Gene annotation
Transcriptome id Sobic.005G107500.2,Sobic.005G107500.1,Sobic.005G107500.3
Synonym Sb05g010070, NRT1:2, ATNRT1:2, NTL1
Functional annotation peptide transporter PTR2, putative, expressed
UniProt A0A1B6PRK3 , A0A1B6PRM3 , A0A1Z5RI87
Pfam PF00854
Panther DB PTHR11654 PTHR11654:SF140
NCBI CDD KOG1237; H+/oligopeptide symporter
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT1G27040 : nitrate transporter 1:2,Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os11g18044.1 : peptide transporter PTR2, putative, expressed
MaizeGDB (Corn) Zm00025a012592
Brachypodium KQJ88780 , PNT63796 , PNT63799
Barley HORVU2Hr1G062730.11 , HORVU2Hr1G062730.12 , HORVU2Hr1G062730.2 , HORVU2Hr1G062730.3 , HORVU2Hr1G062730.1 , HORVU2Hr1G062730.6 , HORVU2Hr1G062730.7 , HORVU2Hr1G062730.4 , HORVU2Hr1G062730.5 , HORVU2Hr1G062730.8 , HORVU2Hr1G062730.9
Wheat TraesCS2A02G264500 , TraesCS2D02G259400 , TraesCS2D02G259400 , TraesCS2B02G277600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
2 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
3 Sobic.002G254900 membrane protein, putative, expressed -
4 Sobic.008G133000 expressed protein -
5 Sobic.003G287200 WRKY23, expressed -
6 Sobic.005G089200 gibberellin receptor GID1L2, putative, expressed -
7 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
8 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
9 Sobic.010G096700 leaf senescence related protein, putative, expressed -
10 Sobic.005G066300 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
11 Sobic.001G131001 - -
12 Sobic.010G274400 reticuline oxidase-like protein precursor, putative, expressed -
13 Sobic.005G149600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
14 Sobic.001G506600 exostosin family domain containing protein, expressed -
15 Sobic.004G034200 STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed -
16 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
17 Sobic.001G514700 "Cytochrome P450, family 78,"("PubMedID : 26759170,PubMedID : 24597475")@cytochrome P450, putative, expressed -
18 Sobic.002G411000 AP2 domain containing protein, expressed -
19 Sobic.010G220300 glucan endo-1,3-beta-glucosidase 12 precursor, putative, expressed -
20 Sobic.009G015166 - -


Gene co-expression network
sample Sobic005G107500 Sobic005G107500 Sobic001G002800 Sobic001G002800 Sobic005G107500--Sobic001G002800 Sobic006G117500 Sobic006G117500 Sobic005G107500--Sobic006G117500 Sobic002G254900 Sobic002G254900 Sobic005G107500--Sobic002G254900 Sobic008G133000 Sobic008G133000 Sobic005G107500--Sobic008G133000 Sobic003G287200 Sobic003G287200 Sobic005G107500--Sobic003G287200 Sobic005G089200 Sobic005G089200 Sobic005G107500--Sobic005G089200 Sobic005G104200 Sobic005G104200 Sobic005G107500--Sobic005G104200 Sobic001G503000 Sobic001G503000 Sobic005G107500--Sobic001G503000 Sobic010G096700 Sobic010G096700 Sobic005G107500--Sobic010G096700 Sobic001G002800--Sobic002G254900 Sobic001G002800--Sobic001G503000 Sobic007G090472 Sobic007G090472 Sobic001G002800--Sobic007G090472 Sobic001G002800--Sobic003G287200 Sobic001G002800--Sobic005G107500 Sobic006G209000 Sobic006G209000 Sobic001G002800--Sobic006G209000 Sobic001G002800--Sobic010G096700 Sobic007G073000 Sobic007G073000 Sobic001G002800--Sobic007G073000 Sobic001G506600 Sobic001G506600 Sobic001G002800--Sobic001G506600 Sobic006G117500--Sobic005G104200 Sobic010G274400 Sobic010G274400 Sobic006G117500--Sobic010G274400 Sobic004G108800 Sobic004G108800 Sobic006G117500--Sobic004G108800 Sobic006G117500--Sobic001G506600 Sobic009G015166 Sobic009G015166 Sobic006G117500--Sobic009G015166 Sobic005G066300 Sobic005G066300 Sobic006G117500--Sobic005G066300 Sobic006G117500--Sobic010G096700 Sobic006G205500 Sobic006G205500 Sobic006G117500--Sobic006G205500 Sobic002G163200 Sobic002G163200 Sobic006G117500--Sobic002G163200 Sobic002G254900--Sobic001G002800 Sobic002G254900--Sobic010G096700 Sobic010G180100 Sobic010G180100 Sobic002G254900--Sobic010G180100 Sobic004G047600 Sobic004G047600 Sobic002G254900--Sobic004G047600 Sobic001G360700 Sobic001G360700 Sobic002G254900--Sobic001G360700 Sobic002G254900--Sobic001G503000 Sobic002G254900--Sobic001G506600 Sobic002G254900--Sobic007G090472 Sobic002G167600 Sobic002G167600 Sobic002G254900--Sobic002G167600 Sobic008G133000--Sobic001G503000 Sobic008G133000--Sobic005G104200 Sobic004G248500 Sobic004G248500 Sobic008G133000--Sobic004G248500 Sobic005G115300 Sobic005G115300 Sobic008G133000--Sobic005G115300 Sobic001G131001 Sobic001G131001 Sobic008G133000--Sobic001G131001 Sobic008G133000--Sobic001G506600 Sobic008G133000--Sobic006G117500 Sobic001G348800 Sobic001G348800 Sobic008G133000--Sobic001G348800 Sobic008G133000--Sobic001G002800 Sobic006G183900 Sobic006G183900 Sobic003G287200--Sobic006G183900 Sobic006G229100 Sobic006G229100 Sobic003G287200--Sobic006G229100 Sobic003G287200--Sobic001G002800 Sobic001G360500 Sobic001G360500 Sobic003G287200--Sobic001G360500 Sobic003G287200--Sobic001G503000 Sobic003G287200--Sobic007G090472 Sobic003G287200--Sobic010G096700 Sobic007G170300 Sobic007G170300 Sobic003G287200--Sobic007G170300 Sobic003G287200--Sobic006G117500 Sobic005G149600 Sobic005G149600 Sobic005G089200--Sobic005G149600 Sobic005G089200--Sobic004G108800 Sobic001G026300 Sobic001G026300 Sobic005G089200--Sobic001G026300 Sobic005G152500 Sobic005G152500 Sobic005G089200--Sobic005G152500 Sobic003G015200 Sobic003G015200 Sobic005G089200--Sobic003G015200 Sobic005G089200--Sobic006G117500 Sobic010G170300 Sobic010G170300 Sobic005G089200--Sobic010G170300 Sobic007G156800 Sobic007G156800 Sobic005G089200--Sobic007G156800 Sobic004G034200 Sobic004G034200 Sobic005G089200--Sobic004G034200 Sobic001G238500 Sobic001G238500 Sobic005G104200--Sobic001G238500 Sobic005G104200--Sobic001G506600 Sobic002G019100 Sobic002G019100 Sobic005G104200--Sobic002G019100 Sobic005G104200--Sobic001G503000 Sobic005G104200--Sobic006G117500 Sobic004G126500 Sobic004G126500 Sobic005G104200--Sobic004G126500 Sobic006G009700 Sobic006G009700 Sobic005G104200--Sobic006G009700 Sobic002G411000 Sobic002G411000 Sobic005G104200--Sobic002G411000 Sobic005G104200--Sobic001G348800 Sobic001G503000--Sobic001G506600 Sobic001G503000--Sobic010G096700 Sobic001G503000--Sobic005G115300 Sobic003G215300 Sobic003G215300 Sobic001G503000--Sobic003G215300 Sobic001G503000--Sobic005G104200 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic010G082000 Sobic010G082000 Sobic001G503000--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G503000--Sobic004G322000 Sobic010G096700--Sobic001G506600 Sobic010G096700--Sobic001G503000 Sobic010G096700--Sobic006G209000 Sobic010G096700--Sobic004G322000 Sobic010G096700--Sobic003G215300 Sobic010G096700--Sobic005G104200 Sobic010G096700--Sobic005G066300 Sobic001G274400 Sobic001G274400 Sobic010G096700--Sobic001G274400 Sobic010G096700--Sobic005G115300
Octagon: transcription factors


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