Gene annotation
Transcriptome id Sobic.010G274400.1
Synonym
Functional annotation reticuline oxidase-like protein precursor, putative, expressed
UniProt A0A194YLT4
Pfam PF08031 PF01565
Panther DB PTHR32448 PTHR32448:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT4G20820 : FAD-binding Berberine family protein
RAP-DB (Rice) LOC_Os06g35560.1 : reticuline oxidase-like protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a042344 , Zm00025a051104 , Zm00025a051097
Brachypodium -
Barley HORVU2Hr1G122590.1 , HORVU1Hr1G092680.2 , HORVU1Hr1G092680.1 , HORVU7Hr1G089270.1 , HORVU4Hr1G017270.1
Wheat TraesCS1A02G424100 , TraesCS1B02G456900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G411000 AP2 domain containing protein, expressed -
2 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
4 Sobic.001G506600 exostosin family domain containing protein, expressed -
5 Sobic.005G066300 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
6 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
7 Sobic.010G096700 leaf senescence related protein, putative, expressed -
8 Sobic.006G108300 expressed protein -
9 Sobic.001G506700 exostosin family domain containing protein, expressed -
10 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
11 Sobic.001G263300 glycosyltransferase, putative, expressed K18207: POMGNT2, protein O-mannose beta-1,4-N-acetylglucosaminyltransferase
12 Sobic.008G035700 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
13 Sobic.003G140200 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
15 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
16 Sobic.001G514700 "Cytochrome P450, family 78,"("PubMedID : 26759170,PubMedID : 24597475")@cytochrome P450, putative, expressed -
17 Sobic.009G015166 - -
18 Sobic.006G009700 expressed protein -
19 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
20 Sobic.005G071700 expressed protein K13457: RPM1, disease resistance protein RPM1


Gene co-expression network
sample Sobic010G274400 Sobic010G274400 Sobic002G411000 Sobic002G411000 Sobic010G274400--Sobic002G411000 Sobic005G104200 Sobic005G104200 Sobic010G274400--Sobic005G104200 Sobic006G117500 Sobic006G117500 Sobic010G274400--Sobic006G117500 Sobic001G506600 Sobic001G506600 Sobic010G274400--Sobic001G506600 Sobic005G066300 Sobic005G066300 Sobic010G274400--Sobic005G066300 Sobic001G503000 Sobic001G503000 Sobic010G274400--Sobic001G503000 Sobic010G096700 Sobic010G096700 Sobic010G274400--Sobic010G096700 Sobic006G108300 Sobic006G108300 Sobic010G274400--Sobic006G108300 Sobic001G506700 Sobic001G506700 Sobic010G274400--Sobic001G506700 Sobic002G411000--Sobic005G066300 Sobic002G411000--Sobic006G108300 Sobic004G312500 Sobic004G312500 Sobic002G411000--Sobic004G312500 Sobic005G071900 Sobic005G071900 Sobic002G411000--Sobic005G071900 Sobic006G009700 Sobic006G009700 Sobic002G411000--Sobic006G009700 Sobic005G066500 Sobic005G066500 Sobic002G411000--Sobic005G066500 Sobic002G411000--Sobic001G506700 Sobic002G411000--Sobic001G506600 Sobic002G411000--Sobic010G274400 Sobic001G238500 Sobic001G238500 Sobic005G104200--Sobic001G238500 Sobic005G104200--Sobic001G506600 Sobic002G019100 Sobic002G019100 Sobic005G104200--Sobic002G019100 Sobic005G104200--Sobic001G503000 Sobic005G104200--Sobic006G117500 Sobic004G126500 Sobic004G126500 Sobic005G104200--Sobic004G126500 Sobic005G104200--Sobic006G009700 Sobic005G104200--Sobic002G411000 Sobic001G348800 Sobic001G348800 Sobic005G104200--Sobic001G348800 Sobic006G117500--Sobic005G104200 Sobic006G117500--Sobic010G274400 Sobic004G108800 Sobic004G108800 Sobic006G117500--Sobic004G108800 Sobic006G117500--Sobic001G506600 Sobic009G015166 Sobic009G015166 Sobic006G117500--Sobic009G015166 Sobic006G117500--Sobic005G066300 Sobic006G117500--Sobic010G096700 Sobic006G205500 Sobic006G205500 Sobic006G117500--Sobic006G205500 Sobic002G163200 Sobic002G163200 Sobic006G117500--Sobic002G163200 Sobic001G506600--Sobic010G096700 Sobic001G506600--Sobic001G503000 Sobic001G506600--Sobic005G104200 Sobic002G029600 Sobic002G029600 Sobic001G506600--Sobic002G029600 Sobic001G506600--Sobic002G411000 Sobic001G506600--Sobic002G019100 Sobic004G322000 Sobic004G322000 Sobic001G506600--Sobic004G322000 Sobic006G209000 Sobic006G209000 Sobic001G506600--Sobic006G209000 Sobic003G215300 Sobic003G215300 Sobic001G506600--Sobic003G215300 Sobic005G066300--Sobic002G411000 Sobic005G066300--Sobic004G312500 Sobic005G066300--Sobic001G506700 Sobic005G066300--Sobic005G071900 Sobic005G066300--Sobic010G096700 Sobic005G197350 Sobic005G197350 Sobic005G066300--Sobic005G197350 Sobic005G066300--Sobic006G209000 Sobic002G081850 Sobic002G081850 Sobic005G066300--Sobic002G081850 Sobic005G066300--Sobic005G066500 Sobic001G503000--Sobic001G506600 Sobic001G503000--Sobic010G096700 Sobic005G115300 Sobic005G115300 Sobic001G503000--Sobic005G115300 Sobic001G503000--Sobic003G215300 Sobic001G503000--Sobic005G104200 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic010G082000 Sobic010G082000 Sobic001G503000--Sobic010G082000 Sobic001G503000--Sobic004G322000 Sobic010G096700--Sobic001G506600 Sobic010G096700--Sobic001G503000 Sobic010G096700--Sobic006G209000 Sobic010G096700--Sobic004G322000 Sobic010G096700--Sobic003G215300 Sobic010G096700--Sobic005G104200 Sobic010G096700--Sobic005G066300 Sobic001G274400 Sobic001G274400 Sobic010G096700--Sobic001G274400 Sobic010G096700--Sobic005G115300 Sobic006G108300--Sobic004G312500 Sobic006G108300--Sobic005G071900 Sobic007G154100 Sobic007G154100 Sobic006G108300--Sobic007G154100 Sobic006G108300--Sobic002G411000 Sobic006G108300--Sobic006G009700 Sobic003G079100 Sobic003G079100 Sobic006G108300--Sobic003G079100 Sobic006G108300--Sobic006G209000 Sobic006G108300--Sobic002G029600 Sobic006G108300--Sobic002G019100 Sobic001G506700--Sobic002G411000 Sobic005G065700 Sobic005G065700 Sobic001G506700--Sobic005G065700 Sobic001G506700--Sobic002G019100 Sobic001G506700--Sobic005G071900 Sobic001G506700--Sobic001G506600 Sobic001G506700--Sobic006G209000 Sobic001G506700--Sobic006G009700 Sobic001G506700--Sobic005G066300 Sobic001G506700--Sobic001G503000
Octagon: transcription factors


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