Gene annotation
Transcriptome id Sobic.009G170500.2,Sobic.009G170500.4,Sobic.009G170500.1,Sobic.009G170500.3
Synonym Sb09g023160, ZIP3
Functional annotation metal cation transporter, putative, expressed
UniProt A0A1Z5R363 , A0A1Z5R305 , C5YZP6
Pfam PF02535
Panther DB PTHR11040 PTHR11040:SF67
NCBI CDD KOG1558; Fe2+/Zn2+ regulated transporter
KEGG Orthology K14709; SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT3G12750 : zinc transporter 5 precursor,zinc transporter 1 precursor
RAP-DB (Rice) LOC_Os05g39560.1 : metal cation transporter, putative, expressed
MaizeGDB (Corn) Zm00025a043952 , Zm00025a029914
Brachypodium KQK05793
Barley HORVU1Hr1G070460.2 , HORVU1Hr1G070460.3 , HORVU1Hr1G070460.1
Wheat TraesCS1D02G293900 , TraesCS1B02G306500 , TraesCS1A02G297500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G406700 expressed protein -
2 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
3 Sobic.007G119500 expressed protein -
4 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
5 Sobic.003G387500 IQ calmodulin-binding motif domain containing protein, expressed -
6 Sobic.006G180300 ethylene-responsive protein related, putative, expressed -
7 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
8 Sobic.008G014700 domain of unknown function, DUF250 domain containing protein, expressed -
9 Sobic.010G232500 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.001G072600 expressed protein -
11 Sobic.001G360700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
12 Sobic.002G254900 membrane protein, putative, expressed -
13 Sobic.008G055700 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.001G402400 expressed protein -
15 Sobic.001G399200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
16 Sobic.002G376100 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
17 Sobic.009G246700 CAS1 domain-containing protein 1 precursor, putative, expressed -
18 Sobic.003G270400 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.005G066366 - -
20 Sobic.005G110511 - -


Gene co-expression network
sample Sobic009G170500 Sobic009G170500 Sobic001G406700 Sobic001G406700 Sobic009G170500--Sobic001G406700 Sobic002G167600 Sobic002G167600 Sobic009G170500--Sobic002G167600 Sobic007G119500 Sobic007G119500 Sobic009G170500--Sobic007G119500 Sobic006G144600 Sobic006G144600 Sobic009G170500--Sobic006G144600 Sobic003G387500 Sobic003G387500 Sobic009G170500--Sobic003G387500 Sobic006G180300 Sobic006G180300 Sobic009G170500--Sobic006G180300 Sobic004G047600 Sobic004G047600 Sobic009G170500--Sobic004G047600 Sobic008G014700 Sobic008G014700 Sobic009G170500--Sobic008G014700 Sobic010G232500 Sobic010G232500 Sobic009G170500--Sobic010G232500 Sobic001G406700--Sobic003G387500 Sobic001G406700--Sobic006G144600 Sobic001G399200 Sobic001G399200 Sobic001G406700--Sobic001G399200 Sobic001G406700--Sobic009G170500 Sobic001G406700--Sobic010G232500 Sobic001G406700--Sobic002G167600 Sobic005G229100 Sobic005G229100 Sobic001G406700--Sobic005G229100 Sobic001G406700--Sobic007G119500 Sobic009G246700 Sobic009G246700 Sobic001G406700--Sobic009G246700 Sobic001G360700 Sobic001G360700 Sobic002G167600--Sobic001G360700 Sobic002G167600--Sobic006G144600 Sobic002G167600--Sobic004G047600 Sobic002G167600--Sobic001G406700 Sobic002G203900 Sobic002G203900 Sobic002G167600--Sobic002G203900 Sobic002G167600--Sobic009G170500 Sobic002G254900 Sobic002G254900 Sobic002G167600--Sobic002G254900 Sobic001G072600 Sobic001G072600 Sobic002G167600--Sobic001G072600 Sobic010G180100 Sobic010G180100 Sobic002G167600--Sobic010G180100 Sobic007G119500--Sobic009G170500 Sobic003G270400 Sobic003G270400 Sobic007G119500--Sobic003G270400 Sobic007G119500--Sobic004G047600 Sobic007G119500--Sobic001G072600 Sobic007G119500--Sobic002G167600 Sobic003G378800 Sobic003G378800 Sobic007G119500--Sobic003G378800 Sobic007G119500--Sobic001G360700 Sobic007G119500--Sobic006G144600 Sobic007G119500--Sobic001G406700 Sobic006G144600--Sobic001G406700 Sobic006G144600--Sobic010G232500 Sobic006G144600--Sobic003G387500 Sobic006G144600--Sobic002G167600 Sobic006G144600--Sobic009G170500 Sobic006G144600--Sobic001G399200 Sobic006G144600--Sobic005G229100 Sobic006G144600--Sobic007G119500 Sobic007G223600 Sobic007G223600 Sobic006G144600--Sobic007G223600 Sobic003G387500--Sobic001G406700 Sobic003G387500--Sobic006G144600 Sobic001G224300 Sobic001G224300 Sobic003G387500--Sobic001G224300 Sobic003G387500--Sobic010G232500 Sobic003G387500--Sobic002G167600 Sobic003G387500--Sobic009G170500 Sobic009G162700 Sobic009G162700 Sobic003G387500--Sobic009G162700 Sobic002G205500 Sobic002G205500 Sobic003G387500--Sobic002G205500 Sobic009G226900 Sobic009G226900 Sobic003G387500--Sobic009G226900 Sobic005G065700 Sobic005G065700 Sobic006G180300--Sobic005G065700 Sobic005G182900 Sobic005G182900 Sobic006G180300--Sobic005G182900 Sobic002G019000 Sobic002G019000 Sobic006G180300--Sobic002G019000 Sobic002G391900 Sobic002G391900 Sobic006G180300--Sobic002G391900 Sobic001G506700 Sobic001G506700 Sobic006G180300--Sobic001G506700 Sobic006G209000 Sobic006G209000 Sobic006G180300--Sobic006G209000 Sobic001G274400 Sobic001G274400 Sobic006G180300--Sobic001G274400 Sobic006G031100 Sobic006G031100 Sobic006G180300--Sobic006G031100 Sobic005G071900 Sobic005G071900 Sobic006G180300--Sobic005G071900 Sobic004G047600--Sobic001G360700 Sobic003G352700 Sobic003G352700 Sobic004G047600--Sobic003G352700 Sobic007G047300 Sobic007G047300 Sobic004G047600--Sobic007G047300 Sobic001G471800 Sobic001G471800 Sobic004G047600--Sobic001G471800 Sobic002G146000 Sobic002G146000 Sobic004G047600--Sobic002G146000 Sobic004G047600--Sobic002G167600 Sobic004G047600--Sobic002G254900 Sobic004G047600--Sobic002G203900 Sobic009G162300 Sobic009G162300 Sobic004G047600--Sobic009G162300 Sobic010G242800 Sobic010G242800 Sobic008G014700--Sobic010G242800 Sobic002G029500 Sobic002G029500 Sobic008G014700--Sobic002G029500 Sobic005G110511 Sobic005G110511 Sobic008G014700--Sobic005G110511 Sobic007G064900 Sobic007G064900 Sobic008G014700--Sobic007G064900 Sobic001G293100 Sobic001G293100 Sobic008G014700--Sobic001G293100 Sobic008G014700--Sobic005G182900 Sobic005G097900 Sobic005G097900 Sobic008G014700--Sobic005G097900 Sobic008G033100 Sobic008G033100 Sobic008G014700--Sobic008G033100 Sobic007G015000 Sobic007G015000 Sobic008G014700--Sobic007G015000 Sobic010G232500--Sobic006G144600 Sobic010G232500--Sobic001G406700 Sobic010G232500--Sobic005G229100 Sobic010G232500--Sobic003G387500 Sobic006G226200 Sobic006G226200 Sobic010G232500--Sobic006G226200 Sobic010G232500--Sobic002G167600 Sobic010G232500--Sobic001G399200 Sobic003G231500 Sobic003G231500 Sobic010G232500--Sobic003G231500 Sobic010G232500--Sobic007G223600
Octagon: transcription factors


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