protein related, putative, expressed -
13 Sobic.007G119500 expressed protein -
14 Sobic.002G376100 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
15 Sobic.002G005200 dirigent, putative, expressed -
16 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
17 Sobic.008G014700 domain of unknown function, DUF250 domain containing protein, expressed -
18 Sobic.002G203900 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
19 Sobic.004G193500 expressed protein -
20 Sobic.005G122800 transferase family protein, putative, expressed K15400: omega-hydroxypalmitate O-feruloyl transferase


Gene co-expression network
sample Sobic001G302300 Sobic001G302300 Sobic007G091900 Sobic007G091900 Sobic001G302300--Sobic007G091900 Sobic001G189500 Sobic001G189500 Sobic001G302300--Sobic001G189500 Sobic001G373500 Sobic001G373500 Sobic001G302300--Sobic001G373500 Sobic005G107500 Sobic005G107500 Sobic001G302300--Sobic005G107500 Sobic004G047600 Sobic004G047600 Sobic001G302300--Sobic004G047600 Sobic002G167600 Sobic002G167600 Sobic001G302300--Sobic002G167600 Sobic005G035000 Sobic005G035000 Sobic001G302300--Sobic005G035000 Sobic009G170500 Sobic009G170500 Sobic001G302300--Sobic009G170500 Sobic001G360700 Sobic001G360700 Sobic001G302300--Sobic001G360700 Sobic007G091900--Sobic001G302300 Sobic003G270400 Sobic003G270400 Sobic007G091900--Sobic003G270400 Sobic007G119500 Sobic007G119500 Sobic007G091900--Sobic007G119500 Sobic003G366300 Sobic003G366300 Sobic007G091900--Sobic003G366300 Sobic001G406700 Sobic001G406700 Sobic007G091900--Sobic001G406700 Sobic007G091900--Sobic004G047600 Sobic003G387500 Sobic003G387500 Sobic007G091900--Sobic003G387500 Sobic004G319600 Sobic004G319600 Sobic007G091900--Sobic004G319600 Sobic003G378800 Sobic003G378800 Sobic007G091900--Sobic003G378800 Sobic001G189500--Sobic001G373500 Sobic002G277700 Sobic002G277700 Sobic001G189500--Sobic002G277700 Sobic001G189500--Sobic005G035000 Sobic001G189500--Sobic001G302300 Sobic003G226100 Sobic003G226100 Sobic001G189500--Sobic003G226100 Sobic004G153700 Sobic004G153700 Sobic001G189500--Sobic004G153700 Sobic009G204800 Sobic009G204800 Sobic001G189500--Sobic009G204800 Sobic003G443200 Sobic003G443200 Sobic001G189500--Sobic003G443200 Sobic010G194500 Sobic010G194500 Sobic001G189500--Sobic010G194500 Sobic001G373500--Sobic005G035000 Sobic006G230100 Sobic006G230100 Sobic001G373500--Sobic006G230100 Sobic007G015000 Sobic007G015000 Sobic001G373500--Sobic007G015000 Sobic001G415100 Sobic001G415100 Sobic001G373500--Sobic001G415100 Sobic006G171100 Sobic006G171100 Sobic001G373500--Sobic006G171100 Sobic002G029500 Sobic002G029500 Sobic001G373500--Sobic002G029500 Sobic002G289500 Sobic002G289500 Sobic001G373500--Sobic002G289500 Sobic004G299500 Sobic004G299500 Sobic001G373500--Sobic004G299500 Sobic001G293100 Sobic001G293100 Sobic001G373500--Sobic001G293100 Sobic001G002800 Sobic001G002800 Sobic005G107500--Sobic001G002800 Sobic006G117500 Sobic006G117500 Sobic005G107500--Sobic006G117500 Sobic002G254900 Sobic002G254900 Sobic005G107500--Sobic002G254900 Sobic008G133000 Sobic008G133000 Sobic005G107500--Sobic008G133000 Sobic003G287200 Sobic003G287200 Sobic005G107500--Sobic003G287200 Sobic005G089200 Sobic005G089200 Sobic005G107500--Sobic005G089200 Sobic005G104200 Sobic005G104200 Sobic005G107500--Sobic005G104200 Sobic001G503000 Sobic001G503000 Sobic005G107500--Sobic001G503000 Sobic010G096700 Sobic010G096700 Sobic005G107500--Sobic010G096700 Sobic004G047600--Sobic001G360700 Sobic003G352700 Sobic003G352700 Sobic004G047600--Sobic003G352700 Sobic007G047300 Sobic007G047300 Sobic004G047600--Sobic007G047300 Sobic001G471800 Sobic001G471800 Sobic004G047600--Sobic001G471800 Sobic002G146000 Sobic002G146000 Sobic004G047600--Sobic002G146000 Sobic004G047600--Sobic002G167600 Sobic004G047600--Sobic002G254900 Sobic002G203900 Sobic002G203900 Sobic004G047600--Sobic002G203900 Sobic009G162300 Sobic009G162300 Sobic004G047600--Sobic009G162300 Sobic002G167600--Sobic001G360700 Sobic006G144600 Sobic006G144600 Sobic002G167600--Sobic006G144600 Sobic002G167600--Sobic004G047600 Sobic002G167600--Sobic001G406700 Sobic002G167600--Sobic002G203900 Sobic002G167600--Sobic009G170500 Sobic002G167600--Sobic002G254900 Sobic001G072600 Sobic001G072600 Sobic002G167600--Sobic001G072600 Sobic010G180100 Sobic010G180100 Sobic002G167600--Sobic010G180100 Sobic005G035000--Sobic001G373500 Sobic005G035000--Sobic001G189500 Sobic004G099600 Sobic004G099600 Sobic005G035000--Sobic004G099600 Sobic005G035000--Sobic003G226100 Sobic001G349900 Sobic001G349900 Sobic005G035000--Sobic001G349900 Sobic005G035000--Sobic010G194500 Sobic005G035000--Sobic001G302300 Sobic003G256900 Sobic003G256900 Sobic005G035000--Sobic003G256900 Sobic004G176800 Sobic004G176800 Sobic005G035000--Sobic004G176800 Sobic009G170500--Sobic001G406700 Sobic009G170500--Sobic002G167600 Sobic009G170500--Sobic007G119500 Sobic009G170500--Sobic006G144600 Sobic009G170500--Sobic003G387500 Sobic006G180300 Sobic006G180300 Sobic009G170500--Sobic006G180300 Sobic009G170500--Sobic004G047600 Sobic008G014700 Sobic008G014700 Sobic009G170500--Sobic008G014700 Sobic010G232500 Sobic010G232500 Sobic009G170500--Sobic010G232500 Sobic001G360700--Sobic004G047600 Sobic001G360700--Sobic007G047300 Sobic001G360700--Sobic002G167600 Sobic001G360700--Sobic002G203900 Sobic001G360700--Sobic001G471800 Sobic001G360700--Sobic002G254900 Sobic001G360700--Sobic002G146000 Sobic004G193500 Sobic004G193500 Sobic001G360700--Sobic004G193500 Sobic001G360700--Sobic001G072600
Octagon: transcription factors


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