Gene annotation
Transcriptome id Sobic.002G376100.1
Synonym Sb02g039370, SRF6
Functional annotation STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed
UniProt C5X2E6
Pfam PF00560 PF08263 PF13855 PF00069
Panther DB PTHR27001 PTHR27001:SF198
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G53730 : STRUBBELIG-receptor family 6
RAP-DB (Rice) LOC_Os07g42626.1 : STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a048770 , Zm00025a015224
Brachypodium KQK15155 , KQK15154 , KQK15153
Barley HORVU2Hr1G030690.18 , HORVU2Hr1G030690.19 , HORVU2Hr1G030690.10 , HORVU2Hr1G030690.11 , HORVU2Hr1G030690.12 , HORVU2Hr1G030690.13 , HORVU2Hr1G030690.14 , HORVU2Hr1G030690.16 , HORVU2Hr1G030690.17 , HORVU2Hr1G030690.29 , HORVU2Hr1G030690.24 , HORVU2Hr1G030690.26 , HORVU2Hr1G030690.21 , HORVU2Hr1G030690.20 , HORVU2Hr1G030690.23 , HORVU2Hr1G030690.22 , HORVU2Hr1G030690.32 , HORVU2Hr1G030690.33 , HORVU2Hr1G030690.30 , HORVU2Hr1G030690.31 , HORVU2Hr1G030690.8 , HORVU2Hr1G030690.9 , HORVU2Hr1G030690.2 , HORVU2Hr1G030690.3 , HORVU2Hr1G030690.1 , HORVU2Hr1G030690.6 , HORVU2Hr1G030690.7 , HORVU2Hr1G030690.4 , HORVU2Hr1G030690.5 , HORVU2Hr1G030690.28 , HORVU2Hr1G030690.25
Wheat TraesCS2B02G193000 , TraesCS2A02G166900 , TraesCS2D02G174500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G154100 aspartic proteinase nepenthesin precursor, putative, expressed -
2 Sobic.004G009200 transporter, major facilitator family, putative, expressed K02575: NRT, narK, nrtP, MFS transporter, NNP family, nitrate/nitrite transporter
3 Sobic.002G391900 peroxidase precursor, putative, expressed -
4 Sobic.010G152500 glycosyltransferase, putative, expressed -
5 Sobic.003G382200 methyltransferase domain containing protein, expressed -
6 Sobic.005G066300 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
7 Sobic.009G106100 GCRP9 - Glycine and cysteine rich family protein precursor, expressed -
8 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
9 Sobic.006G108300 expressed protein -
10 Sobic.004G193500 expressed protein -
11 Sobic.007G015100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.004G312500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@nitrate reductase, putative, expressed K10534: nitrate reductase (NAD(P)H)
13 Sobic.005G066366 - -
14 Sobic.005G197400 NBS-LRR disease resistance protein, putative, expressed -
15 Sobic.006G224500 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
17 Sobic.003G255600 expressed protein -
18 Sobic.002G411000 AP2 domain containing protein, expressed -
19 Sobic.005G079400 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
20 Sobic.003G083800 DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic002G376100 Sobic002G376100 Sobic007G154100 Sobic007G154100 Sobic002G376100--Sobic007G154100 Sobic004G009200 Sobic004G009200 Sobic002G376100--Sobic004G009200 Sobic002G391900 Sobic002G391900 Sobic002G376100--Sobic002G391900 Sobic010G152500 Sobic010G152500 Sobic002G376100--Sobic010G152500 Sobic003G382200 Sobic003G382200 Sobic002G376100--Sobic003G382200 Sobic005G066300 Sobic005G066300 Sobic002G376100--Sobic005G066300 Sobic009G106100 Sobic009G106100 Sobic002G376100--Sobic009G106100 Sobic005G071900 Sobic005G071900 Sobic002G376100--Sobic005G071900 Sobic006G108300 Sobic006G108300 Sobic002G376100--Sobic006G108300 Sobic004G312500 Sobic004G312500 Sobic007G154100--Sobic004G312500 Sobic006G209000 Sobic006G209000 Sobic007G154100--Sobic006G209000 Sobic007G154100--Sobic006G108300 Sobic007G154100--Sobic004G009200 Sobic007G154100--Sobic010G152500 Sobic007G154100--Sobic005G071900 Sobic003G079100 Sobic003G079100 Sobic007G154100--Sobic003G079100 Sobic007G154100--Sobic009G106100 Sobic005G182800 Sobic005G182800 Sobic007G154100--Sobic005G182800 Sobic005G197400 Sobic005G197400 Sobic004G009200--Sobic005G197400 Sobic004G009200--Sobic010G152500 Sobic005G197500 Sobic005G197500 Sobic004G009200--Sobic005G197500 Sobic004G009200--Sobic003G382200 Sobic004G009200--Sobic009G106100 Sobic005G106300 Sobic005G106300 Sobic004G009200--Sobic005G106300 Sobic004G009200--Sobic007G154100 Sobic004G009200--Sobic005G182800 Sobic007G015100 Sobic007G015100 Sobic004G009200--Sobic007G015100 Sobic002G391900--Sobic003G382200 Sobic002G391900--Sobic010G152500 Sobic002G391900--Sobic004G009200 Sobic002G391900--Sobic009G106100 Sobic005G069500 Sobic005G069500 Sobic002G391900--Sobic005G069500 Sobic006G097900 Sobic006G097900 Sobic002G391900--Sobic006G097900 Sobic005G216600 Sobic005G216600 Sobic002G391900--Sobic005G216600 Sobic006G031100 Sobic006G031100 Sobic002G391900--Sobic006G031100 Sobic006G224500 Sobic006G224500 Sobic002G391900--Sobic006G224500 Sobic010G152500--Sobic003G382200 Sobic010G152500--Sobic004G009200 Sobic010G152500--Sobic002G391900 Sobic010G152500--Sobic007G015100 Sobic010G152500--Sobic009G106100 Sobic010G152500--Sobic005G106300 Sobic002G029500 Sobic002G029500 Sobic010G152500--Sobic002G029500 Sobic010G152500--Sobic006G097900 Sobic005G182900 Sobic005G182900 Sobic010G152500--Sobic005G182900 Sobic003G382200--Sobic010G152500 Sobic003G382200--Sobic002G391900 Sobic003G382200--Sobic004G009200 Sobic003G382200--Sobic009G106100 Sobic003G382200--Sobic005G216600 Sobic001G274400 Sobic001G274400 Sobic003G382200--Sobic001G274400 Sobic003G382200--Sobic005G106300 Sobic003G382200--Sobic005G182900 Sobic003G382200--Sobic005G197400 Sobic002G411000 Sobic002G411000 Sobic005G066300--Sobic002G411000 Sobic005G066300--Sobic004G312500 Sobic001G506700 Sobic001G506700 Sobic005G066300--Sobic001G506700 Sobic005G066300--Sobic005G071900 Sobic010G096700 Sobic010G096700 Sobic005G066300--Sobic010G096700 Sobic005G197350 Sobic005G197350 Sobic005G066300--Sobic005G197350 Sobic005G066300--Sobic006G209000 Sobic002G081850 Sobic002G081850 Sobic005G066300--Sobic002G081850 Sobic005G066500 Sobic005G066500 Sobic005G066300--Sobic005G066500 Sobic003G083800 Sobic003G083800 Sobic009G106100--Sobic003G083800 Sobic009G106100--Sobic010G152500 Sobic009G106100--Sobic004G009200 Sobic009G106100--Sobic003G382200 Sobic009G106100--Sobic005G106300 Sobic007G111800 Sobic007G111800 Sobic009G106100--Sobic007G111800 Sobic009G106100--Sobic002G391900 Sobic009G106100--Sobic005G216600 Sobic009G106100--Sobic005G197400 Sobic005G065700 Sobic005G065700 Sobic005G071900--Sobic005G065700 Sobic005G071900--Sobic004G312500 Sobic005G071900--Sobic005G066500 Sobic005G110511 Sobic005G110511 Sobic005G071900--Sobic005G110511 Sobic005G071900--Sobic006G108300 Sobic006G009700 Sobic006G009700 Sobic005G071900--Sobic006G009700 Sobic008G138700 Sobic008G138700 Sobic005G071900--Sobic008G138700 Sobic005G071900--Sobic003G079100 Sobic002G029600 Sobic002G029600 Sobic005G071900--Sobic002G029600 Sobic006G108300--Sobic004G312500 Sobic006G108300--Sobic005G071900 Sobic006G108300--Sobic007G154100 Sobic006G108300--Sobic002G411000 Sobic006G108300--Sobic006G009700 Sobic006G108300--Sobic003G079100 Sobic006G108300--Sobic006G209000 Sobic006G108300--Sobic002G029600 Sobic002G019100 Sobic002G019100 Sobic006G108300--Sobic002G019100
Octagon: transcription factors


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