Gene annotation
Transcriptome id Sobic.006G205500.1
Synonym Sb06g027660, XTH16
Functional annotation glycosyl hydrolases family 16, putative, expressed
UniProt C5YFH4
Pfam PF06955 PF00722
Panther DB PTHR31062 PTHR31062:SF36
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016762; xyloglucan:xyloglucosyl transferase activity GO:0006073cellular glucan metabolic process GO:0005618cell wall GO:0005975carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G57550 : xyloglucan endotransglucosylase/hydrolase 25
RAP-DB (Rice) LOC_Os04g51450.1 : glycosyl hydrolases family 16, putative, expressed
MaizeGDB (Corn) Zm00025a018308 , Zm00025a009913 , Zm00025a018310 , Zm00025a054957 , Zm00025a009904
Brachypodium KQJ84415
Barley HORVU6Hr1G081590.1 , HORVU6Hr1G081590.3 , HORVU6Hr1G081590.2 , HORVU6Hr1G081590.5 , HORVU6Hr1G081590.4 , HORVU2Hr1G101240.4 , HORVU2Hr1G101240.2 , HORVU2Hr1G101240.3 , HORVU2Hr1G101240.1 , HORVU2Hr1G101160.3 , HORVU2Hr1G101160.2 , HORVU2Hr1G101160.1 , HORVU2Hr1G101160.7 , HORVU2Hr1G101160.6 , HORVU2Hr1G101160.5 , HORVU2Hr1G101160.4 , HORVU2Hr1G101170.1
Wheat TraesCS6D02G318500 , TraesCS2B02G454600 , TraesCS2B02G454600 , TraesCS2A02G433700 , TraesCS2D02G431700 , TraesCS2D02G431600 , TraesCS2B02G455400 , TraesCS2A02G433800 , TraesCS2D02G432100 , TraesCS2B02G454800 , TraesCS2A02G433600 , TraesCS7A02G427200 , TraesCS2D02G431800 , TraesCS2A02G434300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G077900 exostosin family domain containing protein, expressed -
2 Sobic.006G117500 polygalacturonase inhibitor 1 precursor, putative, expressed -
3 Sobic.003G001300 ZOS1-05 - C2H2 zinc finger protein, expressed -
4 Sobic.010G096700 leaf senescence related protein, putative, expressed -
5 Sobic.001G506600 exostosin family domain containing protein, expressed -
6 Sobic.002G239700 receptor-like protein kinase 2 precursor, putative, expressed -
7 Sobic.005G222600 RGH1A, putative, expressed K13457: RPM1, disease resistance protein RPM1
8 Sobic.008G035700 glycosyltransferase, putative, expressed K08238: xyloglucan 6-xylosyltransferase
9 Sobic.004G322000 hypro1, putative, expressed -
10 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
11 Sobic.003G140200 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.005G066300 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
13 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
14 Sobic.005G071700 expressed protein K13457: RPM1, disease resistance protein RPM1
15 Sobic.005G104200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.002G235800 expressed protein -
17 Sobic.002G019100 xyloglucan fucosyltransferase, putative, expressed K13681: xyloglucan fucosyltransferase
18 Sobic.007G154100 aspartic proteinase nepenthesin precursor, putative, expressed -
19 Sobic.002G411000 AP2 domain containing protein, expressed -
20 Sobic.001G506700 exostosin family domain containing protein, expressed -


Gene co-expression network
sample Sobic006G205500 Sobic006G205500 Sobic008G077900 Sobic008G077900 Sobic006G205500--Sobic008G077900 Sobic006G117500 Sobic006G117500 Sobic006G205500--Sobic006G117500 Sobic003G001300 Sobic003G001300 Sobic006G205500--Sobic003G001300 Sobic010G096700 Sobic010G096700 Sobic006G205500--Sobic010G096700 Sobic001G506600 Sobic001G506600 Sobic006G205500--Sobic001G506600 Sobic002G239700 Sobic002G239700 Sobic006G205500--Sobic002G239700 Sobic005G222600 Sobic005G222600 Sobic006G205500--Sobic005G222600 Sobic008G035700 Sobic008G035700 Sobic006G205500--Sobic008G035700 Sobic004G322000 Sobic004G322000 Sobic006G205500--Sobic004G322000 Sobic008G077900--Sobic003G001300 Sobic008G077900--Sobic005G222600 Sobic003G140200 Sobic003G140200 Sobic008G077900--Sobic003G140200 Sobic008G077900--Sobic004G322000 Sobic008G077900--Sobic002G239700 Sobic009G060700 Sobic009G060700 Sobic008G077900--Sobic009G060700 Sobic008G077900--Sobic006G205500 Sobic007G090600 Sobic007G090600 Sobic008G077900--Sobic007G090600 Sobic005G071700 Sobic005G071700 Sobic008G077900--Sobic005G071700 Sobic005G104200 Sobic005G104200 Sobic006G117500--Sobic005G104200 Sobic010G274400 Sobic010G274400 Sobic006G117500--Sobic010G274400 Sobic004G108800 Sobic004G108800 Sobic006G117500--Sobic004G108800 Sobic006G117500--Sobic001G506600 Sobic009G015166 Sobic009G015166 Sobic006G117500--Sobic009G015166 Sobic005G066300 Sobic005G066300 Sobic006G117500--Sobic005G066300 Sobic006G117500--Sobic010G096700 Sobic006G117500--Sobic006G205500 Sobic002G163200 Sobic002G163200 Sobic006G117500--Sobic002G163200 Sobic003G001300--Sobic008G077900 Sobic003G001300--Sobic009G060700 Sobic003G001300--Sobic005G222600 Sobic010G152500 Sobic010G152500 Sobic003G001300--Sobic010G152500 Sobic008G138700 Sobic008G138700 Sobic003G001300--Sobic008G138700 Sobic006G092100 Sobic006G092100 Sobic003G001300--Sobic006G092100 Sobic007G154100 Sobic007G154100 Sobic003G001300--Sobic007G154100 Sobic003G001300--Sobic004G322000 Sobic010G152300 Sobic010G152300 Sobic003G001300--Sobic010G152300 Sobic010G096700--Sobic001G506600 Sobic001G503000 Sobic001G503000 Sobic010G096700--Sobic001G503000 Sobic006G209000 Sobic006G209000 Sobic010G096700--Sobic006G209000 Sobic010G096700--Sobic004G322000 Sobic003G215300 Sobic003G215300 Sobic010G096700--Sobic003G215300 Sobic010G096700--Sobic005G104200 Sobic010G096700--Sobic005G066300 Sobic001G274400 Sobic001G274400 Sobic010G096700--Sobic001G274400 Sobic005G115300 Sobic005G115300 Sobic010G096700--Sobic005G115300 Sobic001G506600--Sobic010G096700 Sobic001G506600--Sobic001G503000 Sobic001G506600--Sobic005G104200 Sobic002G029600 Sobic002G029600 Sobic001G506600--Sobic002G029600 Sobic002G411000 Sobic002G411000 Sobic001G506600--Sobic002G411000 Sobic002G019100 Sobic002G019100 Sobic001G506600--Sobic002G019100 Sobic001G506600--Sobic004G322000 Sobic001G506600--Sobic006G209000 Sobic001G506600--Sobic003G215300 Sobic002G239700--Sobic008G077900 Sobic002G239700--Sobic005G222600 Sobic002G239700--Sobic006G205500 Sobic001G232000 Sobic001G232000 Sobic002G239700--Sobic001G232000 Sobic002G239700--Sobic005G071700 Sobic003G419300 Sobic003G419300 Sobic002G239700--Sobic003G419300 Sobic002G239700--Sobic003G001300 Sobic003G419400 Sobic003G419400 Sobic002G239700--Sobic003G419400 Sobic002G239700--Sobic009G060700 Sobic005G222600--Sobic009G060700 Sobic005G222600--Sobic003G001300 Sobic005G222600--Sobic008G077900 Sobic005G222600--Sobic008G138700 Sobic005G222600--Sobic005G071700 Sobic010G213600 Sobic010G213600 Sobic005G222600--Sobic010G213600 Sobic005G222600--Sobic010G152300 Sobic005G222600--Sobic006G092100 Sobic009G058400 Sobic009G058400 Sobic005G222600--Sobic009G058400 Sobic008G035700--Sobic010G096700 Sobic008G035700--Sobic006G117500 Sobic008G035700--Sobic001G506600 Sobic005G131200 Sobic005G131200 Sobic008G035700--Sobic005G131200 Sobic008G035700--Sobic006G205500 Sobic008G035700--Sobic010G274400 Sobic008G035700--Sobic003G140200 Sobic008G035700--Sobic001G503000 Sobic001G514700 Sobic001G514700 Sobic008G035700--Sobic001G514700 Sobic004G322000--Sobic007G090600 Sobic004G322000--Sobic003G215300 Sobic006G031100 Sobic006G031100 Sobic004G322000--Sobic006G031100 Sobic004G322000--Sobic003G140200 Sobic003G282300 Sobic003G282300 Sobic004G322000--Sobic003G282300 Sobic003G240400 Sobic003G240400 Sobic004G322000--Sobic003G240400 Sobic008G035800 Sobic008G035800 Sobic004G322000--Sobic008G035800 Sobic010G082000 Sobic010G082000 Sobic004G322000--Sobic010G082000 Sobic004G014600 Sobic004G014600 Sobic004G322000--Sobic004G014600
Octagon: transcription factors


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