Gene annotation
Transcriptome id Sobic.010G220300.1
Synonym
Functional annotation glucan endo-1,3-beta-glucosidase 12 precursor, putative, expressed
UniProt C5Z7M7
Pfam PF07983
Panther DB PTHR32227 PTHR32227:SF73
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G79480 : Carbohydrate-binding X8 domain superfamily protein
RAP-DB (Rice) LOC_Os06g45450.1 : glucan endo-1,3-beta-glucosidase 12 precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK17000
Barley -
Wheat TraesCS7A02G481700 , TraesCS7B02G384100 , TraesCS7D02G468800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G041600 - -
2 Sobic.007G020700 ACT domain containing protein, expressed -
3 Sobic.006G009500 down-regulated TF in developmental senescence(PubMedID : 27586543)@ZOS4-01 - C2H2 zinc finger protein, expressed -
4 Sobic.004G312500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@nitrate reductase, putative, expressed K10534: nitrate reductase (NAD(P)H)
5 Sobic.009G079900 endoglucanase precursor, putative, expressed -
6 Sobic.001G402400 expressed protein -
7 Sobic.005G219700 Leucine Rich Repeat family protein, expressed -
8 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
9 Sobic.008G133000 expressed protein -
10 Sobic.008G183100 expressed protein -
11 Sobic.002G376100 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
12 Sobic.003G052100 receptor-like protein kinase 2 precursor, putative, expressed -
13 Sobic.006G009700 expressed protein -
14 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
15 Sobic.003G287450 - -
16 Sobic.006G108300 expressed protein -
17 Sobic.002G411000 AP2 domain containing protein, expressed -
18 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
19 Sobic.001G238500 similar to Putative uncharacterized protein(PubMedID : 29862293)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
20 Sobic.001G067800 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family


Gene co-expression network
sample Sobic010G220300 Sobic010G220300 Sobic007G041600 Sobic007G041600 Sobic010G220300--Sobic007G041600 Sobic007G020700 Sobic007G020700 Sobic010G220300--Sobic007G020700 Sobic006G009500 Sobic006G009500 Sobic010G220300--Sobic006G009500 Sobic004G312500 Sobic004G312500 Sobic010G220300--Sobic004G312500 Sobic009G079900 Sobic009G079900 Sobic010G220300--Sobic009G079900 Sobic001G402400 Sobic001G402400 Sobic010G220300--Sobic001G402400 Sobic005G219700 Sobic005G219700 Sobic010G220300--Sobic005G219700 Sobic005G071900 Sobic005G071900 Sobic010G220300--Sobic005G071900 Sobic008G133000 Sobic008G133000 Sobic010G220300--Sobic008G133000 Sobic001G173700 Sobic001G173700 Sobic007G041600--Sobic001G173700 Sobic003G052100 Sobic003G052100 Sobic007G041600--Sobic003G052100 Sobic007G041600--Sobic010G220300 Sobic004G126500 Sobic004G126500 Sobic007G041600--Sobic004G126500 Sobic001G238500 Sobic001G238500 Sobic007G041600--Sobic001G238500 Sobic009G015166 Sobic009G015166 Sobic007G041600--Sobic009G015166 Sobic003G153100 Sobic003G153100 Sobic007G041600--Sobic003G153100 Sobic007G041600--Sobic009G079900 Sobic007G172500 Sobic007G172500 Sobic007G041600--Sobic007G172500 Sobic002G029600 Sobic002G029600 Sobic007G020700--Sobic002G029600 Sobic007G020700--Sobic005G071900 Sobic006G009700 Sobic006G009700 Sobic007G020700--Sobic006G009700 Sobic007G020700--Sobic004G312500 Sobic009G060700 Sobic009G060700 Sobic007G020700--Sobic009G060700 Sobic002G019100 Sobic002G019100 Sobic007G020700--Sobic002G019100 Sobic006G108300 Sobic006G108300 Sobic007G020700--Sobic006G108300 Sobic007G020700--Sobic009G079900 Sobic003G079100 Sobic003G079100 Sobic007G020700--Sobic003G079100 Sobic006G009500--Sobic010G220300 Sobic006G009500--Sobic003G052100 Sobic006G009500--Sobic001G402400 Sobic006G009500--Sobic006G108300 Sobic006G009500--Sobic004G312500 Sobic006G009500--Sobic007G041600 Sobic005G107500 Sobic005G107500 Sobic006G009500--Sobic005G107500 Sobic006G009500--Sobic007G020700 Sobic002G411000 Sobic002G411000 Sobic006G009500--Sobic002G411000 Sobic004G312500--Sobic005G071900 Sobic004G312500--Sobic006G108300 Sobic005G110511 Sobic005G110511 Sobic004G312500--Sobic005G110511 Sobic004G312500--Sobic006G009700 Sobic007G154100 Sobic007G154100 Sobic004G312500--Sobic007G154100 Sobic005G066500 Sobic005G066500 Sobic004G312500--Sobic005G066500 Sobic008G138700 Sobic008G138700 Sobic004G312500--Sobic008G138700 Sobic005G065700 Sobic005G065700 Sobic004G312500--Sobic005G065700 Sobic004G312500--Sobic002G411000 Sobic009G079900--Sobic009G060700 Sobic009G079900--Sobic007G020700 Sobic005G052700 Sobic005G052700 Sobic009G079900--Sobic005G052700 Sobic009G079900--Sobic002G029600 Sobic009G079900--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic009G079900--Sobic010G213600 Sobic004G008600 Sobic004G008600 Sobic009G079900--Sobic004G008600 Sobic001G274400 Sobic001G274400 Sobic009G079900--Sobic001G274400 Sobic009G079900--Sobic006G009700 Sobic003G270400 Sobic003G270400 Sobic001G402400--Sobic003G270400 Sobic001G402400--Sobic003G052100 Sobic002G275500 Sobic002G275500 Sobic001G402400--Sobic002G275500 Sobic003G296500 Sobic003G296500 Sobic001G402400--Sobic003G296500 Sobic001G402400--Sobic010G220300 Sobic008G014700 Sobic008G014700 Sobic001G402400--Sobic008G014700 Sobic005G057000 Sobic005G057000 Sobic001G402400--Sobic005G057000 Sobic002G376100 Sobic002G376100 Sobic001G402400--Sobic002G376100 Sobic001G402400--Sobic006G009500 Sobic003G001300 Sobic003G001300 Sobic005G219700--Sobic003G001300 Sobic002G003400 Sobic002G003400 Sobic005G219700--Sobic002G003400 Sobic005G219700--Sobic009G060700 Sobic006G224500 Sobic006G224500 Sobic005G219700--Sobic006G224500 Sobic008G077900 Sobic008G077900 Sobic005G219700--Sobic008G077900 Sobic004G322000 Sobic004G322000 Sobic005G219700--Sobic004G322000 Sobic001G506600 Sobic001G506600 Sobic005G219700--Sobic001G506600 Sobic005G219700--Sobic007G020700 Sobic005G219700--Sobic002G029600 Sobic005G071900--Sobic005G065700 Sobic005G071900--Sobic004G312500 Sobic005G071900--Sobic005G066500 Sobic005G071900--Sobic005G110511 Sobic005G071900--Sobic006G108300 Sobic005G071900--Sobic006G009700 Sobic005G071900--Sobic008G138700 Sobic005G071900--Sobic003G079100 Sobic005G071900--Sobic002G029600 Sobic001G503000 Sobic001G503000 Sobic008G133000--Sobic001G503000 Sobic005G104200 Sobic005G104200 Sobic008G133000--Sobic005G104200 Sobic004G248500 Sobic004G248500 Sobic008G133000--Sobic004G248500 Sobic005G115300 Sobic005G115300 Sobic008G133000--Sobic005G115300 Sobic001G131001 Sobic001G131001 Sobic008G133000--Sobic001G131001 Sobic008G133000--Sobic001G506600 Sobic006G117500 Sobic006G117500 Sobic008G133000--Sobic006G117500 Sobic001G348800 Sobic001G348800 Sobic008G133000--Sobic001G348800 Sobic001G002800 Sobic001G002800 Sobic008G133000--Sobic001G002800
Octagon: transcription factors


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