Gene annotation
Transcriptome id Sobic.001G067800.1
Synonym Sb01g006170, ZTP29
Functional annotation metal cation transporter, putative, expressed
UniProt C5WY90
Pfam PF02535
Panther DB PTHR11040 PTHR11040:SF63
NCBI CDD KOG2474; Zinc transporter and related ZIP domain-containing proteins
KEGG Orthology K07238; TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT3G20870 : ZIP metal ion transporter family
RAP-DB (Rice) LOC_Os08g01030.1 : metal cation transporter, putative, expressed
MaizeGDB (Corn) Zm00025a016648
Brachypodium KQJ94727 , PNT65344 , PNT66477
Barley -
Wheat TraesCS7B02G251700 , TraesCS7B02G251700 , TraesCS7B02G251700 , TraesCS7D02G347700 , TraesCS7D02G347700 , TraesCS7D02G347700 , TraesCS7A02G340000 , TraesCS7A02G340000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G219600 protein kinase domain containing protein, expressed -
2 Sobic.001G218500 MATH domain containing protein, expressed -
3 Sobic.003G255600 expressed protein -
4 Sobic.001G239200 hsp20/alpha crystallin family protein, putative, expressed -
5 Sobic.004G193500 expressed protein -
6 Sobic.009G079900 endoglucanase precursor, putative, expressed -
7 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
8 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
9 Sobic.003G020500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.004G014600 disease resistance protein RGA2, putative, expressed -
11 Sobic.005G219700 Leucine Rich Repeat family protein, expressed -
12 Sobic.001G274400 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
13 Sobic.003G287450 - -
14 Sobic.003G215300 pleiotropic drug resistance protein, putative, expressed -
15 Sobic.009G106500 PMR5, putative, expressed -
16 Sobic.001G272600 powdery mildew resistance protein PM3b, putative, expressed -
17 Sobic.006G031100 CAP (Cysteine-rich secretory proteins("PubMedID : 26759170,PubMedID : 24597475")@SCP-like extracellular protein, expressed -
18 Sobic.005G182800 NB-ARC domain containing protein, expressed -
19 Sobic.001G460400 expressed protein -
20 Sobic.007G073000 - -


Gene co-expression network
sample Sobic001G067800 Sobic001G067800 Sobic005G219600 Sobic005G219600 Sobic001G067800--Sobic005G219600 Sobic001G218500 Sobic001G218500 Sobic001G067800--Sobic001G218500 Sobic003G255600 Sobic003G255600 Sobic001G067800--Sobic003G255600 Sobic001G239200 Sobic001G239200 Sobic001G067800--Sobic001G239200 Sobic004G193500 Sobic004G193500 Sobic001G067800--Sobic004G193500 Sobic009G079900 Sobic009G079900 Sobic001G067800--Sobic009G079900 Sobic003G079100 Sobic003G079100 Sobic001G067800--Sobic003G079100 Sobic002G029600 Sobic002G029600 Sobic001G067800--Sobic002G029600 Sobic003G020500 Sobic003G020500 Sobic001G067800--Sobic003G020500 Sobic005G219600--Sobic001G067800 Sobic005G219600--Sobic001G218500 Sobic005G219600--Sobic001G239200 Sobic005G219600--Sobic003G020500 Sobic005G219600--Sobic003G255600 Sobic001G274400 Sobic001G274400 Sobic005G219600--Sobic001G274400 Sobic006G135300 Sobic006G135300 Sobic005G219600--Sobic006G135300 Sobic004G271800 Sobic004G271800 Sobic005G219600--Sobic004G271800 Sobic004G322000 Sobic004G322000 Sobic005G219600--Sobic004G322000 Sobic001G218500--Sobic003G020500 Sobic004G014600 Sobic004G014600 Sobic001G218500--Sobic004G014600 Sobic001G218500--Sobic003G079100 Sobic001G342000 Sobic001G342000 Sobic001G218500--Sobic001G342000 Sobic002G111900 Sobic002G111900 Sobic001G218500--Sobic002G111900 Sobic009G165100 Sobic009G165100 Sobic001G218500--Sobic009G165100 Sobic001G218500--Sobic002G029600 Sobic003G017601 Sobic003G017601 Sobic001G218500--Sobic003G017601 Sobic003G441601 Sobic003G441601 Sobic001G218500--Sobic003G441601 Sobic009G106500 Sobic009G106500 Sobic003G255600--Sobic009G106500 Sobic003G255600--Sobic001G342000 Sobic001G293100 Sobic001G293100 Sobic003G255600--Sobic001G293100 Sobic005G182900 Sobic005G182900 Sobic003G255600--Sobic005G182900 Sobic006G097900 Sobic006G097900 Sobic003G255600--Sobic006G097900 Sobic003G255600--Sobic004G014600 Sobic006G171100 Sobic006G171100 Sobic003G255600--Sobic006G171100 Sobic002G029500 Sobic002G029500 Sobic003G255600--Sobic002G029500 Sobic008G033100 Sobic008G033100 Sobic003G255600--Sobic008G033100 Sobic001G239200--Sobic005G219600 Sobic001G239200--Sobic006G135300 Sobic001G239200--Sobic001G274400 Sobic001G239200--Sobic004G014600 Sobic003G215300 Sobic003G215300 Sobic001G239200--Sobic003G215300 Sobic001G239200--Sobic001G067800 Sobic007G073000 Sobic007G073000 Sobic001G239200--Sobic007G073000 Sobic006G266800 Sobic006G266800 Sobic001G239200--Sobic006G266800 Sobic009G259800 Sobic009G259800 Sobic001G239200--Sobic009G259800 Sobic002G146000 Sobic002G146000 Sobic004G193500--Sobic002G146000 Sobic004G193500--Sobic001G274400 Sobic004G193500--Sobic007G073000 Sobic005G177400 Sobic005G177400 Sobic004G193500--Sobic005G177400 Sobic008G164450 Sobic008G164450 Sobic004G193500--Sobic008G164450 Sobic004G193500--Sobic003G255600 Sobic004G193500--Sobic006G135300 Sobic006G092700 Sobic006G092700 Sobic004G193500--Sobic006G092700 Sobic006G224500 Sobic006G224500 Sobic004G193500--Sobic006G224500 Sobic009G060700 Sobic009G060700 Sobic009G079900--Sobic009G060700 Sobic007G020700 Sobic007G020700 Sobic009G079900--Sobic007G020700 Sobic005G052700 Sobic005G052700 Sobic009G079900--Sobic005G052700 Sobic009G079900--Sobic002G029600 Sobic009G079900--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic009G079900--Sobic010G213600 Sobic004G008600 Sobic004G008600 Sobic009G079900--Sobic004G008600 Sobic009G079900--Sobic001G274400 Sobic006G009700 Sobic006G009700 Sobic009G079900--Sobic006G009700 Sobic003G079100--Sobic002G029600 Sobic003G079100--Sobic004G014600 Sobic005G065700 Sobic005G065700 Sobic003G079100--Sobic005G065700 Sobic003G079100--Sobic002G029500 Sobic005G182800 Sobic005G182800 Sobic003G079100--Sobic005G182800 Sobic003G079100--Sobic010G213600 Sobic003G079100--Sobic005G182900 Sobic010G152500 Sobic010G152500 Sobic003G079100--Sobic010G152500 Sobic005G071900 Sobic005G071900 Sobic003G079100--Sobic005G071900 Sobic002G029600--Sobic003G079100 Sobic006G031100 Sobic006G031100 Sobic002G029600--Sobic006G031100 Sobic002G029600--Sobic003G215300 Sobic002G029600--Sobic004G014600 Sobic002G029600--Sobic005G065700 Sobic002G029600--Sobic010G152500 Sobic002G029600--Sobic005G071900 Sobic007G090600 Sobic007G090600 Sobic002G029600--Sobic007G090600 Sobic001G506600 Sobic001G506600 Sobic002G029600--Sobic001G506600 Sobic003G020500--Sobic001G218500 Sobic003G020500--Sobic002G111900 Sobic003G020500--Sobic003G079100 Sobic002G391300 Sobic002G391300 Sobic003G020500--Sobic002G391300 Sobic003G020500--Sobic003G441601 Sobic003G020500--Sobic004G014600 Sobic002G289500 Sobic002G289500 Sobic003G020500--Sobic002G289500 Sobic003G020500--Sobic006G171100 Sobic003G020500--Sobic002G029500
Octagon: transcription factors


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