Gene annotation
Transcriptome id Sobic.006G117500.1
Synonym PGIP1, Sb06g019870, ATPGIP1
Functional annotation polygalacturonase inhibitor 1 precursor, putative, expressed
UniProt A0A1Z5RDG7
Pfam -
Panther DB PTHR27000 PTHR27000:SF132
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06860 : polygalacturonase inhibiting protein 1
RAP-DB (Rice) LOC_Os09g31450.1 : polygalacturonase inhibitor 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a011023
Brachypodium KQJ83134
Barley HORVU2Hr1G082140.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.010G274400 reticuline oxidase-like protein precursor, putative, expressed -
3 Sobic.004G108800 cytochrome P450, putative, expressed -
4 Sobic.001G506600 exostosin family domain containing protein, expressed -
5 Sobic.009G015166 - -
6 Sobic.005G066300 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
7 Sobic.010G096700 leaf senescence related protein, putative, expressed -
8 Sobic.006G205500 glycosyl hydrolases family 16, putative, expressed -
9 Sobic.002G163200 - -
10 Sobic.005G089200 gibberellin receptor GID1L2, putative, expressed -
11 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
12 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
13 Sobic.005G149600 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@cytochrome P450, putative, expressed -
14 Sobic.008G035700 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
15 Sobic.002G411000 AP2 domain containing protein, expressed -
16 Sobic.002G235800 expressed protein -
17 Sobic.003G287200 WRKY23, expressed -
18 Sobic.004G156250 - -
19 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
20 Sobic.005G152500 - -


Gene co-expression network
sample Sobic006G117500 Sobic006G117500 Sobic005G104200 Sobic005G104200 Sobic006G117500--Sobic005G104200 Sobic010G274400 Sobic010G274400 Sobic006G117500--Sobic010G274400 Sobic004G108800 Sobic004G108800 Sobic006G117500--Sobic004G108800 Sobic001G506600 Sobic001G506600 Sobic006G117500--Sobic001G506600 Sobic009G015166 Sobic009G015166 Sobic006G117500--Sobic009G015166 Sobic005G066300 Sobic005G066300 Sobic006G117500--Sobic005G066300 Sobic010G096700 Sobic010G096700 Sobic006G117500--Sobic010G096700 Sobic006G205500 Sobic006G205500 Sobic006G117500--Sobic006G205500 Sobic002G163200 Sobic002G163200 Sobic006G117500--Sobic002G163200 Sobic001G238500 Sobic001G238500 Sobic005G104200--Sobic001G238500 Sobic005G104200--Sobic001G506600 Sobic002G019100 Sobic002G019100 Sobic005G104200--Sobic002G019100 Sobic001G503000 Sobic001G503000 Sobic005G104200--Sobic001G503000 Sobic005G104200--Sobic006G117500 Sobic004G126500 Sobic004G126500 Sobic005G104200--Sobic004G126500 Sobic006G009700 Sobic006G009700 Sobic005G104200--Sobic006G009700 Sobic002G411000 Sobic002G411000 Sobic005G104200--Sobic002G411000 Sobic001G348800 Sobic001G348800 Sobic005G104200--Sobic001G348800 Sobic010G274400--Sobic002G411000 Sobic010G274400--Sobic005G104200 Sobic010G274400--Sobic006G117500 Sobic010G274400--Sobic001G506600 Sobic010G274400--Sobic005G066300 Sobic010G274400--Sobic001G503000 Sobic010G274400--Sobic010G096700 Sobic006G108300 Sobic006G108300 Sobic010G274400--Sobic006G108300 Sobic001G506700 Sobic001G506700 Sobic010G274400--Sobic001G506700 Sobic005G149600 Sobic005G149600 Sobic004G108800--Sobic005G149600 Sobic005G089200 Sobic005G089200 Sobic004G108800--Sobic005G089200 Sobic007G156800 Sobic007G156800 Sobic004G108800--Sobic007G156800 Sobic004G108800--Sobic006G117500 Sobic004G156250 Sobic004G156250 Sobic004G108800--Sobic004G156250 Sobic003G015200 Sobic003G015200 Sobic004G108800--Sobic003G015200 Sobic004G108800--Sobic009G015166 Sobic005G152500 Sobic005G152500 Sobic004G108800--Sobic005G152500 Sobic007G038500 Sobic007G038500 Sobic004G108800--Sobic007G038500 Sobic001G506600--Sobic010G096700 Sobic001G506600--Sobic001G503000 Sobic001G506600--Sobic005G104200 Sobic002G029600 Sobic002G029600 Sobic001G506600--Sobic002G029600 Sobic001G506600--Sobic002G411000 Sobic001G506600--Sobic002G019100 Sobic004G322000 Sobic004G322000 Sobic001G506600--Sobic004G322000 Sobic006G209000 Sobic006G209000 Sobic001G506600--Sobic006G209000 Sobic003G215300 Sobic003G215300 Sobic001G506600--Sobic003G215300 Sobic009G015166--Sobic001G238500 Sobic009G015166--Sobic006G117500 Sobic009G015166--Sobic005G066300 Sobic009G015166--Sobic004G108800 Sobic009G015166--Sobic005G104200 Sobic009G015166--Sobic004G126500 Sobic009G015166--Sobic002G411000 Sobic009G015166--Sobic004G156250 Sobic009G015166--Sobic006G009700 Sobic005G066300--Sobic002G411000 Sobic004G312500 Sobic004G312500 Sobic005G066300--Sobic004G312500 Sobic005G066300--Sobic001G506700 Sobic005G071900 Sobic005G071900 Sobic005G066300--Sobic005G071900 Sobic005G066300--Sobic010G096700 Sobic005G197350 Sobic005G197350 Sobic005G066300--Sobic005G197350 Sobic005G066300--Sobic006G209000 Sobic002G081850 Sobic002G081850 Sobic005G066300--Sobic002G081850 Sobic005G066500 Sobic005G066500 Sobic005G066300--Sobic005G066500 Sobic010G096700--Sobic001G506600 Sobic010G096700--Sobic001G503000 Sobic010G096700--Sobic006G209000 Sobic010G096700--Sobic004G322000 Sobic010G096700--Sobic003G215300 Sobic010G096700--Sobic005G104200 Sobic010G096700--Sobic005G066300 Sobic001G274400 Sobic001G274400 Sobic010G096700--Sobic001G274400 Sobic005G115300 Sobic005G115300 Sobic010G096700--Sobic005G115300 Sobic008G077900 Sobic008G077900 Sobic006G205500--Sobic008G077900 Sobic006G205500--Sobic006G117500 Sobic003G001300 Sobic003G001300 Sobic006G205500--Sobic003G001300 Sobic006G205500--Sobic010G096700 Sobic006G205500--Sobic001G506600 Sobic002G239700 Sobic002G239700 Sobic006G205500--Sobic002G239700 Sobic005G222600 Sobic005G222600 Sobic006G205500--Sobic005G222600 Sobic008G035700 Sobic008G035700 Sobic006G205500--Sobic008G035700 Sobic006G205500--Sobic004G322000 Sobic002G163200--Sobic006G117500 Sobic002G163200--Sobic001G503000 Sobic002G163200--Sobic005G115300 Sobic002G163200--Sobic001G238500 Sobic002G163200--Sobic005G104200 Sobic003G287200 Sobic003G287200 Sobic002G163200--Sobic003G287200 Sobic002G163200--Sobic001G506600 Sobic002G163200--Sobic005G066300 Sobic002G163200--Sobic004G108800
Octagon: transcription factors


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