Gene annotation
Transcriptome id Sobic.002G235800.1
Synonym Sb02g027440
Functional annotation expressed protein
UniProt A0A1W0W5K8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os09g29870.1 : expressed protein
MaizeGDB (Corn) Zm00025a014139
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G066300 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
2 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
3 Sobic.002G411000 AP2 domain containing protein, expressed -
4 Sobic.010G096700 leaf senescence related protein, putative, expressed -
5 Sobic.009G015166 - -
6 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G506600 exostosin family domain containing protein, expressed -
8 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
9 Sobic.006G205500 glycosyl hydrolases family 16, putative, expressed -
10 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
11 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
12 Sobic.004G312500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@nitrate reductase, putative, expressed K10534: nitrate reductase (NAD(P)H)
13 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
14 Sobic.001G506700 exostosin family domain containing protein, expressed -
15 Sobic.006G009700 expressed protein -
16 Sobic.006G108300 expressed protein -
17 Sobic.005G053100 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
18 Sobic.008G138700 MLA12, putative, expressed -
19 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
20 Sobic.005G066500 glycine-rich cell wall structural protein 2 precursor, putative, expressed -


Gene co-expression network
sample Sobic002G235800 Sobic002G235800 Sobic005G066300 Sobic005G066300 Sobic002G235800--Sobic005G066300 Sobic006G117500 Sobic006G117500 Sobic002G235800--Sobic006G117500 Sobic002G411000 Sobic002G411000 Sobic002G235800--Sobic002G411000 Sobic010G096700 Sobic010G096700 Sobic002G235800--Sobic010G096700 Sobic009G015166 Sobic009G015166 Sobic002G235800--Sobic009G015166 Sobic005G104200 Sobic005G104200 Sobic002G235800--Sobic005G104200 Sobic001G506600 Sobic001G506600 Sobic002G235800--Sobic001G506600 Sobic001G238500 Sobic001G238500 Sobic002G235800--Sobic001G238500 Sobic006G205500 Sobic006G205500 Sobic002G235800--Sobic006G205500 Sobic005G066300--Sobic002G411000 Sobic004G312500 Sobic004G312500 Sobic005G066300--Sobic004G312500 Sobic001G506700 Sobic001G506700 Sobic005G066300--Sobic001G506700 Sobic005G071900 Sobic005G071900 Sobic005G066300--Sobic005G071900 Sobic005G066300--Sobic010G096700 Sobic005G197350 Sobic005G197350 Sobic005G066300--Sobic005G197350 Sobic006G209000 Sobic006G209000 Sobic005G066300--Sobic006G209000 Sobic002G081850 Sobic002G081850 Sobic005G066300--Sobic002G081850 Sobic005G066500 Sobic005G066500 Sobic005G066300--Sobic005G066500 Sobic006G117500--Sobic005G104200 Sobic010G274400 Sobic010G274400 Sobic006G117500--Sobic010G274400 Sobic004G108800 Sobic004G108800 Sobic006G117500--Sobic004G108800 Sobic006G117500--Sobic001G506600 Sobic006G117500--Sobic009G015166 Sobic006G117500--Sobic005G066300 Sobic006G117500--Sobic010G096700 Sobic006G117500--Sobic006G205500 Sobic002G163200 Sobic002G163200 Sobic006G117500--Sobic002G163200 Sobic002G411000--Sobic005G066300 Sobic006G108300 Sobic006G108300 Sobic002G411000--Sobic006G108300 Sobic002G411000--Sobic004G312500 Sobic002G411000--Sobic005G071900 Sobic006G009700 Sobic006G009700 Sobic002G411000--Sobic006G009700 Sobic002G411000--Sobic005G066500 Sobic002G411000--Sobic001G506700 Sobic002G411000--Sobic001G506600 Sobic002G411000--Sobic010G274400 Sobic010G096700--Sobic001G506600 Sobic001G503000 Sobic001G503000 Sobic010G096700--Sobic001G503000 Sobic010G096700--Sobic006G209000 Sobic004G322000 Sobic004G322000 Sobic010G096700--Sobic004G322000 Sobic003G215300 Sobic003G215300 Sobic010G096700--Sobic003G215300 Sobic010G096700--Sobic005G104200 Sobic010G096700--Sobic005G066300 Sobic001G274400 Sobic001G274400 Sobic010G096700--Sobic001G274400 Sobic005G115300 Sobic005G115300 Sobic010G096700--Sobic005G115300 Sobic009G015166--Sobic001G238500 Sobic009G015166--Sobic006G117500 Sobic009G015166--Sobic005G066300 Sobic009G015166--Sobic004G108800 Sobic009G015166--Sobic005G104200 Sobic004G126500 Sobic004G126500 Sobic009G015166--Sobic004G126500 Sobic009G015166--Sobic002G411000 Sobic004G156250 Sobic004G156250 Sobic009G015166--Sobic004G156250 Sobic009G015166--Sobic006G009700 Sobic005G104200--Sobic001G238500 Sobic005G104200--Sobic001G506600 Sobic002G019100 Sobic002G019100 Sobic005G104200--Sobic002G019100 Sobic005G104200--Sobic001G503000 Sobic005G104200--Sobic006G117500 Sobic005G104200--Sobic004G126500 Sobic005G104200--Sobic006G009700 Sobic005G104200--Sobic002G411000 Sobic001G348800 Sobic001G348800 Sobic005G104200--Sobic001G348800 Sobic001G506600--Sobic010G096700 Sobic001G506600--Sobic001G503000 Sobic001G506600--Sobic005G104200 Sobic002G029600 Sobic002G029600 Sobic001G506600--Sobic002G029600 Sobic001G506600--Sobic002G411000 Sobic001G506600--Sobic002G019100 Sobic001G506600--Sobic004G322000 Sobic001G506600--Sobic006G209000 Sobic001G506600--Sobic003G215300 Sobic001G238500--Sobic004G126500 Sobic001G238500--Sobic005G104200 Sobic001G238500--Sobic006G009700 Sobic002G238700 Sobic002G238700 Sobic001G238500--Sobic002G238700 Sobic001G238500--Sobic002G019100 Sobic001G238500--Sobic001G348800 Sobic001G238500--Sobic002G411000 Sobic001G238500--Sobic009G015166 Sobic001G238500--Sobic001G506700 Sobic008G077900 Sobic008G077900 Sobic006G205500--Sobic008G077900 Sobic006G205500--Sobic006G117500 Sobic003G001300 Sobic003G001300 Sobic006G205500--Sobic003G001300 Sobic006G205500--Sobic010G096700 Sobic006G205500--Sobic001G506600 Sobic002G239700 Sobic002G239700 Sobic006G205500--Sobic002G239700 Sobic005G222600 Sobic005G222600 Sobic006G205500--Sobic005G222600 Sobic008G035700 Sobic008G035700 Sobic006G205500--Sobic008G035700 Sobic006G205500--Sobic004G322000
Octagon: transcription factors


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