Gene annotation
Transcriptome id Sobic.003G287450.1
Synonym -
Functional annotation -
UniProt A0A1W0VZE4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G259100 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@auxin responsive protein, putative, expressed K14488: SAUR family protein
2 Sobic.001G503000 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
3 Sobic.005G115300 expressed protein -
4 Sobic.004G312200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@WRKY32, expressed -
5 Sobic.006G009700 expressed protein -
6 Sobic.005G071900 expressed protein K13457: RPM1, disease resistance protein RPM1
7 Sobic.001G218500 MATH domain containing protein, expressed -
8 Sobic.004G312500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@nitrate reductase, putative, expressed K10534: nitrate reductase (NAD(P)H)
9 Sobic.003G287400 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
10 Sobic.003G079100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@muconate cycloisomerase, putative, expressed -
11 Sobic.007G020700 ACT domain containing protein, expressed -
12 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
13 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase
14 Sobic.006G117600 Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed K01188: beta-glucosidase
15 Sobic.006G108300 expressed protein -
16 Sobic.001G067800 metal cation transporter, putative, expressed K07238: TC.ZIP, zupT, ZRT3, zinc transporter, ZIP family
17 Sobic.003G017601 - -
18 Sobic.006G209000 Protein transferase (Os)(PubMedID : 27208977)@transferase family domain containing protein, expressed -
19 Sobic.005G175900 expressed protein -
20 Sobic.002G238700 - -


Gene co-expression network
sample Sobic003G287450 Sobic003G287450 Sobic002G259100 Sobic002G259100 Sobic003G287450--Sobic002G259100 Sobic001G503000 Sobic001G503000 Sobic003G287450--Sobic001G503000 Sobic005G115300 Sobic005G115300 Sobic003G287450--Sobic005G115300 Sobic004G312200 Sobic004G312200 Sobic003G287450--Sobic004G312200 Sobic006G009700 Sobic006G009700 Sobic003G287450--Sobic006G009700 Sobic005G071900 Sobic005G071900 Sobic003G287450--Sobic005G071900 Sobic001G218500 Sobic001G218500 Sobic003G287450--Sobic001G218500 Sobic004G312500 Sobic004G312500 Sobic003G287450--Sobic004G312500 Sobic003G287400 Sobic003G287400 Sobic003G287450--Sobic003G287400 Sobic005G224200 Sobic005G224200 Sobic002G259100--Sobic005G224200 Sobic002G259100--Sobic001G503000 Sobic006G209000 Sobic006G209000 Sobic002G259100--Sobic006G209000 Sobic002G259100--Sobic005G115300 Sobic010G096700 Sobic010G096700 Sobic002G259100--Sobic010G096700 Sobic003G215300 Sobic003G215300 Sobic002G259100--Sobic003G215300 Sobic007G073000 Sobic007G073000 Sobic002G259100--Sobic007G073000 Sobic002G259100--Sobic004G312500 Sobic005G182800 Sobic005G182800 Sobic002G259100--Sobic005G182800 Sobic001G506600 Sobic001G506600 Sobic001G503000--Sobic001G506600 Sobic001G503000--Sobic010G096700 Sobic001G503000--Sobic005G115300 Sobic001G503000--Sobic003G215300 Sobic005G104200 Sobic005G104200 Sobic001G503000--Sobic005G104200 Sobic001G503000--Sobic006G209000 Sobic008G138900 Sobic008G138900 Sobic001G503000--Sobic008G138900 Sobic010G082000 Sobic010G082000 Sobic001G503000--Sobic010G082000 Sobic004G322000 Sobic004G322000 Sobic001G503000--Sobic004G322000 Sobic005G115300--Sobic001G503000 Sobic005G115300--Sobic004G312200 Sobic004G248500 Sobic004G248500 Sobic005G115300--Sobic004G248500 Sobic005G115300--Sobic005G104200 Sobic005G115300--Sobic001G506600 Sobic006G229100 Sobic006G229100 Sobic005G115300--Sobic006G229100 Sobic001G348800 Sobic001G348800 Sobic005G115300--Sobic001G348800 Sobic005G115300--Sobic010G096700 Sobic005G115300--Sobic010G082000 Sobic004G312200--Sobic005G115300 Sobic004G312200--Sobic001G503000 Sobic006G196400 Sobic006G196400 Sobic004G312200--Sobic006G196400 Sobic005G175900 Sobic005G175900 Sobic004G312200--Sobic005G175900 Sobic004G312200--Sobic010G082000 Sobic003G185300 Sobic003G185300 Sobic004G312200--Sobic003G185300 Sobic001G263300 Sobic001G263300 Sobic004G312200--Sobic001G263300 Sobic004G312200--Sobic003G215300 Sobic001G149400 Sobic001G149400 Sobic004G312200--Sobic001G149400 Sobic008G138700 Sobic008G138700 Sobic006G009700--Sobic008G138700 Sobic006G009700--Sobic004G312500 Sobic006G009700--Sobic005G071900 Sobic002G019100 Sobic002G019100 Sobic006G009700--Sobic002G019100 Sobic004G126500 Sobic004G126500 Sobic006G009700--Sobic004G126500 Sobic001G238500 Sobic001G238500 Sobic006G009700--Sobic001G238500 Sobic005G066500 Sobic005G066500 Sobic006G009700--Sobic005G066500 Sobic002G238700 Sobic002G238700 Sobic006G009700--Sobic002G238700 Sobic006G108300 Sobic006G108300 Sobic006G009700--Sobic006G108300 Sobic005G065700 Sobic005G065700 Sobic005G071900--Sobic005G065700 Sobic005G071900--Sobic004G312500 Sobic005G071900--Sobic005G066500 Sobic005G110511 Sobic005G110511 Sobic005G071900--Sobic005G110511 Sobic005G071900--Sobic006G108300 Sobic005G071900--Sobic006G009700 Sobic005G071900--Sobic008G138700 Sobic003G079100 Sobic003G079100 Sobic005G071900--Sobic003G079100 Sobic002G029600 Sobic002G029600 Sobic005G071900--Sobic002G029600 Sobic003G020500 Sobic003G020500 Sobic001G218500--Sobic003G020500 Sobic004G014600 Sobic004G014600 Sobic001G218500--Sobic004G014600 Sobic001G218500--Sobic003G079100 Sobic001G342000 Sobic001G342000 Sobic001G218500--Sobic001G342000 Sobic002G111900 Sobic002G111900 Sobic001G218500--Sobic002G111900 Sobic009G165100 Sobic009G165100 Sobic001G218500--Sobic009G165100 Sobic001G218500--Sobic002G029600 Sobic003G017601 Sobic003G017601 Sobic001G218500--Sobic003G017601 Sobic003G441601 Sobic003G441601 Sobic001G218500--Sobic003G441601 Sobic004G312500--Sobic005G071900 Sobic004G312500--Sobic006G108300 Sobic004G312500--Sobic005G110511 Sobic004G312500--Sobic006G009700 Sobic007G154100 Sobic007G154100 Sobic004G312500--Sobic007G154100 Sobic004G312500--Sobic005G066500 Sobic004G312500--Sobic008G138700 Sobic004G312500--Sobic005G065700 Sobic002G411000 Sobic002G411000 Sobic004G312500--Sobic002G411000 Sobic003G287400--Sobic003G287450 Sobic004G161900 Sobic004G161900 Sobic003G287400--Sobic004G161900 Sobic005G134600 Sobic005G134600 Sobic003G287400--Sobic005G134600 Sobic003G287400--Sobic004G312200 Sobic006G075600 Sobic006G075600 Sobic003G287400--Sobic006G075600 Sobic003G287400--Sobic001G503000 Sobic004G323900 Sobic004G323900 Sobic003G287400--Sobic004G323900 Sobic003G287400--Sobic001G218500 Sobic007G119800 Sobic007G119800 Sobic003G287400--Sobic007G119800
Octagon: transcription factors


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